TCONS_00036623 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036623
Unique NameTCONS_00036623
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036623 ID=TCONS_00036623|Name=TCONS_00036623|organism=Clytia hemisphaerica|type=transcript|length=2470bp
gaaatttcgaccgAGCGTGCACGACCGCGCGGCCGATGGGGGAAATAGGG
TAGGGTCTTTTTAACTGGGTCGATCGAACTGCGAATCGAGCCCTCGATTA
CATTGCCGATCCATTCGGATAATTATCGAAACAAATCGAAGTTTAATCAA
ATTGATTTATTCGGGGAATAGGGCTTGGGAACTAAAGCCGCTTTCCCGAG
CACGAGACTAGCTCCTAGTCCTCTTAGCAACAGGAACATATCGTCAACGA
AAGCAGATAATTCTTCACGTGTAACGTAACCTCGTAACATGTAGGTCAGT
TGTCTTACACATCAAATTGGAATCTATTTAATATGTCTGGACCTTCAATA
CCATCCTATTTATTCTGTTGATGGTAGCATACTGACCAACTTGTTTGAGT
ATGTCAAGTACATAAGTGGGCAGCTTGTCACGCCAACATTGGGCCATAAT
GTGACTTACGATAGCACAACAGTGCTATCAATCTGTCGTCAGGGAGATAT
CTATCTTCGAGCAACCCATGATCTTAAAAACATTGAAGTAGATGGTGCTA
GTCCCGACAATAGTTTGGAAAATGCCTTGCTGCAGCACCGAGGAACATCC
TCAACACCATCAACAATGTCATTGCATGGTTCGACCACAACACCACAATT
AGACCAACCACTATCTCAACGGCCAGGTGGCTCAAGATCAGCAATTTCAT
TGTGGGGTTCAACCACCACACCGCTATCAGACCAACCATCATCTCAACGC
CCAGGTTGCTCAAGATCAACAGTGTCATTGCAGGGTTCAACCACAACACC
ACTATCAGACCAACGCCCAGGTTGCTCAAGATCAACAGTGTCATTGCAGG
GTTCAACCACAACACCACTATCAGACCAACAACCATCTCAACAGCCTGGT
TGCTCAAGATCTCAGTCACAGTTAAGGGAGTTATTCCCAAATCTAACAGA
CTGGCAAGTGTCCGAAATATCTTCATCATATCCGGATTTGCAAGAGGCAG
CAAGCTTTGCTGCTGAGATCAGTGAGAAAAATGAGAGTAAAGCTGATAAA
ACATTGGAAACGCTAGAAGATGTCTTCATATACTTTGAGAACAAATTTGA
TTCAGCAACTCAAATTCTTAGAGTTCATGACAAGGATATATATTCAGGGG
TCCTGTCACTTTACAAGGACAAAAGTTTTGACCCACTGAAGAAACTTCGG
GTTATCATTGAAAATGGGCCTGGCATAGACGCTGGTGGTCTTACTAGACA
CGCCTTTGACACAGTCTTTCTTACTCTCCGCAAATCAGGACACAGCCGTT
TATTTGAGGGCAATAGGTATTCCCTTCTGCCCATTTGTACCACATCAACT
GCACTGTCAcagatttttgttttcattgggAAAATCATAGGGCATGCTTT
GTTGCATGGCATCCGAGTGATTCAAATTCCTACAGTAGCCTACTATTACA
TTATTACACAAGACATCACACATTGTTTGCAGTATTTAGATGCGGATGAT
GTTTCATGTGAAGCAATCAAATATTACGTTGATGAGATATCCGATGCAGA
TGAAAGAAAACTGAAAGAGCTGGCAGAAAACGCAGAACTACTTCAATATA
