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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036736 ID=TCONS_00036736|Name=TCONS_00036736|organism=Clytia hemisphaerica|type=transcript|length=2069bp
AAAGATATTCGCAATATATTTACGATAGCGCTCGCTGTGCTAATCATGTA
AAAACTAACTGCACACGGGtgtatttttaaaaagtcaGCCGACTCAAGGA
AGTGAAACctcacattttttaatttttttgatatttctacAAGTGATGCT
TCCAAATATAATGtcacaaattcaatttcattaatggctGATCCATCAta
tatatcaatattttgaatattttttgtaaccTTGTTTAAACCGCTTTTTA
GAAcgtgttaaaaatcacttgctccgGAAGCACCGGAAGAGCTCCGGAAC
TTTCCCCTGTCTGGAAATGGTGCACGATACTCCGAATATATTTGGCGTGA
GGCTCTAATTACTTTTGGCGTATTGGCGTAAGGAGCAGCTACAATGTAAG
ATATTGGCGTAAGTCTaaccttttcaaatttttattttcaggataACACA
CGACGACAGAACACAGGAGCACTCCTCGCCATTTTCGATAAGTTTATAGC
AAACAGCAATATTCGATTCATTCTTCTCAGTAATCCGTTGTTCACCCGAA
ATTCATCCGATTATAAATCTTAAGTCTAATACACAATGTTTATTTTACCA
AACAGTAGCGCATTTTCATTGGCAGTATACGCGGGATTTTTTCTCTTTCA
GCTTCTAGCAAAAAGTCGAACGCGGATGACAAAGCGGAAGAATGACACCA
CCCGCCTCAAAAACCACCCATCCGCCCGTGAGATCGCAGTTTACCGCTCG
CTTTTATCGTTTGCCTTTTATCTTTTAGCGCTGGATCATTTGGTCTGTAA
TTATTCTTTTAACATTTAAGGAGatctcattctttttttattaaattcgt
GAATCTCAAAGAAGTCAGACACTTCCTAGTCCCACAGCTAAAAAGTCCAA
CGCGACAGGGCAAATGAGGTTTATGCGGACTAGCAAGATAGATTGTCCAA
TTTAGCTTTCTTCCAAACAGTATTTATCAAATATGAgatatttttcaaga
tttttcaatCATAAAACCAGGAAAAATAGTCAATTCTAAACCAACTTTCA
GGCGTTAAAATGCTTAACATCCCAGGGTTTTCGGGGCTTCACCCGCTGAA
CCCCCACCCGGGCTCTGCCCCGGACCCGTTAGGGGGGCTAACAGCGCCCC
CTAAACCCCCCTGCTGAAAAAATCGTGCCTGCTGCGCTCTAATTTTTCCA
TCGTTCAAAAATTTCCGCCTACGCCGTAGCAATTCAATATCGTCTTTACG
TCTTTGGCATGTCCTTTGCACAAATTCCACACTGGAACTTTCCGGAGAGA
AAAAATatagtgtttttttagctgCGGAGCGCTGGGAGGGtcctttttta
taaatattgctggaaagctaagatctaAGATCACaggctttcttttagta
aaacTAGAACgcctttagcatacatagaaaaaaagttcgaagggttcaaa
gttcacggaaaaatgaaacatttggtttggcGTCAAcaaagggccattcc
agaatttgtctgtaacagggggcggacgacacaggatttccgagggcaaa
ggttttcaccaaaattcgaaattgagggtgagagaagaaaatgtatgaat
ttccaaggcaattgaactaaaaaagacaaaatagagtggaatttccgttg
cattttgatttttgcaaaagtacatagATTTTCAacggaatttccgacca
ccactggaaaaagaaaaattaaaaaatgcacgtcgtccgacgggggtata
caaaaattttctggaatggcccaaaaGTTGCGTGACCTCTGCTGGCTGGA
GTCGCTAGCATGATTGCatgaggaatttcaaaaattgaggcTTTTGgtgg
gaaaaatgaaaaaaaagttccaattttaGCTACCGACCGACCAGCTgacc
catttttcaaagcttctaggacacaaaccaaacaatcaatAATTGGGCCT
GACCTAAGTTCTTATTCTAATCCCCTGccctatagaccttttcgcctttc
catccgccatattgaattgtatgcaaaaattatggtggccgaattgctgt
ggtgaaattcccttagaaa Run BLAST on NCBI transcript from alignment at sc0001506:51148..53216 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036736 ID=TCONS_00036736|Name=TCONS_00036736|organism=Clytia hemisphaerica|type=transcript|length=2069bp|location=Sequence derived from alignment at sc0001506:51148..53216 (Clytia hemisphaerica)
tttctaagggaatttcaccacagcaattcggccaccataatttttgcata
