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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036641 ID=TCONS_00036641|Name=TCONS_00036641|organism=Clytia hemisphaerica|type=transcript|length=4504bp
atttgaacataaaaaatagctttcttcatatttttcaggttaaaaaaaga
aaatggcgcattctttagaaataaagaagagTCGCGCCATATTTGATTCA
AAACATCTATCAGTATCCAAGACACATCAAGCACCGTGCATCAAAGATTT
TGATATTATCAAGCCCATAAGTCGAGGGGCTTTTGGTCAAGTTTATTTGG
CCAAAAAGAAGATTTCATCTCGATTGTTTGCTTTGAAAGCAATGAAAAAG
AAAGACGTTTTGAATAAGAATATGATGGATCAAGTGGTAGCTGAACGTGA
CGCTTTGGCAATCTCATCCAAGAGCCCTTTTGTGGTGCAGCTCTTTTATT
CCTTTCAATCTAACGAGAAAATCTTCTTAGTGATGGAGTATATGATCGGT
GGAGACGTCAAATCACTTTTACATAATTTGGGTTATTTCCAAGAAGAGAT
GGCTTTGTTTTACGTGGCTGAGATGACATTAGCTCTTGAATATCTCCATA
AGCATTCAATTATACATCGAGATATCAAACCAGATAATTTGTTATTATCA
AGCACTGGTCATATTAAACTAACAGATTTTGGACTGTCTTATTTCACAGA
ATTGCGTAAACCtaattttcatgatttattGAACACGCCAGGTAATATCA
GTTTGAAAGGTAAAATTTTCTGGCGAACACCAGGACAGTTGCAATCATTG
ACAAGCAAGTTTACATTTTCAGCACCACGCCCAAAGACTGAAGCAAGAGC
ACATAGTGTTATGACAAAATCAAGAAGGGACTCAATAACCTCTTTATCTC
AATTAAATGAAAGTGACTTTATGTTTAGTTCACCACAAGATTGTACAATA
TCTCGAAGTAAAAGTATTTTTAATCCGATTTTATCAACACCCTTAGCTGC
AAAAACAATAGCTTCCACTCCAAATATCGGAGAAGTATCGAGTAAACTGG
CTGGCACCGCTAAATCCAACTTAACTGAAGACATTGAAATCTTAACCATA
CAATCACGAATGAGAAAAAGAAGTTTTCATGATATGAGAGACGAAAGCAC
CCTTGAAGATGATACTGAGAAGGAGAACTTCGATGATTCCAAATCCAAGC
GATTGCGCGTATTCCCTTCCTCACACAGTAGTTTGCCATCGGAAATTAAC
CTCTCAGTTGTGGACATGAGTACTAGTTTTTCAACAACAGAAAAGCAACC
ACAGCAACAAGCAGTGAAAAAGAATTTTGTACAATTTCATGATGAGGTTC
AGCATTTTAGTCACCATGGTAATGAATTTAGTCTTGATAACCCGTCTATT
GATCTTTCTACTGATAACTTGAACGATACCTCAGGTGCTTCAAACCAAGA
AAACAACATCAGTGGTGTAACAGCACTAACTGATACCAGTCACATGAGCA
TAAGTATCAACAAAGATTTTGATTCGTCCTTAACTAAATTCACCCCATCG
CCTCAACCCAAATCTCTATGCGCCAAAGATGTGTCACCCTCATTGACACC
TAAAAACGCAAGTCAAAGTAAATACCGAACAAACATTAAAACTACTCCAA
TGCAAGTTTTATTTGTTGACGATAGTGACACGTCAGCCAATCTGATTGAT
CCCCATCCGACCAAACGTCTCCTATCAGTATCAGATACGTCAATAAATGT
ATCCACGTCCTTACAAAAAACACCAGACGGAGCTCCTTTTAAAACTCCTG
ATGGGGAACCATTCATCCCTGGTGCATCTCCATTATCCATGAAAACACCA
AGTCAAACACCATTTCGAACACCGAAAACATGCATACGTGGTAAAGCAAC
ACCTGCACAGAAACGAAAGATTCTTGGAACGCCTGACTATCTATCACCGG
AAATTTTACTGGGTCGAGATTACAATGAATCAGTTGACTGGTGGGCTGTT
GGTGTTTGTTTTTATGAGTTTATGACTGGCATTCCGCCGTTTAATGATGA