TTGAAGAATCAGGAGAAAGATGCACTCTGACTAAAGAAACAAAGCAACTC
GTGCTTCAGTCATTGATAGTATATGATGTATTAATCAAAAGACGTACCTC
TTATGAGCATATTAGAAAAGGTCTGGAAATTGTTGGAGTTTTAAAAACTC
TACAACTCTACAAAGACTTATGTAAACCCCTTCTAACATATGATGCCCGC
TATGATGATGTAAATCCTGAGAGCATGCTGAGAAACATAACATGTAGCAG
TCAAAATTTGTCACACGGGCCTTTGCTGTCAAAAGTGATCCGTAGAATGA
GCAACAAAGAACTGAAGCAGTTGCTCAAATACGCAACTGCTTCAGATAAT
TTGAACGTATTAAAAGATCAAAACCTTTACGTCAGAGTTGTGCCAGACGC
GGCTGGATTTTTTTCGTCAACATGTTCAATGGAATTGACGGTTCCTGaag
cactttttgaaaatgaggaAATGCTTTTAAATGCCTTCAAATCAGTCATT
ATACCTGGAGAACAAAGTTTCAATGCGTCTTGATTCATGGTTATTAccat
tgactttttttttactttcgtttGTATTACTGATTTAGAAATTAATTTGT
GTataattataggggaattaacATTTTAAATCCGTCAAGAAAAGAACGAC
AGTTTCAAATATACTGCAACTTTTAACACTGACATGAATTGGTGTCAATC
TGAATTCCATTTTTAATAGAAAAAGTTTGACTGGACCAAAAGTTAGggat
tttaaaataatttaagtTGTTCATTCTGTCCAGAAATCTATAAAACTCTG
ATTGATGTCAATTCCCACATGCGTCAAAAGTCGCAgtattttaggcttaa
aattgaTGTTAAACGGCAGT
Run BLAST on NCBI

protein sequence of TCONS_00036623-protein

>TCONS_00036623-protein ID=TCONS_00036623-protein|Name=TCONS_00036623-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MSLHGSTTTPQLDQPLSQRPGGSRSAISLWGSTTTPLSDQPSSQRPGCSR
STVSLQGSTTTPLSDQRPGCSRSTVSLQGSTTTPLSDQQPSQQPGCSRSQ
SQLRELFPNLTDWQVSEISSSYPDLQEAASFAAEISEKNESKADKTLETL
EDVFIYFENKFDSATQILRVHDKDIYSGVLSLYKDKSFDPLKKLRVIIEN
GPGIDAGGLTRHAFDTVFLTLRKSGHSRLFEGNRYSLLPICTTSTALSQI
FVFIGKIIGHALLHGIRVIQIPTVAYYYIITQDITHCLQYLDADDVSCEA
IKYYVDEISDADERKLKELAENAELLQYIEESGERCTLTKETKQLVLQSL
IVYDVLIKRRTSYEHIRKGLEIVGVLKTLQLYKDLCKPLLTYDARYDDVN
PESMLRNITCSSQNLSHGPLLSKVIRRMSNKELKQLLKYATASDNLNVLK
DQNLYVRVVPDAAGFFSSTCSMELTVPEALFENEEMLLNAFKSVIIPGEQ
SFNAS
Run BLAST on NCBI

transcript from alignment at sc0001487:27064..41418+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036623 ID=TCONS_00036623|Name=TCONS_00036623|organism=Clytia hemisphaerica|type=transcript|length=14355bp|location=Sequence derived from alignment at sc0001487:27064..41418+ (Clytia hemisphaerica)