caattcaatatggcggatggaaaggcgaaaaggtctatagggCAGGGGAT
TAGAATAAGAACTTAGGTCAGGCCCAATTattgattgtttggtttgtgtc
ctagaagctttgaaaaatgggtcAGCTGGTCGGTCGGTAGCtaaaattgg
aacttttttttcatttttcccacCAAAAgcctcaatttttgaaattcctc
atGCAATCATGCTAGCGACTCCAGCCAGCAGAGGTCACGCAACttttggg
ccattccagaaaatttttgtatacccccgtcggacgacgtgcatttttta
atttttctttttccagtggtggtcggaaattccgtTGAAAATctatgtac
ttttgcaaaaatcaaaatgcaacggaaattccactctattttgtcttttt
tagttcaattgccttggaaattcatacattttcttctctcaccctcaatt
tcgaattttggtgaaaacctttgccctcggaaatcctgtgtcgtccgccc
cctgttacagacaaattctggaatggccctttgTTGACgccaaaccaaat
gtttcatttttccgtgaactttgaacccttcgaactttttttctatgtat
gctaaaggcGTTCTAgttttactaaaagaaagcctGTGATCTtagatctt
agctttccagcaatatttataaaaaaggaCCCTCCCAGCGCTCCGcagct
aaaaaaacactatATTTTTTCTCTCCGGAAAGTTCCAGTGTGGAATTTGT
GCAAAGGACATGCCAAAGACGTAAAGACGATATTGAATTGCTACGGCGTA
GGCGGAAATTTTTGAACGATGGAAAAATTAGAGCGCAGCAGGCACGATTT
TTTCAGCAGGGGGGTTTAGGGGGCGCTGTTAGCCCCCCTAACGGGTCCGG
GGCAGAGCCCGGGTGGGGGTTCAGCGGGTGAAGCCCCGAAAACCCTGGGA
TGTTAAGCATTTTAACGCCTGAAAGTTGGTTTAGAATTGACTATTTTTCC
TGGTTTTATGattgaaaaatcttgaaaaatatcTCATATTTGATAAATAC
TGTTTGGAAGAAAGCTAAATTGGACAATCTATCTTGCTAGTCCGCATAAA
CCTCATTTGCCCTGTCGCGTTGGACTTTTTAGCTGTGGGACTAGGAAGTG
TCTGACTTCTTTGAGATTCacgaatttaataaaaaaagaatgagatCTCC
TTAAATGTTAAAAGAATAATTACAGACCAAATGATCCAGCGCTAAAAGAT
AAAAGGCAAACGATAAAAGCGAGCGGTAAACTGCGATCTCACGGGCGGAT
GGGTGGTTTTTGAGGCGGGTGGTGTCATTCTTCCGCTTTGTCATCCGCGT
TCGACTTTTTGCTAGAAGCTGAAAGAGAAAAAATCCCGCGTATACTGCCA
ATGAAAATGCGCTACTGTTTGGTAAAATAAACATTGTGTATTAGACTTAA
GATTTATAATCGGATGAATTTCGGGTGAACAACGGATTACTGAGAAGAAT
GAATCGAATATTGCTGTTTGCTATAAACTTATCGAAAATGGCGAGGAGTG
CTCCTGTGTTCTGTCGTCGTGTGTtatcctgaaaataaaaatttgaaaag
gttAGACTTACGCCAATATCTTACATTGTAGCTGCTCCTTACGCCAATAC
GCCAAAAGTAATTAGAGCCTCACGCCAAATATATTCGGAGTATCGTGCAC
CATTTCCAGACAGGGGAAAGTTCCGGAGCTCTTCCGGTGCTTCcggagca
agtgatttttaacacgTTCTAAAAAGCGGTTTAAACAAggttacaaaaaa
tattcaaaatattgatatataTGATGGATCagccattaatgaaattgaat
ttgtgaCATTATATTTGGAAGCATCACTTgtagaaatatcaaaaaaatta
aaaaatgtgagGTTTCACTTCCTTGAGTCGGCtgactttttaaaaataca
CCCGTGTGCAGTTAGTTTTTACATGATTAGCACAGCGAGCGCTATCGTAA
ATATATTGCGAATATCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036736-exon-sc0001506-1491911889:51148..53216 | TCONS_00036736-exon-sc0001506-1491911889:51148..53216 | Clytia hemisphaerica | exon |
| TCONS_00036736-exon-sc0001506-1510915933:51148..53216 | TCONS_00036736-exon-sc0001506-1510915933:51148..53216 | Clytia hemisphaerica | exon |
| TCONS_00036736-exon-sc0001506-1575043694:51148..53216 | TCONS_00036736-exon-sc0001506-1575043694:51148..53216 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001506 | supercontig | sc0001506:51148..53216 . |
Blast
The following BLAST results are available for this feature:
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