TCONS_00036625 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036625
Unique NameTCONS_00036625
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2890

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036625 ID=TCONS_00036625|Name=TCONS_00036625|organism=Clytia hemisphaerica|type=transcript|length=2890bp
GTAACCTCGTAACATGTAGGTCAGTTGTCTTACACATCAAATTGGAATCT
ATTTAATATGTCTGGACCTTCAATACCATCCTATTTATTCTGTTGATGGT
AGCATACTGACCAACTTGTTTGAGTATGTCAAGTACATAAGTGGGCAGCT
TGTCACGCCAACATTGGGCCATAATGTGACTTACGATAGCACAACAGTGC
TATCAATCTGTCGTCAGGGAGATATCTATCTTCGAGCAACCCATGATCTT
AAAAACATTGAAGTAGATGGTGCTAGTCCCGACAATAGTTTGGAAAATGC
CTTGCTGCAGCACCGAGGAACATCCTCAACACCATCAACAATGTCATTGC
ATGGTTCGACCACAACACCACAATTAGACCAACCACTATCTCAACGGCCA
GGTGGCTCAAGATCAGCAATTTCATTGTGGGGTTCAACCACCACACCGCT
ATCAGACCAACCATCATCTCAACGCCCAGGTTGCTCAAGATCAACAGTGT
CATTGCAGGGTTCAACCACAACACCACTATCAGACCAACGCCCAGGTTGC
TCAAGATCAACAGTGTCATTGCAGGGTTCAACCACAACACCACTATCAGA
CCAACAACCATCTCAACAGCCTGGTTGCTCAAGATCTCAGTCACAGTTAA
GGGAGTTATTCCCAAATCTAACAGACTGGCAAGTGTCCGAAATATCTTCA
TCATATCCGGATTTGCAAGAGGCAGCAAGCTTTGCTGCTGAGATCAGTGA
GAAAAATGAGAGTAAAGCTGATAAAACATTGGAAACGCTAGAAGATGTCT
TCATATACTTTGAGAACAAATTTGATTCAGCAACTCAAATTCTTAGAGTT
CATGACAAGGATATATATTCAGGGGTCCTGTCACTTTACAAGGACAAAAG
TTTTGACCCACTGAAGAAACTTCGGGTTATCATTGAAAATGGGCCTGGCA
TAGACGCTGGTGGTCTTACTAGACACGCCTTTGACACAGTCTTTCTTACT
CTCCGCAAATCAGGACACAGCCGTTTATTTGAGGGCAATAGGTATTCCCT
TCTGCCCATTTGTACCACATCAACTGCACTGTCAcagatttttgttttca
ttgggAAAATCATAGGGCATGCTTTGTTGCATGGCATCCGAGTGATTCAA
ATTCCTACAGTAGCCTACTATTACATTATTACACAAGACATCACACATTG
TTTGCAGTATTTAGATGCGGATGATGTTTCATGTGAAGCAATCAAATATT
ACGTTGATGAGATATCCGATGCAGATGAAAGAAAACTGAAAGAGCTGGCA
GAAAACGCAGAACTACTTCAATATATTGAAGAATCAGGAGAAAGATGCAC
TCTGACTGTAATGCTATTTTTGCTTGAATCATTTTTTTGACAATCAGCAT
AGAGCAACACTGGCATTATTCAGACCAGAGTTAAAAGGGGCATAATAAAA
TTACTAACAACTTTGCAAACAAACTGTCTGAAGCTGGGTACAAAATCAGG
GTTCCCAACGGTCAGGGAAATACTTGAAAACCTGGAAAGTAGATTTTTCA
ATATCTTTCTTTGATCAGAAGCTACAGCCCATATAAGTGGATCCACTTTT
ACCCTTTTTGACagtttttgcttgtttttgctcacttcaaagggctgtaa
cttttgatccgAGAAAGAAATCTGAGCACAGATTTGGAATCAACTTTTAt
cttaaattttcaataaaaaacttgaccaattaaaatattcaaaaaatggg
aATCTCTCTGTAAAACATTCATTCGTTTGTGCTATTTTTGCCGTGACAGC
TTGATGTGTTGTGAGTATGTTTAAAGTGATTGCTCTCACATTTCCTTTCT
ACATTTATAAAGAAGCACACTTTTTCACTTGTGAATTCTGATCTCGTTTC
TTCAGTAAACTGtgacaaaattttaaagttttttttgaccAGATAGTTAT