gaaatttcgaccgAGCGTGCACGACCGCGCGGCCGATGGGGGAAATAGGG
TAGGGTCTTTTTAACTGGGTCGATCGAACTGCGAATCGAGCCCTCGATTA
CATTGCCGATCCATTCGGATAATTATCGAAACAAATCGAAGTTTAATCAA
ATTGATTTATTCGGGGAATAGGGCTTGGGAACTAAAGCCGCTTTCCCGAG
CACGAGACTAGCTCCTAGTCCTCTTAGCAACAGGAACATATCGTCAACGA
AAGCAGATAATTCTTCACGTGTAACGTAACCTCGTAACATGTAGGTCAGT
TGTCTTACACATCAAATTGGAATCTNAACATATCGTCAACGAAAGCAGAT
AATTCTTCACGTGTAACGTAACCTCGTAACATGTAGGTCAGTTGTCTTAC
ACATCAAATTGGAATCTATTTAATATGTCTGGACCTTCAATACCATCCTA
TTTATTCTGTTGATGGTAGCATACTGACCAACTTGTAAGTTATAATTTGT
ATCTATAGTATAAAGGCTGTATCTACAGTAGTAACTCCACATGCAGCAGA
CCAGGGATTTAGTCAAAAGGAGGCAGACTtgctcattttcaaaaattttg
ctgctCAATATCTTGCCCATATCTTGAAATAACTTTCAAAGGATCCTTAC
TGAAGATATGGAGATAGAACCATTGAAATACAGCCGAGTGTGGTGTGGGT
AGCTAATGGGCTAGACATCAATTGTCATACGTCATCGAATTTAATCGAAG
CTAATCGAAGCAATTAGTTTTCAATTAATCGAACTAATCTAATACtgtca
acggctctaacttgggacgagtggtcATAATATGGGATGGTTgatttctg
gtctgtattttcacttactgttaatctcccttgacaacaagtttgttttc
tatgaGATTTGCGACTATTATGTTAATTAAAATGACTTCGGAGGTTCGGT
AAATTATGCctgaattgctgtcccatgtttcgtcagactgtcccaagtta
gagccgttgacggtaCTAATCGAAGACTAATCGAACAAATTGAgattaaa
aaaagattggaaaatTTGATTAGTTCTATTAGATTCGATTTAAGCTTCGA
TTACCTTCAATCGAAACTAATCAAAGCTAATCGAAGATTAATTGAATTCA
TTgaaactaatcgaactaattaagaaaaaaattgattgcaAAATTCATTT
ACTTCGATAAGTCTTCAATTAATTTTGATAATCGAAGACTAATCGAAGAC
TAATCGAAGTGATTATTTTCGATGAATTCGATTAAAAATACGTCGTACCT
ACGTCTGGAATCAATAAAATCGATTACCGATTAAGATTGATAGATAATCG
ATATTAATCGATGGATTATAAATATCTATTAAAATCGTTAAACGGTAAAA
AATCGATATTCATAATTATAATCAATATTAATCGATGACGAAAAGCAATC
GATACTAAACGATATTTACAATTTTTTCGACCTCGATTAGCTATCGATTA
TCGATTTTAATCGGTATTTAATCCATCGATTAATATGGATTATCTATCGA
TTTTAACGACCGTCTGGTTTAACCCGTTTTACCATAGTGGGGGGGTTGAC
TTTTGGGTCAAATTTTTTGATTGAAAGAGGAGGGTTGAGGCTATTTTAGT
ATAAAAAGTGCTTAAACAGTCATAAAGTTCCAAAAAAAATCCCCCTACTA
CATTTGGTTCCCTTTTTGTTTATCCTTCCCCTTACATTATTCTTATCTTT
ATAGTAATTGCTACTTACTGATTTTTTAGCCAAGACAATGAATAGTAGTA
GGATTGTAGCAAGGATTCTAGGTTCAGACAACAGTGTATTATCTGAAAGG
AATAGACTTTTTCGGAGAAACAACCGTGATAATGGTACTCCCAAAGCTAA