TACACCTGAACTCGTTTTTGAACATATCCTTGATCGTGATTTATTATGGC
CCGAGGGAGAAGAAGCTCTTTCAGAACCTACTGTTGTTGCTATTGAACGT
TTCTTGACTGTAGACCCAGATAAACGTCCTAAAGCAGACGAAGTGAAGAC
AATGGACTGTTTTGGATCGATTGATTGGAATGATATTCATAACCAACAAG
CTCCTTTTGTACCACAGCCAGATGATAATTATGATACTACTTATTTCAAT
GCTAAAAACCTGGCCAATCATTTACATATGTCTGAATTTGATGGTTCTTG
AATGTTGTAtatttgttgaatattttttgttacAACCATTATAGTTGCAA
TTTTAGGACTATTAAAGTTGTTACCTAGCTAAATgcgatatttatttatt
ttattaatatctTCTTTTTTCCATGATGAGCTGAAACTAAACAACGGCAT
GTATCAGTACTTTGTAGCGAATTTCGATTTTAGACACCACCCCACCCATA
TAGTACAAAAACTGCAATAcactatccagcaaactcccaaatatACCCCA
ATACCCCNGCGAATTTCGATTTTAGACACCACCCCACCCATATAGTACAA
AAACTGCAATAcactatccagcaaactcccaaatatACCCCAATACCCCA
AATATACCCCAATGCCCCCTGTTTAGTACAaaatactatccagcaaactc
ccaaatatACCCCAATACCCCCTGTTTAGTACAAAATACTATGcagcaaa
ctcccaaatatACCCCAATACCCCCTGTATAGTACAAAAATACCAAGcag
caaactcccaaatatACCCCAATACCCCCTGTTTAGTACAAAAATACNTG
TTTAGTACAAAATACTATGcagcaaactcccaaatatACCCCAATACCCC
CTGTATAGTACAAAAATACCAAGcagcaaactcccaaatatACCCCAATA
CCCCCTGTTTATTACACAGATACCaaacagcaaaatttttttcataacac
ccacccaccccatgaTACATGCCGCTTTTTGTACATAGACCCCCCCCTGC
TTGGTATTAGGTTTTTAATCCTTTTAAATCATTTGAGCTTCTTTTTCTGA
GTCTCTGCAGCCATGTGAAGAACTTAAAAATGAGCTTCCTGAAAGAACTT
GCTGACTTAAATACTTCAAAATGAACTATCTGACAGAATTATCATCAATC
TTTAGCAATTTTGAAATAGAACAACTCAACGAGGATTTCTTCTTTTAAAA
TAACAGGACTTTAAAGGCATCGTCGTAGTCATTGCTTTAGATGTTTTATT
TTGAATTATCATTTGAGCATATGTGCTTCAAAAATGATTTCTGCTGTGAA
AGCAAATCACACATGAGCTTCTCAAAATTTGGTATTATTCACTTATGATT
GATTTTCATGTAGCTTTCAGTTTGTTATGACCATTAAGGTAATGAATATA
AATGGAGTGAAAACGTCTCGGTAATGACCTAACTGGTCGTTCAAATCTTT
TATAAATTCATTCATAGCGACTTTCGTTTGATGTACGATCATATGAGGTA
AAGAAATTTAATTTACATATTTTTTACATGTTATCTTTTCAAAATGAAGC
ACAAAATCGCTCTTATTCAAATTCTACTCGGGAAAGTTATGGCATGTCTC
AAAAACTGAAAATTACCATAATTTTTAGATCGCATTAGTCGACAGAAAAT
GACCAAACAAACGACTGAACCTGGGGTGTAAACAAATGATTTTTGCGAAA
AACCGCAAAAACTGATTATGACGTCTCAATCGATGACATCATAAAaacta
aaaattgcatttctcaagaatggttcattcaattactttcaaattttagt
acaataatgaccggttagcgAGGGCTGTACTGAGTACAGGGATGTGtaat
agcggagctggatagcgcacatttgaaaaagccttgttcgATCTCTGtac
cctgacattaaaatttgatgtgaaatttaacttttttaattacaaactcg
tgaaattcgGATTTTCTCTTAGNCAGGGATGTGtaatagcggagctggat
agcgcacatttgaaaaagccttgttcgATCTCTGtaccctgacattaaaa
tttgatatgaaatttaactttttcgatTACAAACTCGTGAGATTCGGATT