TCTTTTTTAAGTCAGCAATTCATATCCTAGATTGAGACAATATCTAGGGC
GTTTCAAAGCTactcttaatttttttaaagtaatgATCGATTTTTCTTTT
AGAAAGAAACAAAGCAACTCGTGCTTCAGTCATTGATAGTATATGATGTA
TTAATCAAAAGACGTACCTCTTATGAGCATATTAGAAAAGGTCTGGAAAT
TGTTGGAGTTTTAAAAACTCTACAACTCTACAAAGACTTATGTAAACCCC
TTCTAACATATGATGCCCGCTATGATGATGTAAATCCTGAGAGCATGCTG
AGAAACATAACATGTAGCAGTCAAAATTTGTCACACGGGCCTTTGCTGTC
AAAAGTGATCCGTAGAATGAGCAACAAAGAACTGAAGCAGTTGCTCAAAT
ACGCAACTGCTTCAGATAATTTGAACGTATTAAAAGATCAAAACCTTTAC
GTCAGAGTTGTGCCAGACGCGGCTGGATTTTTTTCGTCAACATGTTCAAT
GGAATTGACGGTTCCTGaagcactttttgaaaatgaggaAATGCTTTTAA
ATGCCTTCAAATCAGTCATTATACCTGGAGAACAAAGTTTCAATGCGTCT
TGATTCATGGTTATTAccattgactttttttttactttcgtttGTATTAC
TGATTTAGAAATTAATTTGTGTataattataggggaattaacATTTTAAA
TCCGTCAAGAAAAGAACGACAGTTTCAAATATACTGCAACTTTTAACACT
GACATGAATTGGTGTCAATCTGAATTCCATTTTTAATAGAAAAAGTTTGA
CTGGACCAAAAGTTAGggattttaaaataatttaagtTGTTCATTCTGTC
CAGAAATCTATAAAACTCTGATTGATGTCAATTCCCACATGCGTCAAAAG
TCGCAgtattttaggcttaaaattgaTGTTAAACGGCAGT
Run BLAST on NCBI

transcript from alignment at sc0001487:27339..41418+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036625 ID=TCONS_00036625|Name=TCONS_00036625|organism=Clytia hemisphaerica|type=transcript|length=14080bp|location=Sequence derived from alignment at sc0001487:27339..41418+ (Clytia hemisphaerica)
GTAACCTCGTAACATGTAGGTCAGTTGTCTTACACATCAAATTGGAATCT
NAACATATCGTCAACGAAAGCAGATAATTCTTCACGTGTAACGTAACCTC
GTAACATGTAGGTCAGTTGTCTTACACATCAAATTGGAATCTATTTAATA
TGTCTGGACCTTCAATACCATCCTATTTATTCTGTTGATGGTAGCATACT
GACCAACTTGTAAGTTATAATTTGTATCTATAGTATAAAGGCTGTATCTA
CAGTAGTAACTCCACATGCAGCAGACCAGGGATTTAGTCAAAAGGAGGCA
GACTtgctcattttcaaaaattttgctgctCAATATCTTGCCCATATCTT
GAAATAACTTTCAAAGGATCCTTACTGAAGATATGGAGATAGAACCATTG
AAATACAGCCGAGTGTGGTGTGGGTAGCTAATGGGCTAGACATCAATTGT
CATACGTCATCGAATTTAATCGAAGCTAATCGAAGCAATTAGTTTTCAAT
TAATCGAACTAATCTAATACtgtcaacggctctaacttgggacgagtggt
cATAATATGGGATGGTTgatttctggtctgtattttcacttactgttaat
ctcccttgacaacaagtttgttttctatgaGATTTGCGACTATTATGTTA
ATTAAAATGACTTCGGAGGTTCGGTAAATTATGCctgaattgctgtccca
tgtttcgtcagactgtcccaagttagagccgttgacggtaCTAATCGAAG
ACTAATCGAACAAATTGAgattaaaaaaagattggaaaatTTGATTAGTT
CTATTAGATTCGATTTAAGCTTCGATTACCTTCAATCGAAACTAATCAAA
GCTAATCGAAGATTAATTGAATTCATTgaaactaatcgaactaattaaga
aaaaaattgattgcaAAATTCATTTACTTCGATAAGTCTTCAATTAATTT