AAAAGTCAAGATTGTGTCAAAAGATGTTTACCTTCTTGACAAAGAGACAA
CCACAATGCCTCGTGGGGCAGATAAATGCAGCTTGCATCAGAGGAAACAA
GTTATAACAGCGTTTCAGTTAGAAGGGTATCTCACAGAGGAGGAGCTGTA
TGATAGACTTGAGCAATGCTTTTCAGAAGTGTTAGACTTTTCAAGTCCTG
TTCCCAGGTATCTATATATACATCACTTTTTGTTACAGACTCATGTcatc
aaactttcatttttactttgTATTCCAAGAACTGTATCAGAGGAACTCTC
TTGCAAGAATTTAACCTTGCAAGAAATTGACTTCTCCAATTAGCAAACCT
TTTATTTTATTGTGATTTAAAGAAATACTGCAGATATAAATAGGGCTAGG
GGACCCCTGGTTTTGATGGACTTTCATGGTATACGCCACTGAAATCTAGG
CTGAAATCAGTGGTTGACAGATTGGCATTCTTTGAATTCAATTTGAATAT
CCAAAGTGATAATCACTTGTGTCAATTAATGAAGAAGATttgaaagaaga
ttttttttcaacaaatttcatgAAAGTGGAAACCCCAAAAAAGCAAGACT
CACAATATCTAATCTTTTCCAATTCTTTTCGTTGCAAATCACCCTGCACT
TTTTTTATTgctgttcgttcgtctgttaccagcttttctcggggattggc
tcattagtttttgctgatttttggcacaaagatgcaaaacaGTATTCCCC
TAAATGTGACGGAGCACGATTTccggaaagaatttttttcggccgaaaat
accAGAATTATGCCGGAAAACTGGTTCTttagcattttctcgagatttag
GCATAATTCGCcaagatttttaagatttttctacTCAATAAATTAGTTCT
CGTCAAAATAAGGCTTTTCTAAGATAATATTTTTGCAAATTGCTGTAAAA
ATAAGATGATTTAAAGGCAACTAGAGTGGGcgaattttccaaattttctg
cCCCTCAGGGCGAACAATGGTCGCGCTTCGGTGACACTTCCACGCAAATG
ATTCACAAAAATAACCGACCAGAAGAAAAAAGCTTATTTCGACCACTGCC
GTTTTCGGATATAttgaactttcgaatttttcaactcaaagGAAATTTCT
AACGTCAAAACCAAGATATCCTTTTTCGCATATCGGACAGACTGCCATGG
TGGCCACACTCCTGGAAATTCCTGGAATACCCTGGGATTAATGTTTTCTC
CTGAAAAGTCCTTGAAACTCCTGGGATTTCTGGATATTCAAAATCCCTGG
ATAATCTTTTTTCCAGAAGGTTTTGATCCCTCTTAAAAAATTTTTTTTTG
CCTGCGGCGCAATACATTTATTGCCAATTCTTTACAAGCAAAATTTCTTT
GATATTTTGCTCTGTGAAGGTGGGGCTACGTTTTTAAAATTCAGCAAGGG
CTATTTTTCTTAGCCTCCCCCCTGAAAAATGCTGGGGGCTGGACCCCTCT
GCATACTAGATATGTTTAAATATTAATTTTTCTTGTTGAGATTTGACACC
TTTTTATCCTGGAAAATCCTTGATTTTTTCTGTTTTATGCTATTTTGTCC
TGAAATATCCTGGAATTTTATGACCTAAAGTCCTGGAAAAAGTCAAAATT
GTCCTTGAAAGTCCTTGAATTTGCAAAAAATAATTGTGTGGCCACCATGG
ACTGCTAGATATGAAATTATTTTTAATATCATCCCTCCAAAAATTTGTTA
TAAAACTTTTTCATATTCTTATAATTACATAAACAGGGGGGTCAGTACTA
AAATGTAAGACATACATGAGTACTAAAAGGAATTTTGCTAAATTTTGACA
