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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036646 ID=TCONS_00036646|Name=TCONS_00036646|organism=Clytia hemisphaerica|type=transcript|length=1325bp
ctaaaaatggggttttctggactttgtgtgaaattgcttcattagttttt
tctaattttttggacTGTTCACTACAAtttcttactctcttgctacttgt
cctatttttatttgattctcatcatcaggtaggtccattcagcatgttgc
ttgttgtcaaacaaagaaaacaacTTAAAAATGGACCTTCTACTAAGGGT
CTTTGAGCTAAACCAACTAAGCTTGGCAGAAACTGTTTTTCAAGTTCCAA
GACCCAAGACCCGATGAGGAAATAATAAAAACTCATATATGCTTATACTG
TAAGCTTTAATTAAGAAAGGCCTGTTAGGCCAGATGTTTAATTAGCTTAA
TCTAGGTTAAGTACACTAGGTGTTCCAGATATTTTGCACTCAGTTTAAGA
TTAGAAAGTTACATAAGTGTGTTGTGTCAGGTAAGTTTACATGCTAATCA
GACTAGGTGATAGTGAAACTAGTTTGGTTAGAATAAAAGGTGATCATTGG
CAATTTAGGAAGGAAGCTGTTCACATTGTCTACTAGACTAAACAGGCTTC
TAAGATAGGTTAGGTTGACAGGCAGGCAGACAAGCAGACAGTCAGGCAGA
CAGTCAGGCAGACAGTCAGGCAGACAGTCAGACAGACAGACGGACAGACA
GAGAGACAGTTAGGCAGACAGACAGCTGGAAGGGTggaaattttctcatt
tttagacTCGTCGTACTCAGTCTCTTTGAATCAATTCTTCTAGTGTGATT
GGGAACTGGGACAGATTAAGCAAGGTTGAATCTAGGAGATTGTACTGTCA
CTTCAAGGCAGGTTCTTGAAGGCTTGACCTCTTTGTTGGGCTTTACTCGC
CTCATTTGCAAGGATGCATGTTGACAAAACAACATCAAACAAATCAACTG
AAACTAAAAAGCATTGGTGACTCTTCCTCCCCTCCccctttaaagaaaaa
gaacaaacaGAAAGTTATACATAAAAAGTCAATAAAATGAACCTTTAACC
TGAAACCCTGCCTACCAGTGACTCGGGCTTTAAGAGTATCTTACGACATT
CAAATATAAGCGAGTTCGTAGATAAAACAATCAGCTGGTTGAGCCAAATT
CACACCCGTGAGATACGTATCTGCAAAAAAACTAGTCTacatttatgaaa
aaaatacagAAAGAAAACACCTATGCTATATAGAGACAACAATATTAAGG
AAATTGTAACATAAACTAATATGCCCTTTATAGGTTGACTGACTTTGTTc
tgttattttttttgtcttaaaagAAGTTCAATCAAAAGATGTCTCTTAAG
TGATTTTGCGACGACATCAGCGACG Run BLAST on NCBI transcript from alignment at sc0001490:18276..19600 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036646 ID=TCONS_00036646|Name=TCONS_00036646|organism=Clytia hemisphaerica|type=transcript|length=1325bp|location=Sequence derived from alignment at sc0001490:18276..19600 (Clytia hemisphaerica)
CGTCGCTGATGTCGTCGCAAAATCACTTAAGAGACATCTTTTGATTGAAC
TTcttttaagacaaaaaaaataacagAACAAAGTCAGTCAACCTATAAAG
GGCATATTAGTTTATGTTACAATTTCCTTAATATTGTTGTCTCTATATAG
CATAGGTGTTTTCTTTctgtatttttttcataaatgtAGACTAGTTTTTT
TGCAGATACGTATCTCACGGGTGTGAATTTGGCTCAACCAGCTGATTGTT
TTATCTACGAACTCGCTTATATTTGAATGTCGTAAGATACTCTTAAAGCC
CGAGTCACTGGTAGGCAGGGTTTCAGGTTAAAGGTTCATTTTATTGACTT
TTTATGTATAACTTTCtgtttgttctttttctttaaagggGGAGGGGAGG
AAGAGTCACCAATGCTTTTTAGTTTCAGTTGATTTGTTTGATGTTGTTTT
GTCAACATGCATCCTTGCAAATGAGGCGAGTAAAGCCCAACAAAGAGGTC
AAGCCTTCAAGAACCTGCCTTGAAGTGACAGTACAATCTCCTAGATTCAA
CCTTGCTTAATCTGTCCCAGTTCCCAATCACACTAGAAGAATTGATTCAA
AGAGACTGAGTACGACGAgtctaaaaatgagaaaatttccACCCTTCCAG
CTGTCTGTCTGCCTAACTGTCTCTCTGTCTGTCCGTCTGTCTGTCTGACT
GTCTGCCTGACTGTCTGCCTGACTGTCTGCCTGACTGTCTGCTTGTCTGC
CTGCCTGTCAACCTAACCTATCTTAGAAGCCTGTTTAGTCTAGTAGACAA
TGTGAACAGCTTCCTTCCTAAATTGCCAATGATCACCTTTTATTCTAACC
AAACTAGTTTCACTATCACCTAGTCTGATTAGCATGTAAACTTACCTGAC
ACAACACACTTATGTAACTTTCTAATCTTAAACTGAGTGCAAAATATCTG
GAACACCTAGTGTACTTAACCTAGATTAAGCTAATTAAACATCTGGCCTA
ACAGGCCTTTCTTAATTAAAGCTTACAGTATAAGCATATATGAGTTTTTA
TTATTTCCTCATCGGGTCTTGGGTCTTGGAACTTGAAAAACAGTTTCTGC
CAAGCTTAGTTGGTTTAGCTCAAAGACCCTTAGTAGAAGGTCCATTTTTA
Agttgttttctttgtttgacaacaagcaacatgctgaatggacctacctg
atgatgagaatcaaataaaaataggacaagtagcaagagagtaagaaaTT
GTAGTGAACAgtccaaaaaattagaaaaaactaatgaagcaatttcacac
aaagtccagaaaaccccatttttag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036646-exon-sc0001490-1491911889:18276..19600 | TCONS_00036646-exon-sc0001490-1491911889:18276..19600 | Clytia hemisphaerica | exon |
| TCONS_00036646-exon-sc0001490-1510915933:18276..19600 | TCONS_00036646-exon-sc0001490-1510915933:18276..19600 | Clytia hemisphaerica | exon |
| TCONS_00036646-exon-sc0001490-1575043694:18276..19600 | TCONS_00036646-exon-sc0001490-1575043694:18276..19600 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001490 | supercontig | sc0001490:18276..19600 . |
Blast
The following BLAST results are available for this feature:
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