TGATAATCGAAGACTAATCGAAGACTAATCGAAGTGATTATTTTCGATGA
ATTCGATTAAAAATACGTCGTACCTACGTCTGGAATCAATAAAATCGATT
ACCGATTAAGATTGATAGATAATCGATATTAATCGATGGATTATAAATAT
CTATTAAAATCGTTAAACGGTAAAAAATCGATATTCATAATTATAATCAA
TATTAATCGATGACGAAAAGCAATCGATACTAAACGATATTTACAATTTT
TTCGACCTCGATTAGCTATCGATTATCGATTTTAATCGGTATTTAATCCA
TCGATTAATATGGATTATCTATCGATTTTAACGACCGTCTGGTTTAACCC
GTTTTACCATAGTGGGGGGGTTGACTTTTGGGTCAAATTTTTTGATTGAA
AGAGGAGGGTTGAGGCTATTTTAGTATAAAAAGTGCTTAAACAGTCATAA
AGTTCCAAAAAAAATCCCCCTACTACATTTGGTTCCCTTTTTGTTTATCC
TTCCCCTTACATTATTCTTATCTTTATAGTAATTGCTACTTACTGATTTT
TTAGCCAAGACAATGAATAGTAGTAGGATTGTAGCAAGGATTCTAGGTTC
AGACAACAGTGTATTATCTGAAAGGAATAGACTTTTTCGGAGAAACAACC
GTGATAATGGTACTCCCAAAGCTAAAAAAGTCAAGATTGTGTCAAAAGAT
GTTTACCTTCTTGACAAAGAGACAACCACAATGCCTCGTGGGGCAGATAA
ATGCAGCTTGCATCAGAGGAAACAAGTTATAACAGCGTTTCAGTTAGAAG
GGTATCTCACAGAGGAGGAGCTGTATGATAGACTTGAGCAATGCTTTTCA
GAAGTGTTAGACTTTTCAAGTCCTGTTCCCAGGTATCTATATATACATCA
CTTTTTGTTACAGACTCATGTcatcaaactttcatttttactttgTATTC
CAAGAACTGTATCAGAGGAACTCTCTTGCAAGAATTTAACCTTGCAAGAA
ATTGACTTCTCCAATTAGCAAACCTTTTATTTTATTGTGATTTAAAGAAA
TACTGCAGATATAAATAGGGCTAGGGGACCCCTGGTTTTGATGGACTTTC
ATGGTATACGCCACTGAAATCTAGGCTGAAATCAGTGGTTGACAGATTGG
CATTCTTTGAATTCAATTTGAATATCCAAAGTGATAATCACTTGTGTCAA
TTAATGAAGAAGATttgaaagaagattttttttcaacaaatttcatgAAA
GTGGAAACCCCAAAAAAGCAAGACTCACAATATCTAATCTTTTCCAATTC
TTTTCGTTGCAAATCACCCTGCACTTTTTTTATTgctgttcgttcgtctg
ttaccagcttttctcggggattggctcattagtttttgctgatttttggc
acaaagatgcaaaacaGTATTCCCCTAAATGTGACGGAGCACGATTTccg
gaaagaatttttttcggccgaaaataccAGAATTATGCCGGAAAACTGGT
TCTttagcattttctcgagatttagGCATAATTCGCcaagatttttaaga
tttttctacTCAATAAATTAGTTCTCGTCAAAATAAGGCTTTTCTAAGAT
AATATTTTTGCAAATTGCTGTAAAAATAAGATGATTTAAAGGCAACTAGA
GTGGGcgaattttccaaattttctgcCCCTCAGGGCGAACAATGGTCGCG
CTTCGGTGACACTTCCACGCAAATGATTCACAAAAATAACCGACCAGAAG
AAAAAAGCTTATTTCGACCACTGCCGTTTTCGGATATAttgaactttcga
atttttcaactcaaagGAAATTTCTAACGTCAAAACCAAGATATCCTTTT
TCGCATATCGGACAGACTGCCATGGTGGCCACACTCCTGGAAATTCCTGG
AATACCCTGGGATTAATGTTTTCTCCTGAAAAGTCCTTGAAACTCCTGGG
ATTTCTGGATATTCAAAATCCCTGGATAATCTTTTTTCCAGAAGGTTTTG
ATCCCTCTTAAAAAATTTTTTTTTGCCTGCGGCGCAATACATTTATTGCC
AATTCTTTACAAGCAAAATTTCTTTGATATTTTGCTCTGTGAAGGTGGGG
CTACGTTTTTAAAATTCAGCAAGGGCTATTTTTCTTAGCCTCCCCCCTGA
AAAATGCTGGGGGCTGGACCCCTCTGCATACTAGATATGTTTAAATATTA
ATTTTTCTTGTTGAGATTTGACACCTTTTTATCCTGGAAAATCCTTGATT