CCCCACCTATTGTTCGAAAGTGTTATTTTAGTACACAAGCACTAAAATTA
TTTTGCCCTTTTACGGCTTTTGATTTACCAAAACATGGCATAGTGCGGAA
GGGGGTCTGGCTTTGGCATCCCCCCCCCACCTTGAAAAATGCCTATCCCC
CAAGGTTTTTGGGCTTTTCGAGTTTGGAAATTAATGCATGGTTTTGACTG
CGTAACACTCAAATACCACACTAAAATTGCCTTATAAATAGGAAATGCAT
TGTAAATTGGGCAAATTTCCCTATTGGAAGTACAAAAGTACAGAAAAATG
CACAATCCTGACCAGAAAAAGAAGATTTCATGTCAGTCCCCCCTTCTTGC
TATCCCCCCCCCCTTTTTGAGGAAAATTTCCAATCCCAATTAAATTGTCC
TAATTTTTATAACAGAAGATGTCTAATTCAGATTACTGGGGAAGCCAAAA
AGAATTTTTATTTTCATTACTTCATTGTTTTTGAAAAGTTATTTTTTTAT
CTGGTATAAATTTATATCATGTTTCTCTCTCGCAATTTAGGTTTGAGTAT
GTCAAGTACATAAGTGGGCAGCTTGTCACGCCAACATTGGGCCATAATGT
GACTTACGATAGCACAACAGTGCTATCAATCTGTCGTCAGGGAGATATCT
ATCTTCGAGCAACCCATGATCTTGTAAGTTTTTTGTATTATAGTTAGCAA
CATTGATTATAAACCCATACACCCTTAAAGGCTATGTATGCATCTTCACT
TCAAACACTTCAGTTTAGATTTTCATGGATGCAGCCAACAGGTTTTGTAT
TTTGATGCACCTACAACTGAGTTCCTAAAGGCTAAGGCCTCAAAATTGCC
TAAATAAGCAAGTTGCTTAGCAACCCTGCAGCCTCAAATccaaattagaa
atttctttcttcacaaataaaaaataactttaataCAATGCTAAAAGTAA
TGCAAATCTCGGAAAAATGGGTTGTTGTAAAAGGTAGTATAGTCCCATGG
GCTACCCCAATGGGGTACCTTTTGGGATACCCAATTATTCCCAATCAGAG
CAATGATCAACACAAATTTGTCGACCACATTGTTCCTCTATCTGTAAACT
GCTAACTTATGACATAAAAGTATCTCTGAAGTATGTTCTGATGAAAAATA
GAATTCTTTATTTCTAGGTTTGTTGGCGgtaaaagtttattttataGCGC
ATGCACTGCATAAGAATCTTTGCTGTTTTCGTAATTCAGCAGATCAGATT
TTGTTTGCAGAATAACTTTGGTATTCAAAATGCTTACTTACTCAATAGGG
GCTAATGGAGATTACTGAAGTGATTGtccttttgtcttttttcaacaaat
tgaggttttgtttaaaaaatatcgTGACAATCATAACATttccaaaagga
atttttatcatACTCAATATGATGCAAGTAGTATGAAAGGATAAGAATCG
GCAGCTGGGAACAACTTGTGAGAGCTGAGGTGTGCGTTTTAGAGGAACAC
AAAATCTCATTAATTATTCATTGGAATTTTACTCACAAATTaacttttgt
ttacaaaaatattaatgTAACAATAATATTTGGAGTCTATCATATCAATT
GATCGAAAAAATAATCTCATACTCAATGTGACGCACATgctataaaagaa
taaaagaagaGGTCAGTCACAAGCCACTTGTCCTGCTAGAAAGCACAAGA
GCAGTCTTAGAGCAAATCAACATTTCAATGAGAGACTCCTGTCTCAATGA
GGAGTAATGTAAGTAGGTCCTTACTTTTCCTTCCAGAGCAATTTCTAATC
TGGTCTGTAATATTTTTTAGGTATCCCAGACAGTACCCCATTGGGGTAGT
