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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036691 ID=TCONS_00036691|Name=TCONS_00036691|organism=Clytia hemisphaerica|type=transcript|length=441bp
AACAGAATAGTTGcttgaaagaaaatgtcacgaAGGCTTTTCTGCGTTTC
AAGTGACTAGGATAGGGGAGCAATTCTGGGAGAAAGACGGAGAGCAACAA
AATATGTTTATCATAAACTTTTTGAGATCGTAAAGAGTTTCTCACGCTTT
GGTGTTTCTATCGATCGAGTTGTCtgccaaaaattttgttttttttgtta
tgGCATATCAAAGTCTAGattttatcGAAAACGCAATGCCCTTCTAAAAG
GCCACGAAGATGGGGCAACAGAGCGAAAGGGAGCAAAACAATGCAGCAGC
GAATATTATCATGCTGTTTTATGGATAAAGCGATTCGCTGATGATTGTGG
AGATGCTCCGCTGGCCTGGTATCCTGATTCTCGGGTCATACCAGCCTGTT
TTACCAAAAGACCTGTTTACAAGACATATAAAGAAGAAATT Run BLAST on NCBI transcript from alignment at sc0001499:39918..41601+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036691 ID=TCONS_00036691|Name=TCONS_00036691|organism=Clytia hemisphaerica|type=transcript|length=1684bp|location=Sequence derived from alignment at sc0001499:39918..41601+ (Clytia hemisphaerica)
AACAGAATAGTTGcttgaaagaaaatgtcacgaAGGCTTTTCTGCGTTTC
AAGTGACTAGGATAGGGGAGCAATTCTGGGAGAAAGACGGAGAGCAACAA
AATATGTTTATCATAAACTTTTTGAGATCGTAAAGAGTTTCTCACGCTTT
GGTGTTTCTATCGATCGAGTTGTCtgccaaaaattttgttttttttgtta
tgGCATATCAAAGTCTAGGTAACTTTcccattttatgtttttaaagtGAA
ATCTAATTTGACAAAGGAATTCGATAAAATCGTTGAAAAACTATAAatct
aaaatcaaatttcaactttcaacttataaaaaacttgaactaaacgcttt
tctttttataagaatagtgtttttttgGTTTCATGATAAATATAACTTTT
TGGTCGAAATCGTCCTAAATAcacggttttttttataataatatacttta
taagaatattcataatGAAATTGGCTTATTTCTTCTTCTGTTTAAACCAA
ATGATTTTAATATCACTCTTAACATTTTTCAGACTGAGAGTGAGAAAAAC
TTTAGAATATGTTATCAAGAATATCTTAGGATGATTTCGACCAAAGGCTT
AAGAATATTCCACGGTGATCTGGTGTTGGAAgtatgaaaaatcggggaaa
ctttgactctttttttttaataactcgAGTTTTAATAGCCGAACGAAGAT
GGAAATTTGTGTATATAGTGCAATTGATGTACGAAATAGACTAAAGTCTA
AAATTTCCGAAAACTATAATCAGGCTTCTTGAAAcagagcactttcgttt
tctcagatccctcaaaatccctagaaatcCCCTCTCAGATCCCGCAAATC
GGAATTCACATAATTCCGACTGTAGTGGTGCTACAGACCTAAAATTTTGA
CCGTAAGACCAGATCATAAATACAATAAggataaaacaaaaagtttttgt
tgattgataagtatttcaacaaaaattaaaattaatcgATATTTTGAATC
CGATAGCAGATCGCTGTGTTCATCATGAAACCAAAAATcgctattcttat
aaaaaagacgtgtTATGCTAAAACCATCTAATTGGTTGAAAGAGAAGAAC
AAGAAGAAATAATAAGCCAGTTGTTGAATCAGCTTGAGAAGATTTTAGAG
TCTCTTGacttatgatttttttatgaaatttgactttgaaaagATTTAAG
ATAACATTATTCTTAGGACATTCTTAACTTTtaggccaatttcatcatga
atattcttataaagtatattcttataaaaaaagcgtgtataaagCTTTAA
CATGCCTTTTTTCAATCTTATCGATTTTCCATTACGGTTattctttttag
attttatcGAAAACGCAATGCCCTTCTAAAAGGCCACGAAGATGGGGCAA
CAGAGCGAAAGGGAGCAAAACAATGCAGCAGCGAATATGTAAGTTTTTCA
GATTTCGTTATTATCATTGTTGTTATTTTAGCTGCTAAGAGAAAAGGTTC
CTCTTTCCCATGTACTATTTtacaaagaaatttattttatgcATTTTAGT
ATCATGCTGTTTTATGGATAAAGCGATTCGCTGATGATTGTGGAGATGCT
CCGCTGGCCTGGTATCCTGATTCTCGGGTCATACCAGCCTGTTTTACCAA
AAGACCTGTTTACAAGACATATAAAGAAGAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036691-exon-sc0001499-1491911889:39918..40135 | TCONS_00036691-exon-sc0001499-1491911889:39918..40135 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1510915933:39918..40135 | TCONS_00036691-exon-sc0001499-1510915933:39918..40135 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1575043694:39918..40135 | TCONS_00036691-exon-sc0001499-1575043694:39918..40135 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1491911889:41268..41355 | TCONS_00036691-exon-sc0001499-1491911889:41268..41355 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1510915933:41268..41355 | TCONS_00036691-exon-sc0001499-1510915933:41268..41355 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1575043694:41268..41355 | TCONS_00036691-exon-sc0001499-1575043694:41268..41355 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1491911889:41467..41601 | TCONS_00036691-exon-sc0001499-1491911889:41467..41601 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1510915933:41467..41601 | TCONS_00036691-exon-sc0001499-1510915933:41467..41601 | Clytia hemisphaerica | exon |
| TCONS_00036691-exon-sc0001499-1575043694:41467..41601 | TCONS_00036691-exon-sc0001499-1575043694:41467..41601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001499 | supercontig | sc0001499:39918..41601 + |
Blast
The following BLAST results are available for this feature:
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