TTTTCTGTTTTATGCTATTTTGTCCTGAAATATCCTGGAATTTTATGACC
TAAAGTCCTGGAAAAAGTCAAAATTGTCCTTGAAAGTCCTTGAATTTGCA
AAAAATAATTGTGTGGCCACCATGGACTGCTAGATATGAAATTATTTTTA
ATATCATCCCTCCAAAAATTTGTTATAAAACTTTTTCATATTCTTATAAT
TACATAAACAGGGGGGTCAGTACTAAAATGTAAGACATACATGAGTACTA
AAAGGAATTTTGCTAAATTTTGACACCCCACCTATTGTTCGAAAGTGTTA
TTTTAGTACACAAGCACTAAAATTATTTTGCCCTTTTACGGCTTTTGATT
TACCAAAACATGGCATAGTGCGGAAGGGGGTCTGGCTTTGGCATCCCCCC
CCCACCTTGAAAAATGCCTATCCCCCAAGGTTTTTGGGCTTTTCGAGTTT
GGAAATTAATGCATGGTTTTGACTGCGTAACACTCAAATACCACACTAAA
ATTGCCTTATAAATAGGAAATGCATTGTAAATTGGGCAAATTTCCCTATT
GGAAGTACAAAAGTACAGAAAAATGCACAATCCTGACCAGAAAAAGAAGA
TTTCATGTCAGTCCCCCCTTCTTGCTATCCCCCCCCCCTTTTTGAGGAAA
ATTTCCAATCCCAATTAAATTGTCCTAATTTTTATAACAGAAGATGTCTA
ATTCAGATTACTGGGGAAGCCAAAAAGAATTTTTATTTTCATTACTTCAT
TGTTTTTGAAAAGTTATTTTTTTATCTGGTATAAATTTATATCATGTTTC
TCTCTCGCAATTTAGGTTTGAGTATGTCAAGTACATAAGTGGGCAGCTTG
TCACGCCAACATTGGGCCATAATGTGACTTACGATAGCACAACAGTGCTA
TCAATCTGTCGTCAGGGAGATATCTATCTTCGAGCAACCCATGATCTTGT
AAGTTTTTTGTATTATAGTTAGCAACATTGATTATAAACCCATACACCCT
TAAAGGCTATGTATGCATCTTCACTTCAAACACTTCAGTTTAGATTTTCA
TGGATGCAGCCAACAGGTTTTGTATTTTGATGCACCTACAACTGAGTTCC
TAAAGGCTAAGGCCTCAAAATTGCCTAAATAAGCAAGTTGCTTAGCAACC
CTGCAGCCTCAAATccaaattagaaatttctttcttcacaaataaaaaat
aactttaataCAATGCTAAAAGTAATGCAAATCTCGGAAAAATGGGTTGT
TGTAAAAGGTAGTATAGTCCCATGGGCTACCCCAATGGGGTACCTTTTGG
GATACCCAATTATTCCCAATCAGAGCAATGATCAACACAAATTTGTCGAC
CACATTGTTCCTCTATCTGTAAACTGCTAACTTATGACATAAAAGTATCT
CTGAAGTATGTTCTGATGAAAAATAGAATTCTTTATTTCTAGGTTTGTTG
GCGgtaaaagtttattttataGCGCATGCACTGCATAAGAATCTTTGCTG
TTTTCGTAATTCAGCAGATCAGATTTTGTTTGCAGAATAACTTTGGTATT
CAAAATGCTTACTTACTCAATAGGGGCTAATGGAGATTACTGAAGTGATT
GtccttttgtcttttttcaacaaattgaggttttgtttaaaaaatatcgT
GACAATCATAACATttccaaaaggaatttttatcatACTCAATATGATGC
AAGTAGTATGAAAGGATAAGAATCGGCAGCTGGGAACAACTTGTGAGAGC
TGAGGTGTGCGTTTTAGAGGAACACAAAATCTCATTAATTATTCATTGGA
ATTTTACTCACAAATTaacttttgtttacaaaaatattaatgTAACAATA
ATATTTGGAGTCTATCATATCAATTGATCGAAAAAATAATCTCATACTCA
ATGTGACGCACATgctataaaagaataaaagaagaGGTCAGTCACAAGCC
ACTTGTCCTGCTAGAAAGCACAAGAGCAGTCTTAGAGCAAATCAACATTT
CAATGAGAGACTCCTGTCTCAATGAGGAGTAATGTAAGTAGGTCCTTACT
TTTCCTTCCAGAGCAATTTCTAATCTGGTCTGTAATATTTTTTAGGTATC
CCAGACAGTACCCCATTGGGGTAGTCCATGGGACCATACTACCTTTTACA
ACAACCGCTGAAAATGCCTCTATTGTCCATTTACAAATGAAGAATAGTTT
CTACCCCCTAGACTTAGGGAGGGTCTTgggatttggaaaattcttTTAAG