Ttctcttagccaatgattctgctgctgcatttatccttcacgattaaaaa
cttttaattatcaagaggttctgtaaaacattggtgaatgacaatttaaa
aaaatgaaaagcattgttttcattagtaaagttataagaaatttcttctg
taagattataaatagcactttttcatttgaaataccgcgttACACCgtgg
ggtgcctcactttctaactgatattttcagatagcgaTTCGGTATGTCTT
ATTATGGAAAAattcaattgaaacaatatttgtcaaaatattcacatccg
aattttttaaagaggaatcatgaaagcttctcaaattcataacacacacT
GATAagattagatttcatttacaaggaagctatTGGTATTGGGGTATCTt
ctgc Run BLAST on NCBI protein sequence of TCONS_00036641-protein >TCONS_00036641-protein ID=TCONS_00036641-protein|Name=TCONS_00036641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MAHSLEIKKSRAIFDSKHLSVSKTHQAPCIKDFDIIKPISRGAFGQVYLA
KKKISSRLFALKAMKKKDVLNKNMMDQVVAERDALAISSKSPFVVQLFYS
FQSNEKIFLVMEYMIGGDVKSLLHNLGYFQEEMALFYVAEMTLALEYLHK
HSIIHRDIKPDNLLLSSTGHIKLTDFGLSYFTELRKPNFHDLLNTPGNIS
LKGKIFWRTPGQLQSLTSKFTFSAPRPKTEARAHSVMTKSRRDSITSLSQ
LNESDFMFSSPQDCTISRSKSIFNPILSTPLAAKTIASTPNIGEVSSKLA
GTAKSNLTEDIEILTIQSRMRKRSFHDMRDESTLEDDTEKENFDDSKSKR
LRVFPSSHSSLPSEINLSVVDMSTSFSTTEKQPQQQAVKKNFVQFHDEVQ
HFSHHGNEFSLDNPSIDLSTDNLNDTSGASNQENNISGVTALTDTSHMSI
SINKDFDSSLTKFTPSPQPKSLCAKDVSPSLTPKNASQSKYRTNIKTTPM
QVLFVDDSDTSANLIDPHPTKRLLSVSDTSINVSTSLQKTPDGAPFKTPD
GEPFIPGASPLSMKTPSQTPFRTPKTCIRGKATPAQKRKILGTPDYLSPE
ILLGRDYNESVDWWAVGVCFYEFMTGIPPFNDDTPELVFEHILDRDLLWP
EGEEALSEPTVVAIERFLTVDPDKRPKADEVKTMDCFGSIDWNDIHNQQA
PFVPQPDDNYDTTYFNAKNLANHLHMSEFDGS Run BLAST on NCBI transcript from alignment at sc0001488:21998..26501 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036641 ID=TCONS_00036641|Name=TCONS_00036641|organism=Clytia hemisphaerica|type=transcript|length=4504bp|location=Sequence derived from alignment at sc0001488:21998..26501 (Clytia hemisphaerica)
gcagaAGATACCCCAATACCAatagcttccttgtaaatgaaatctaatct
TATCAgtgtgtgttatgaatttgagaagctttcatgattcctctttaaaa
aattcggatgtgaatattttgacaaatattgtttcaattgaatTTTTCCA
TAATAAGACATACCGAAtcgctatctgaaaatatcagttagaaagtgagg
caccccacGGTGTaacgcggtatttcaaatgaaaaagtgctatttataat
cttacagaagaaatttcttataactttactaatgaaaacaatgcttttca
tttttttaaattgtcattcaccaatgttttacagaacctcttgataatta
aaagtttttaatcgtgaaggataaatgcagcagcagaatcattggctaag
agaAAATCCGAATCTCACGAGTTTGTAatcgaaaaagttaaatttcatat
caaattttaatgtcagggtaCAGAGATcgaacaaggctttttcaaatgtg
cgctatccagctccgctattaCACATCCCTGNCTAAGAGAAAATCcgaat