CCATGGGACCATACTACCTTTTACAACAACCGCTGAAAATGCCTCTATTG
TCCATTTACAAATGAAGAATAGTTTCTACCCCCTAGACTTAGGGAGGGTC
TTgggatttggaaaattcttTTAAGGGGGATCTTTCTTCTGCTGATTTTT
TAGGTGGCGTCAGCCTTTAGGGGGGATCTTCCTATTTAAGGGGGGtttca
agtttttgtaaaagttttgcCTCGGTGCTAATTTTCTACCACAATTCCAT
CTAAAGTTAATAAATTTGTGCCTGCGGCGCAGTTAATGTTACAGTTTATG
TGTCCAAATGACAATGGCTGCAAAAAACAACATAATGACATCGCAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNcatcaacccaaatttttttctatgaactcc
ttttatggtagagaacatttatgccaaatttcaagtccatatcttttata
gatcaaaagttatgcaaggctggtagaaaacacccccccttgagaataca
aaatccgaaaaagcctgataataatagggttaagttACTGTTTATTATTT
CCTAATGCTTTGGTATTATTTAAGCAAATAGCAATTAATAATTGCACCTA
AATGAAAAATGTTTGATTCATTATCAGGTAGGTCCATATAAGTATAGCTT
GTTAAGGGGGGTCTTAACCTCACTAGAAACTATTTGTTGAAAAATGCAAC
AGTGTGATGTCCTTCACCCAATGAAATCTTGAAAATTTTTAAGCAACCTT
GCAAGCAACTTTGGACCTGGGTTTTGAAAAATGCTTAGCAACTCAGTTAT
TAAAAATAAATGTGTATGGAGTTGCTTTATGTGTATCTGAATTTACGCTT
TTTGGACCTACCTTGGAGGTCCTATAAATCAACCGTTGTCCTGCCATTCG
TTTGTTACCAGCTTTTCTTGAGATTGGCTCATTGGTTTTTTTCTGATTTT
TGGCACAAAGATGCAAAATGGCAATTCACAAAATGTGATGGAGCCCGATT
TCCGAAAAAAAATCATTTTCGGCCAAAAATGCCGGATGCTGGAAAAACCA
GTTTTTTGCCATTTTCTTGAGATTTCATCATTTGTTTTTCCTGATTTTTT
GCACAGAGATCCGTATTAGGAATGCTCAAAATATAACCCAGTCCGATTTT
TGAGGAATTATTTCTTTGTTTTTAATCACATAAATAATTGTTGAAAGCAA
TTTCTGATATTTTCTAAAAATTGCCGGAACAGCTGGTTGCCGTGCTGGAA
AAAACAGGTTTTCTTTATTTTCTCGAGTTGTACTCAATTCGTTCATGAAT
TTTTGCTTACGTTCGTTCGTTTTTTAGGATCTTTTCCATTAATGTCTATA
ATTGCTCTCATTTGTTTAACTTTCATTATCAGGTAGGTCCAATTAGCATT
CAGCTTGTTTATCTGAAAATTTCTGTTGTCCACCCCCCTCAGCTACCAAA
TTGCTTGAAATTGATGAATATATAGGACAGGACCTTCACTGATATTTTCA
TTTATTTTTTTAGAAAAACATTGAAGTAGATGGTGCTAGTCCCGACAATA
GTTTGGAAGTAATTTCTTGCATTATTTACAGTTTCCTTTTTTATTTGTCA
TTTTTCTCTCTGAGTAATTCTTAATAAAAGGCCAGAAAAGGCATCTTTTT
TGAGTGTACTACGAAGCTTCAATGTTTCAATAAAAAATATTTTAAGATAA
AAAATTTTTGTATGGAAATCCATCAGTGCCATTTAGATTCTCCTTTAATT
TTTTAACGACCAAACTAAAAAAAAGACTATGGAACTAAAGAATTGACAGC
ATAACTTAAAAATGGTTGTTTCATTTCGTTGTTgaaaaaatcgacaaaaa