GGGGATCTTTCTTCTGCTGATTTTTTAGGTGGCGTCAGCCTTTAGGGGGG
ATCTTCCTATTTAAGGGGGGtttcaagtttttgtaaaagttttgcCTCGG
TGCTAATTTTCTACCACAATTCCATCTAAAGTTAATAAATTTGTGCCTGC
GGCGCAGTTAATGTTACAGTTTATGTGTCCAAATGACAATGGCTGCAAAA
AACAACATAATGACATCGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcatca
acccaaatttttttctatgaactccttttatggtagagaacatttatgcc
aaatttcaagtccatatcttttatagatcaaaagttatgcaaggctggta
gaaaacacccccccttgagaatacaaaatccgaaaaagcctgataataat
agggttaagttACTGTTTATTATTTCCTAATGCTTTGGTATTATTTAAGC
AAATAGCAATTAATAATTGCACCTAAATGAAAAATGTTTGATTCATTATC
AGGTAGGTCCATATAAGTATAGCTTGTTAAGGGGGGTCTTAACCTCACTA
GAAACTATTTGTTGAAAAATGCAACAGTGTGATGTCCTTCACCCAATGAA
ATCTTGAAAATTTTTAAGCAACCTTGCAAGCAACTTTGGACCTGGGTTTT
GAAAAATGCTTAGCAACTCAGTTATTAAAAATAAATGTGTATGGAGTTGC
TTTATGTGTATCTGAATTTACGCTTTTTGGACCTACCTTGGAGGTCCTAT
AAATCAACCGTTGTCCTGCCATTCGTTTGTTACCAGCTTTTCTTGAGATT
GGCTCATTGGTTTTTTTCTGATTTTTGGCACAAAGATGCAAAATGGCAAT
TCACAAAATGTGATGGAGCCCGATTTCCGAAAAAAAATCATTTTCGGCCA
AAAATGCCGGATGCTGGAAAAACCAGTTTTTTGCCATTTTCTTGAGATTT
CATCATTTGTTTTTCCTGATTTTTTGCACAGAGATCCGTATTAGGAATGC
TCAAAATATAACCCAGTCCGATTTTTGAGGAATTATTTCTTTGTTTTTAA
TCACATAAATAATTGTTGAAAGCAATTTCTGATATTTTCTAAAAATTGCC
GGAACAGCTGGTTGCCGTGCTGGAAAAAACAGGTTTTCTTTATTTTCTCG
AGTTGTACTCAATTCGTTCATGAATTTTTGCTTACGTTCGTTCGTTTTTT
AGGATCTTTTCCATTAATGTCTATAATTGCTCTCATTTGTTTAACTTTCA
TTATCAGGTAGGTCCAATTAGCATTCAGCTTGTTTATCTGAAAATTTCTG
TTGTCCACCCCCCTCAGCTACCAAATTGCTTGAAATTGATGAATATATAG
GACAGGACCTTCACTGATATTTTCATTTATTTTTTTAGAAAAACATTGAA
GTAGATGGTGCTAGTCCCGACAATAGTTTGGAAGTAATTTCTTGCATTAT
TTACAGTTTCCTTTTTTATTTGTCATTTTTCTCTCTGAGTAATTCTTAAT
AAAAGGCCAGAAAAGGCATCTTTTTTGAGTGTACTACGAAGCTTCAATGT
TTCAATAAAAAATATTTTAAGATAAAAAATTTTTGTATGGAAATCCATCA
GTGCCATTTAGATTCTCCTTTAATTTTTTAACGACCAAACTAAAAAAAAG
ACTATGGAACTAAAGAATTGACAGCATAACTTAAAAATGGTTGTTTCATT
TCGTTGTTgaaaaaatcgacaaaaatgatgaaaaattatttcaaaatggc
ggcacTGATGGTTGCAAAATGGATTTTGATTCTGGTGGATTTTGATAGTG
TCTgctgattttcattggattttttcattaaatttttgtcctttttcaca
caaaaacactATGGTTAACAATGCCCATGATaaagcatgattcaattatc
aattaaactgatttttgctaGAAAAGCGGTTTTTCTTTCTCGAGCTGCAT
TTGACAAATTCTTCGTTAAATTTCGCACCACATCGCAGCACATTGGTGCA
AAAtaacaatgcctaaaatgtgacagcccatttttcaaaaaacatttttt
cctggCAGAAAATGCTGAGAAAAagctggaaaatttttttttattccttt
tttttttaatggcaGAATGCCTTGCTGCAGCACCGAGGAACATCCTCAAC
ACCATCAACAATGTCATTGCATGGTTCGACCACAACACCACAATTAGACC