ttcacgagtttgtaattaaaaaagttaaatttcacatcaaattttaatgt
cagggtaCAGAGATcgaacaaggctttttcaaatgtgcgctatccagctc
cgctattaCACATCCCTGTACTCAGTACAGCCCTcgctaaccggtcatta
ttgtactaaaatttgaaagtaattgaatgaaccattcttgagaaatgcaa
tttttagttTTTATGATGTCATCGATTGAGACGTCATAATCAGTTTTTGC
GGTTTTTCGCAAAAATCATTTGTTTACACCCCAGGTTCAGTCGTTTGTTT
GGTCATTTTCTGTCGACTAATGCGATCTAAAAATTATGGTAATTTTCAGT
TTTTGAGACATGCCATAACTTTCCCGAGTAGAATTTGAATAAGAGCGATT
TTGTGCTTCATTTTGAAAAGATAACATGTAAAAAATATGTAAATTAAATT
TCTTTACCTCATATGATCGTACATCAAACGAAAGTCGCTATGAATGAATT
TATAAAAGATTTGAACGACCAGTTAGGTCATTACCGAGACGTTTTCACTC
CATTTATATTCATTACCTTAATGGTCATAACAAACTGAAAGCTACATGAA
AATCAATCATAAGTGAATAATACCAAATTTTGAGAAGCTCATGTGTGATT
TGCTTTCACAGCAGAAATCATTTTTGAAGCACATATGCTCAAATGATAAT
TCAAAATAAAACATCTAAAGCAATGACTACGACGATGCCTTTAAAGTCCT
GTTATTTTAAAAGAAGAAATCCTCGTTGAGTTGTTCTATTTCAAAATTGC
TAAAGATTGATGATAATTCTGTCAGATAGTTCATTTTGAAGTATTTAAGT
CAGCAAGTTCTTTCAGGAAGCTCATTTTTAAGTTCTTCACATGGCTGCAG
AGACTCAGAAAAAGAAGCTCAAATGATTTAAAAGGATTAAAAACCTAATA
CCAAGCAGGGGGGGGTCTATGTACAAAAAGCGGCATGTAtcatggggtgg
gtgggtgttatgaaaaaaattttgctgtttGGTATCTGTGTAATAAACAG
GGGGTATTGGGGTatatttgggagtttgctgCTTGGTATTTTTGTACTAT
ACAGGGGGTATTGGGGTatatttgggagtttgctgCATAGTATTTTGTAC
TAAACANGTATTTTTGTACTAAACAGGGGGTATTGGGGTatatttgggag
tttgctgCTTGGTATTTTTGTACTATACAGGGGGTATTGGGGTatatttg
ggagtttgctgCATAGTATTTTGTACTAAACAGGGGGTATTGGGGTatat
ttgggagtttgctggatagtatttTGTACTAAACAGGGGGCATTGGGGTA
TATTTGGGGTATTGGGGTatatttgggagtttgctggatagtgTATTGCA
GTTTTTGTACTATATGGGTGGGGTGGTGTCTAAAATCGAAATTCGCNGGG
GTATTGGGGTatatttgggagtttgctggatagtgTATTGCAGTTTTTGT
ACTATATGGGTGGGGTGGTGTCTAAAATCGAAATTCGCTACAAAGTACTG
ATACATGCCGTTGTTTAGTTTCAGCTCATCATGGAAAAAAGAagatatta
ataaaataaataaatatcgcATTTAGCTAGGTAACAACTTTAATAGTCCT
AAAATTGCAACTATAATGGTTgtaacaaaaaatattcaacaaataTACAA
CATTCAAGAACCATCAAATTCAGACATATGTAAATGATTGGCCAGGTTTT
TAGCATTGAAATAAGTAGTATCATAATTATCATCTGGCTGTGGTACAAAA
GGAGCTTGTTGGTTATGAATATCATTCCAATCAATCGATCCAAAACAGTC
CATTGTCTTCACTTCGTCTGCTTTAGGACGTTTATCTGGGTCTACAGTCA
AGAAACGTTCAATAGCAACAACAGTAGGTTCTGAAAGAGCTTCTTCTCCC
TCGGGCCATAATAAATCACGATCAAGGATATGTTCAAAAACGAGTTCAGG
TGTATCATCATTAAACGGCGGAATGCCAGTCATAAACTCATAAAAACAAA
CACCAACAGCCCACCAGTCAACTGATTCATTGTAATCTCGACCCAGTAAA
ATTTCCGGTGATAGATAGTCAGGCGTTCCAAGAATCTTTCGTTTCTGTGC