tgatgaaaaattatttcaaaatggcggcacTGATGGTTGCAAAATGGATT
TTGATTCTGGTGGATTTTGATAGTGTCTgctgattttcattggatttttt
cattaaatttttgtcctttttcacacaaaaacactATGGTTAACAATGCC
CATGATaaagcatgattcaattatcaattaaactgatttttgctaGAAAA
GCGGTTTTTCTTTCTCGAGCTGCATTTGACAAATTCTTCGTTAAATTTCG
CACCACATCGCAGCACATTGGTGCAAAAtaacaatgcctaaaatgtgaca
gcccatttttcaaaaaacattttttcctggCAGAAAATGCTGAGAAAAag
ctggaaaatttttttttattccttttttttttaatggcaGAATGCCTTGC
TGCAGCACCGAGGAACATCCTCAACACCATCAACAATGTCATTGCATGGT
TCGACCACAACACCACAATTAGACCAACCACTATCTCAACGGCCAGGTGG
CTCAAGATCAGCAATTTCATTGTGGGGTTCAACCACCACACCGCTATCAG
ACCAACCATCATCTCAACGCCCAGGTTGCTCAAGATCAACAGTGTCATTG
CAGGGTTCAACCACAACACCACTATCAGACCAACGCCCAGGTTGCTCAAG
ATCAACAGTGTCATTGCAGGGTTCAACCACAACACCACTATCAGACCAAC
AACCATCTCAACAGCCTGGTTGCTCAAGATCTCAGTCACAGTTAAGGGAG
TTATTCCCAAATCTAACAGACTGGCAAGTGTCCGAAATATCTTCATCATA
TCCGGATTTGCAAGAGGCAGCAAGCTTTGCTGCTGAGATCAGTGAGAAAA
ATGAGAGTAAAGCTGATAAAACATTGGAAACGCTAGAAGATGTCTTCATA
TACTTTGAGAACAAATTTGATTCAGCAACTCAAATTCTTAGAGTTCATGA
CAAGGATATATATTCAGGGGTCCTGTCACTTTACAAGGACAAAAGTTTTG
ACCCACTGAAGAAACTTCGGGTTATCATTGAAAATGGGCCTGGCATAGAC
GCTGGTGGTCTTACTAGACACGCCTTTGACACAGTCTTTCTTACTCTCCG
CAAATCAGGACACAGCCGTTTATTTGAGGGCAATAGGTATTCCCTTCTGC
CCATTTGTACCACATCAACTGCACTGTCAcagatttttgttttcattggg
AAAATCATAGGGCATGCTTTGTTGCATGGCATCCGAGTGATTCAAATTCC
TACAGTAGCCTACTATTACATTATTACACAAGACATCACACATTGTTTGC
AGTATTTAGATGCGGATGATGTTTCATGTGAAGCAATCAAATATTACGTT
GATGAGGTAGGTATGAAGCCAGGGTCAAGCTGTTACTCTAGGGTCGAACT
AACTGCTTATTGCCCCCTGTATGAAGCTCTAAATCTTTGACATACAGAAG
TTTTAAGGGTTCTTATCTGTTAGTTTGTTGCTGTTTTTGATATGCATCAA
TGTTCAATGTTCGGCCCCATAAGTAGCATGTTGGAAATCTAAATCTTTAC
CAAACTTTCCTCGCTAAAAATTAGTTCGTGCAGAAGAAGAACTTTTcctc
taaaaattaaaaaagtttcattGTAAAAGCCTCAACCTTTTCGAAGATAT
CGAAGACAATATAAGGTACCAAGAAAACTAGAGCTTACCCAATTGGTGTG
ATACCTAAAAATAGCATTAGAAGTCATTGTACTGTAAGGAATTCTAACGT
TATTTCGAACTGGCGTCAAAATTAACTGACGCTGGAAGAAAACTTccgaa
aaaaagacaaaattgtgaaaaatgaCAATCCTCTATTTCAACCTTGTATC
TTCCAAATATATGGAGAATGTTGAATTTTACCACAGATATCGAAAGATGA