AACCACTATCTCAACGGCCAGGTGGCTCAAGATCAGCAATTTCATTGTGG
GGTTCAACCACCACACCGCTATCAGACCAACCATCATCTCAACGCCCAGG
TTGCTCAAGATCAACAGTGTCATTGCAGGGTTCAACCACAACACCACTAT
CAGACCAACGCCCAGGTTGCTCAAGATCAACAGTGTCATTGCAGGGTTCA
ACCACAACACCACTATCAGACCAACAACCATCTCAACAGCCTGGTTGCTC
AAGATCTCAGTCACAGTTAAGGGAGTTATTCCCAAATCTAACAGACTGGC
AAGTGTCCGAAATATCTTCATCATATCCGGATTTGCAAGAGGCAGCAAGC
TTTGCTGCTGAGATCAGTGAGAAAAATGAGAGTAAAGCTGATAAAACATT
GGAAACGCTAGAAGATGTCTTCATATACTTTGAGAACAAATTTGATTCAG
CAACTCAAATTCTTAGAGTTCATGACAAGGATATATATTCAGGGGTCCTG
TCACTTTACAAGGACAAAAGTTTTGACCCACTGAAGAAACTTCGGGTTAT
CATTGAAAATGGGCCTGGCATAGACGCTGGTGGTCTTACTAGACACGCCT
TTGACACAGTCTTTCTTACTCTCCGCAAATCAGGACACAGCCGTTTATTT
GAGGGCAATAGGTATTCCCTTCTGCCCATTTGTACCACATCAACTGCACT
GTCAcagatttttgttttcattgggAAAATCATAGGGCATGCTTTGTTGC
ATGGCATCCGAGTGATTCAAATTCCTACAGTAGCCTACTATTACATTATT
ACACAAGACATCACACATTGTTTGCAGTATTTAGATGCGGATGATGTTTC
ATGTGAAGCAATCAAATATTACGTTGATGAGGTAGGTATGAAGCCAGGGT
CAAGCTGTTACTCTAGGGTCGAACTAACTGCTTATTGCCCCCTGTATGAA
GCTCTAAATCTTTGACATACAGAAGTTTTAAGGGTTCTTATCTGTTAGTT
TGTTGCTGTTTTTGATATGCATCAATGTTCAATGTTCGGCCCCATAAGTA
GCATGTTGGAAATCTAAATCTTTACCAAACTTTCCTCGCTAAAAATTAGT
TCGTGCAGAAGAAGAACTTTTcctctaaaaattaaaaaagtttcattGTA
AAAGCCTCAACCTTTTCGAAGATATCGAAGACAATATAAGGTACCAAGAA
AACTAGAGCTTACCCAATTGGTGTGATACCTAAAAATAGCATTAGAAGTC
ATTGTACTGTAAGGAATTCTAACGTTATTTCGAACTGGCGTCAAAATTAA
CTGACGCTGGAAGAAAACTTccgaaaaaaagacaaaattgtgaaaaatga
CAATCCTCTATTTCAACCTTGTATCTTCCAAATATATGGAGAATGTTGAA
TTTTACCACAGATATCGAAAGATGAGGGGTTTGAGCTTCTATACATCTAA
AAATTGACGCATTCTACCTCACTATTGAGTGTGATATTTCTCTTCAAATT
TTATCACGCAAACTGGGTAAGACTACCGCCAGCTGGGTAAATCAAAAATG
ACTTTCAAACTGCTATAATTGAAAAACTAAATCAAACTGATTAAATGAAA
TAAGTGTTTTGTACTCCCTTCCTTAGTGGCTATCTAAATGTGAAAAGAAG
TCCCAGTAAGATATACGGCCGATGTAAATAAACAGGAATCTTTATAAATT
CACGCCAACTGGGTACCACACTCTAGCCATGCAAAAATAAAGTGATAAAA
GTAATTAACAAGTATTTTATATTGACTGAAATTGTAAAAATTAACATTTA
AATTTGATTTCTTTATGATAACTGGATACTGTAGGAAAATATTGACCAGC
CTTGTTACCTTAATTGGATTAATTTTCGCATGGACTAAATTTAGCAAATC
AGCTTTTTTTCACCTAATTTCTTTCACTTTCCTAGGGGTTTTGGCAAAAA
TTTCAATCAAAAAAACTTCGCGTTGACAAAATTTCGTGAAAATGGCCAAA
ATTCGCGAAAATTAATCCACGCCAAAATTAATCCACTTAATAAGGTACAT
CAATATTATCCAATCAGTTTTCTTAAAAATGATTGACAGTTGTATTACAA
GGCTTAAAACAATACAATTTAGTGAGTCAGCTCAGACCCACTGATTGTGT
ATATAGTTGCTAAAGAAGAGCTTAGCACAATACAACTAATTTTATATATT
CTCTATAATGTGTTCCAGCAGTTCGTAACTTAAAAATTTTGTTTTTCCTA