AGGTGTTGCTTTACCACGTATGCATGTTTTCGGTGTTCGAAATGGTGTTT
GACTTGGTGTTTTCATGGATAATGGAGATGCACCAGGGATGAATGGTTCC
CCATCAGGAGTTTTAAAAGGAGCTCCGTCTGGTGTTTTTTGTAAGGACGT
GGATACATTTATTGACGTATCTGATACTGATAGGAGACGTTTGGTCGGAT
GGGGATCAATCAGATTGGCTGACGTGTCACTATCGTCAACAAATAAAACT
TGCATTGGAGTAGTTTTAATGTTTGTTCGGTATTTACTTTGACTTGCGTT
TTTAGGTGTCAATGAGGGTGACACATCTTTGGCGCATAGAGATTTGGGTT
GAGGCGATGGGGTGAATTTAGTTAAGGACGAATCAAAATCTTTGTTGATA
CTTATGCTCATGTGACTGGTATCAGTTAGTGCTGTTACACCACTGATGTT
GTTTTCTTGGTTTGAAGCACCTGAGGTATCGTTCAAGTTATCAGTAGAAA
GATCAATAGACGGGTTATCAAGACTAAATTCATTACCATGGTGACTAAAA
TGCTGAACCTCATCATGAAATTGTACAAAATTCTTTTTCACTGCTTGTTG
CTGTGGTTGCTTTTCTGTTGTTGAAAAACTAGTACTCATGTCCACAACTG
AGAGGTTAATTTCCGATGGCAAACTACTGTGTGAGGAAGGGAATACGCGC
AATCGCTTGGATTTGGAATCATCGAAGTTCTCCTTCTCAGTATCATCTTC
AAGGGTGCTTTCGTCTCTCATATCATGAAAACTTCTTTTTCTCATTCGTG
ATTGTATGGTTAAGATTTCAATGTCTTCAGTTAAGTTGGATTTAGCGGTG
CCAGCCAGTTTACTCGATACTTCTCCGATATTTGGAGTGGAAGCTATTGT
TTTTGCAGCTAAGGGTGTTGATAAAATCGGATTAAAAATACTTTTACTTC
GAGATATTGTACAATCTTGTGGTGAACTAAACATAAAGTCACTTTCATTT
AATTGAGATAAAGAGGTTATTGAGTCCCTTCTTGATTTTGTCATAACACT
ATGTGCTCTTGCTTCAGTCTTTGGGCGTGGTGCTGAAAATGTAAACTTGC
TTGTCAATGATTGCAACTGTCCTGGTGTTCGCCAGAAAATTTTACCTTTC
AAACTGATATTACCTGGCGTGTTCaataaatcatgaaaattaGGTTTACG
CAATTCTGTGAAATAAGACAGTCCAAAATCTGTTAGTTTAATATGACCAG
TGCTTGATAATAACAAATTATCTGGTTTGATATCTCGATGTATAATTGAA
TGCTTATGGAGATATTCAAGAGCTAATGTCATCTCAGCCACGTAAAACAA
AGCCATCTCTTCTTGGAAATAACCCAAATTATGTAAAAGTGATTTGACGT
CTCCACCGATCATATACTCCATCACTAAGAAGATTTTCTCGTTAGATTGA
AAGGAATAAAAGAGCTGCACCACAAAAGGGCTCTTGGATGAGATTGCCAA
AGCGTCACGTTCAGCTACCACTTGATCCATCATATTCTTATTCAAAACGT
CTTTCTTTTTCATTGCTTTCAAAGCAAACAATCGAGATGAAATCTTCTTT
TTGGCCAAATAAACTTGACCAAAAGCCCCTCGACTTATGGGCTTGATAAT
ATCAAAATCTTTGATGCACGGTGCTTGATGTGTCTTGGATACTGATAGAT
GTTTTGAATCAAATATGGCGCGActcttctttatttctaaagaatgcgcc
attttctttttttaacctgaaaaatatgaagaaagctattttttatgttc
aaat Coding sequence (CDS) from alignment at sc0001488:21998..26501 >TCONS_00036641 ID=TCONS_00036641|Name=TCONS_00036641|organism=Clytia hemisphaerica|type=CDS|length=2199bp|location=Sequence derived from alignment at sc0001488:21998..26501 (Clytia hemisphaerica)
TCAAGAACCATCAAATTCAGACATATGTAAATGATTGGCCAGGTTTTTAG
CATTGAAATAAGTAGTATCATAATTATCATCTGGCTGTGGTACAAAAGGA
