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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036642 ID=TCONS_00036642|Name=TCONS_00036642|organism=Clytia hemisphaerica|type=transcript|length=1132bp
CAGATTGGTAGTGATCATTGATATCATTTCTGTCCGAAAATTGTCtaaga
ttttcagaaaatccAATGATTGTTGTGTGTTTGTATGGTTTTTTAGTACT
GGGCCCCTTGACATGAGTAAAAGTGCAATTTGTGTTAAAACATTCACCTT
TTCTGATCAATGAAGAACACATACGTGGATGAAACATGTTGCATTTTGTG
CCAGCATTACAGCCTTTTGGGGATTTATTAATTACCATGTCTCAGTAACT
TGGTACAGATTTTTGGATGCTTGAATCGGCAATCTTTGCCTGTGATGCCA
TATTTACATTTTCCTTTCTTGTAAAAGTTACAAACTTTTTGTGAGTAAAA
TTTATGTTTTCGTCTTGACATGCCGGGCATAGATAACAAAGTCCAGGGAT
TTTAAAGATGAGATTACATAATTTCTCATGTTCATTCAAAAGATTCATGC
TCATCAGAAGTTTANNATCCGTAAGCAATTTTTGATAACGTCAGTAGGAG
CATTTTCCACAAGACCAGCAAGAGCTCTCTTCCAGGTTTCAATCACATTT
TCTGAAACATCACTACTTGGTACAGCGCCTGAACGTTGATTCAGTGACAT
GATGATGTACAAACCAGAGATTGAGAAAACTTAACTTGAGACGCTCGAAT
GTATTAAAGATTGGTTTCAAGTGGATCGTAAAGTAAGACAACAGGATAAT
AGATACCTGATCAGCTGCACATGGGAACCCAAATTCCTGCCATGCGCAGC
TGCTCCTCAGGATTTAGCAAAATGCCTGGGTGACCAGCCACAGGACCCTT
GGGATATATGATAATGACTGAAACGTTGGCTTGATAGGGAAgtaatgaaa
taattttataccTCAATAGTCCAGGGCTAACCTGGTGTGTAAAAGCTTGT
GGTCTTCAGTCTTTGATAGCGAGAACAAGATTGATTTGTGTCATCCAGTA
GTGAGAAGATGTTGATATCACCAGAGTTGACCAAACAAAAATTACAGCCA
CTAAATAAGTATTACTCAGTGGGTAGGGCTACATTAAAGCAAAAAGCTTT
CCGGGCACCcgtttttgtattatttttatattgtttcttctttctttctg
gtattatttctatttttaccttagacttattc Run BLAST on NCBI transcript from alignment at sc0001488:40300..41431 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036642 ID=TCONS_00036642|Name=TCONS_00036642|organism=Clytia hemisphaerica|type=transcript|length=1132bp|location=Sequence derived from alignment at sc0001488:40300..41431 (Clytia hemisphaerica)
gaataagtctaaggtaaaaatagaaataataccagaaagaaagaagaaac
aatataaaaataatacaaaaacgGGTGCCCGGAAAGCTTTTTGCTTTAAT
GTAGCCCTACCCACTGAGTAATACTTATTTAGTGGCTGTAATTTTTGTTT
GGTCAACTCTGGTGATATCAACATCTTCTCACTACTGGATGACACAAATC
AATCTTGTTCTCGCTATCAAAGACTGAAGACCACAAGCTTTTACACACCA
GGTTAGCCCTGGACTATTGAggtataaaattatttcattacTTCCCTATC
AAGCCAACGTTTCAGTCATTATCATATATCCCAAGGGTCCTGTGGCTGGT
CACCCAGGCATTTTGCTAAATCCTGAGGAGCAGCTGCGCATGGCAGGAAT
TTGGGTTCCCATGTGCAGCTGATCAGGTATCTATTATCCTGTTGTCTTAC
TTTACGATCCACTTGAAACCAATCTTTAATACATTCGAGCGTCTCAAGTT
AAGTTTTCTCAATCTCTGGTTTGTACATCATCATGTCACTGAATCAACGT
TCAGGCGCTGTACCAAGTAGTGATGTTTCAGAAAATGTGATTGAAACCTG
GAAGAGAGCTCTTGCTGGTCTTGTGGAAAATGCTCCTACTGACGTTATCA
AAAATTGCTTACGGATNNTAAACTTCTGATGAGCATGAATCTTTTGAATG
AACATGAGAAATTATGTAATCTCATCTTTAAAATCCCTGGACTTTGTTAT
CTATGCCCGGCATGTCAAGACGAAAACATAAATTTTACTCACAAAAAGTT
TGTAACTTTTACAAGAAAGGAAAATGTAAATATGGCATCACAGGCAAAGA
TTGCCGATTCAAGCATCCAAAAATCTGTACCAAGTTACTGAGACATGGTA
ATTAATAAATCCCCAAAAGGCTGTAATGCTGGCACAAAATGCAACATGTT
TCATCCACGTATGTGTTCTTCATTGATCAGAAAAGGTGAATGTTTTAACA
CAAATTGCACTTTTACTCATGTCAAGGGGCCCAGTACTAAAAAACCATAC
AAACACACAACAATCATTggattttctgaaaatcttaGACAATTTTCGGA
CAGAAATGATATCAATGATCACTACCAATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036642-exon-sc0001488-1491911889:40300..41431 | TCONS_00036642-exon-sc0001488-1491911889:40300..41431 | Clytia hemisphaerica | exon |
| TCONS_00036642-exon-sc0001488-1510915933:40300..41431 | TCONS_00036642-exon-sc0001488-1510915933:40300..41431 | Clytia hemisphaerica | exon |
| TCONS_00036642-exon-sc0001488-1575043694:40300..41431 | TCONS_00036642-exon-sc0001488-1575043694:40300..41431 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001488 | supercontig | sc0001488:40300..41431 . |
Blast
The following BLAST results are available for this feature:
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