GATATCCGATGCAGATGAAAGAAAACTGAAAGAGCTGGCAGAAAACGCAG
AACTACTTCAATATATTGAAGAATCAGGAGAAAGATGCACTCTGACTGTA
ATGCTATTTTTGCTTGAATCATTTTTTTGACAATCAGCATAGAGCAACAC
TGGCATTATTCAGACCAGAGTTAAAAGGGGCATAATAAAATTACTAACAA
CTTTGCAAACAAACTGTCTGAAGCTGGGTACAAAATCAGGGTTCCCAACG
GTCAGGGAAATACTTGAAAACCTGGAAAGTAGATTTTTCAATATCTTTCT
TTGATCAGAAGCTACAGCCCATATAAGTGGATCCACTTTTACCCTTTTTG
ACagtttttgcttgtttttgctcacttcaaagggctgtaacttttgatcc
gAGAAAGAAATCTGAGCACAGATTTGGAATCAACTTTTAtcttaaatttt
caataaaaaacttgaccaattaaaatattcaaaaaatgggaATCTCTCTG
TAAAACATTCATTCGTTTGTGCTATTTTTGCCGTGACAGCTTGATGTGTT
GTGAGTATGTTTAAAGTGATTGCTCTCACATTTCCTTTCTACATTTATAA
AGAAGCACACTTTTTCACTTGTGAATTCTGATCTCGTTTCTTCAGTAAAC
TGtgacaaaattttaaagttttttttgaccAGATAGTTATTCTTTTTTAA
GTCAGCAATTCATATCCTAGATTGAGACAATATCTAGGGCGTTTCAAAGC
TactcttaatttttttaaagtaatgATCGATTTTTCTTTTAGAAAGAAAC
AAAGCAACTCGTGCTTCAGTCATTGATAGTATATGATGTATTAATCAAAA
GACGTACCTCTTATGAGCATATTAGAAAAGGTCTGGAAATTGTTGGAGTT
TTAAAAACTCTACAACTCTACAAAGACTTATGTAAACCCCTTCTAACATA
TGATGCCCGCTATGATGATGTAAATCCTGAGAGCATGCTGAGAAACATAA
CATGTAGCAGTCAAAATTTGTCACACGGGCCTTTGCTGTCAAAAGTGATC
CGTAGAATGAGCAACAAAGAACTGAAGCAGTTGCTCAAATACGCAACTGC
TTCAGATAATTTGAACGTATTAAAAGATCAAAACCTTTACGTCAGAGTTG
TGCCAGACGCGGCTGGATTTTTTTCGTCAACATGTTCAATGGAATTGACG
GTTCCTGaagcactttttgaaaatgaggaAATGCTTTTAAATGCCTTCAA
ATCAGTCATTATACCTGGAGAACAAAGTTTCAATGCGTCTTGATTCATGG
TTATTAccattgactttttttttactttcgtttGTATTACTGATTTAGAA
ATTAATTTGTGTataattataggggaattaacATTTTAAATCCGTCAAGA
AAAGAACGACAGTTTCAAATATACTGCAACTTTTAACACTGACATGAATT
GGTGTCAATCTGAATTCCATTTTTAATAGAAAAAGTTTGACTGGACCAAA
AGTTAGggattttaaaataatttaagtTGTTCATTCTGTCCAGAAATCTA
TAAAACTCTGATTGATGTCAATTCCCACATGCGTCAAAAGTCGCAgtatt
ttaggcttaaaattgaTGTTAAACGGCAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021622XLOC_021622Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036625-exon-sc0001487-1491911889:27339..27373TCONS_00036625-exon-sc0001487-1491911889:27339..27373Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:27339..27373TCONS_00036625-exon-sc0001487-1510915933:27339..27373Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:27339..27373TCONS_00036625-exon-sc0001487-1575043694:27339..27373Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1491911889:27466..27547TCONS_00036625-exon-sc0001487-1491911889:27466..27547Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:27466..27547TCONS_00036625-exon-sc0001487-1510915933:27466..27547Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:27466..27547TCONS_00036625-exon-sc0001487-1575043694:27466..27547Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1491911889:31354..31486TCONS_00036625-exon-sc0001487-1491911889:31354..31486Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:31354..31486TCONS_00036625-exon-sc0001487-1510915933:31354..31486Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:31354..31486TCONS_00036625-exon-sc0001487-1575043694:31354..31486Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1491911889:36727..36771TCONS_00036625-exon-sc0001487-1491911889:36727..36771Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:36727..36771TCONS_00036625-exon-sc0001487-1510915933:36727..36771Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:36727..36771TCONS_00036625-exon-sc0001487-1575043694:36727..36771Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1491911889:37454..38419TCONS_00036625-exon-sc0001487-1491911889:37454..38419Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:37454..38419TCONS_00036625-exon-sc0001487-1510915933:37454..38419Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:37454..38419TCONS_00036625-exon-sc0001487-1575043694:37454..38419Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1491911889:39790..41418TCONS_00036625-exon-sc0001487-1491911889:39790..41418Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1510915933:39790..41418TCONS_00036625-exon-sc0001487-1510915933:39790..41418Clytia hemisphaericaexon
TCONS_00036625-exon-sc0001487-1575043694:39790..41418TCONS_00036625-exon-sc0001487-1575043694:39790..41418Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001487supercontigsc0001487:27339..41418 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.104137	0.0269056	0.138299	1.59185e-06	1.07376	0.0924113	1.4186	0.556404	0.705351	0.598359	1.05227	0.705233	0.639592	0.440623	0.887892	1.14141	1.05024	1.29572	1.08873	0.759424	1.75052	1.49213	6.86094e-06	0.892368	0	0.0400345	3.41814	1.75021	1.73166	1.30947
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036625 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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