GCTTGTTGGTTATGAATATCATTCCAATCAATCGATCCAAAACAGTCCAT
TGTCTTCACTTCGTCTGCTTTAGGACGTTTATCTGGGTCTACAGTCAAGA
AACGTTCAATAGCAACAACAGTAGGTTCTGAAAGAGCTTCTTCTCCCTCG
GGCCATAATAAATCACGATCAAGGATATGTTCAAAAACGAGTTCAGGTGT
ATCATCATTAAACGGCGGAATGCCAGTCATAAACTCATAAAAACAAACAC
CAACAGCCCACCAGTCAACTGATTCATTGTAATCTCGACCCAGTAAAATT
TCCGGTGATAGATAGTCAGGCGTTCCAAGAATCTTTCGTTTCTGTGCAGG
TGTTGCTTTACCACGTATGCATGTTTTCGGTGTTCGAAATGGTGTTTGAC
TTGGTGTTTTCATGGATAATGGAGATGCACCAGGGATGAATGGTTCCCCA
TCAGGAGTTTTAAAAGGAGCTCCGTCTGGTGTTTTTTGTAAGGACGTGGA
TACATTTATTGACGTATCTGATACTGATAGGAGACGTTTGGTCGGATGGG
GATCAATCAGATTGGCTGACGTGTCACTATCGTCAACAAATAAAACTTGC
ATTGGAGTAGTTTTAATGTTTGTTCGGTATTTACTTTGACTTGCGTTTTT
AGGTGTCAATGAGGGTGACACATCTTTGGCGCATAGAGATTTGGGTTGAG
GCGATGGGGTGAATTTAGTTAAGGACGAATCAAAATCTTTGTTGATACTT
ATGCTCATGTGACTGGTATCAGTTAGTGCTGTTACACCACTGATGTTGTT
TTCTTGGTTTGAAGCACCTGAGGTATCGTTCAAGTTATCAGTAGAAAGAT
CAATAGACGGGTTATCAAGACTAAATTCATTACCATGGTGACTAAAATGC
TGAACCTCATCATGAAATTGTACAAAATTCTTTTTCACTGCTTGTTGCTG
TGGTTGCTTTTCTGTTGTTGAAAAACTAGTACTCATGTCCACAACTGAGA
GGTTAATTTCCGATGGCAAACTACTGTGTGAGGAAGGGAATACGCGCAAT
CGCTTGGATTTGGAATCATCGAAGTTCTCCTTCTCAGTATCATCTTCAAG
GGTGCTTTCGTCTCTCATATCATGAAAACTTCTTTTTCTCATTCGTGATT
GTATGGTTAAGATTTCAATGTCTTCAGTTAAGTTGGATTTAGCGGTGCCA
GCCAGTTTACTCGATACTTCTCCGATATTTGGAGTGGAAGCTATTGTTTT
TGCAGCTAAGGGTGTTGATAAAATCGGATTAAAAATACTTTTACTTCGAG
ATATTGTACAATCTTGTGGTGAACTAAACATAAAGTCACTTTCATTTAAT
TGAGATAAAGAGGTTATTGAGTCCCTTCTTGATTTTGTCATAACACTATG
TGCTCTTGCTTCAGTCTTTGGGCGTGGTGCTGAAAATGTAAACTTGCTTG
TCAATGATTGCAACTGTCCTGGTGTTCGCCAGAAAATTTTACCTTTCAAA
CTGATATTACCTGGCGTGTTCaataaatcatgaaaattaGGTTTACGCAA
TTCTGTGAAATAAGACAGTCCAAAATCTGTTAGTTTAATATGACCAGTGC
TTGATAATAACAAATTATCTGGTTTGATATCTCGATGTATAATTGAATGC
TTATGGAGATATTCAAGAGCTAATGTCATCTCAGCCACGTAAAACAAAGC
CATCTCTTCTTGGAAATAACCCAAATTATGTAAAAGTGATTTGACGTCTC
CACCGATCATATACTCCATCACTAAGAAGATTTTCTCGTTAGATTGAAAG
GAATAAAAGAGCTGCACCACAAAAGGGCTCTTGGATGAGATTGCCAAAGC
GTCACGTTCAGCTACCACTTGATCCATCATATTCTTATTCAAAACGTCTT
TCTTTTTCATTGCTTTCAAAGCAAACAATCGAGATGAAATCTTCTTTTTG
GCCAAATAAACTTGACCAAAAGCCCCTCGACTTATGGGCTTGATAATATC
AAAATCTTTGATGCACGGTGCTTGATGTGTCTTGGATACTGATAGATGTT
TTGAATCAAATATGGCGCGActcttctttatttctaaagaatgcgccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036641-exon-sc0001488-1491911889:21998..26501 | TCONS_00036641-exon-sc0001488-1491911889:21998..26501 | Clytia hemisphaerica | exon |
| TCONS_00036641-exon-sc0001488-1510915933:21998..26501 | TCONS_00036641-exon-sc0001488-1510915933:21998..26501 | Clytia hemisphaerica | exon |
| TCONS_00036641-exon-sc0001488-1575043694:21998..26501 | TCONS_00036641-exon-sc0001488-1575043694:21998..26501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001488 | supercontig | sc0001488:21998..26501 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0004674 | protein serine/threonine kinase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
BLAST of TCONS_00036641 vs. Swiss-Prot (Human)
Match: GWL (Serine/threonine-protein kinase greatwall OS=Homo sapiens GN=MASTL PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 2.761e-66 Identity = 117/198 (59.09%), Postives = 152/198 (76.77%), Query Frame = 2
Query: 134 PCIKDFDIIKPISRGAFGQVYLAKKKISSRLFALKAMKKKDVLNKNMMDQVVAERDALAISSKSPFVVQLFYSFQSNEKIFLVMEYMIGGDVKSLLHNLGYFQEEMALFYVAEMTLALEYLHKHSIIHRDIKPDNLLLSSTGHIKLTDFGLSYFTELRKPNFHDLLNTPGNISLKGKIFWRTPGQLQSLTSKFTFSAP 727
P I++F I+KPISRGAFG+VYL +K +L+A+K +KK D++NKNM QV AERDALA+S KSPF+V L+YS QS ++LVMEY+IGGDVKSLLH GYF EEMA+ Y++E+ LAL+YLH+H IIHRD+KPDN+L+S+ GHIKLTDFGLS T R N D+L TP +++ + + RTPGQ+ SL S F+ P
Sbjct: 30 PSIEEFSIVKPISRGAFGKVYLGQK--GGKLYAVKVVKKADMINKNMTHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRDINMMDILTTP-SMAKPRQDYSRTPGQVLSLISSLGFNTP 223 HSP 2 Score: 205.297 bits (521), Expect = 5.308e-54 Identity = 92/170 (54.12%), Postives = 121/170 (71.18%), Query Frame = 2
Query: 1742 KTPSQ----TPFRTPKTCIRGKATPAQKRKILGTPDYLSPEILLGRDYNESVDWWAVGVCFYEFMTGIPPFNDDTPELVFEHILDRDLLWPEGEEALSEPTVVAIERFLTVDPDKRPKADEVKTMDCFGSIDWNDIHNQQAPFVPQPDDNYDTTYFNAKNLANHLHMSEF 2239
+TP+Q TP+RTPK+ RG A P +ILGTPDYL+PE+LLGR + +VDWWA+GVC +EF+TGIPPFND+TP+ VF++IL RD+ WPEGEE LS+ A+E LT+D KR E+K F +DW ++ +Q PF+PQPDD DT+YF A+N A HL +S F
Sbjct: 709 QTPNQIKSGTPYRTPKSVRRGVA-PVDDGRILGTPDYLAPELLLGRAHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILKRDIPWPEGEEKLSDNAQSAVEILLTIDDTKRAGMKELKRHPLFSDVDWENLQHQTMPFIPQPDDETDTSYFEARNTAQHLTVSGF 877
The following BLAST results are available for this feature:
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