GGGGTTTGAGCTTCTATACATCTAAAAATTGACGCATTCTACCTCACTAT
TGAGTGTGATATTTCTCTTCAAATTTTATCACGCAAACTGGGTAAGACTA
CCGCCAGCTGGGTAAATCAAAAATGACTTTCAAACTGCTATAATTGAAAA
ACTAAATCAAACTGATTAAATGAAATAAGTGTTTTGTACTCCCTTCCTTA
GTGGCTATCTAAATGTGAAAAGAAGTCCCAGTAAGATATACGGCCGATGT
AAATAAACAGGAATCTTTATAAATTCACGCCAACTGGGTACCACACTCTA
GCCATGCAAAAATAAAGTGATAAAAGTAATTAACAAGTATTTTATATTGA
CTGAAATTGTAAAAATTAACATTTAAATTTGATTTCTTTATGATAACTGG
ATACTGTAGGAAAATATTGACCAGCCTTGTTACCTTAATTGGATTAATTT
TCGCATGGACTAAATTTAGCAAATCAGCTTTTTTTCACCTAATTTCTTTC
ACTTTCCTAGGGGTTTTGGCAAAAATTTCAATCAAAAAAACTTCGCGTTG
ACAAAATTTCGTGAAAATGGCCAAAATTCGCGAAAATTAATCCACGCCAA
AATTAATCCACTTAATAAGGTACATCAATATTATCCAATCAGTTTTCTTA
AAAATGATTGACAGTTGTATTACAAGGCTTAAAACAATACAATTTAGTGA
GTCAGCTCAGACCCACTGATTGTGTATATAGTTGCTAAAGAAGAGCTTAG
CACAATACAACTAATTTTATATATTCTCTATAATGTGTTCCAGCAGTTCG
TAACTTAAAAATTTTGTTTTTCCTAGATATCCGATGCAGATGAAAGAAAA
CTGAAAGAGCTGGCAGAAAACGCAGAACTACTTCAATATATTGAAGAATC
AGGAGAAAGATGCACTCTGACTGTAATGCTATTTTTGCTTGAATCATTTT
TTTGACAATCAGCATAGAGCAACACTGGCATTATTCAGACCAGAGTTAAA
AGGGGCATAATAAAATTACTAACAACTTTGCAAACAAACTGTCTGAAGCT
GGGTACAAAATCAGGGTTCCCAACGGTCAGGGAAATACTTGAAAACCTGG
AAAGTAGATTTTTCAATATCTTTCTTTGATCAGAAGCTACAGCCCATATA
AGTGGATCCACTTTTACCCTTTTTGACagtttttgcttgtttttgctcac
ttcaaagggctgtaacttttgatccgAGAAAGAAATCTGAGCACAGATTT
GGAATCAACTTTTAtcttaaattttcaataaaaaacttgaccaattaaaa
tattcaaaaaatgggaATCTCTCTGTAAAACATTCATTCGTTTGTGCTAT
TTTTGCCGTGACAGCTTGATGTGTTGTGAGTATGTTTAAAGTGATTGCTC
TCACATTTCCTTTCTACATTTATAAAGAAGCACACTTTTTCACTTGTGAA
TTCTGATCTCGTTTCTTCAGTAAACTGtgacaaaattttaaagttttttt
tgaccAGATAGTTATTCTTTTTTAAGTCAGCAATTCATATCCTAGATTGA
GACAATATCTAGGGCGTTTCAAAGCTactcttaatttttttaaagtaatg
ATCGATTTTTCTTTTAGAAAGAAACAAAGCAACTCGTGCTTCAGTCATTG
ATAGTATATGATGTATTAATCAAAAGACGTACCTCTTATGAGCATATTAG
AAAAGGTCTGGAAATTGTTGGAGTTTTAAAAACTCTACAACTCTACAAAG
ACTTATGTAAACCCCTTCTAACATATGATGCCCGCTATGATGATGTAAAT
CCTGAGAGCATGCTGAGAAACATAACATGTAGCAGTCAAAATTTGTCACA
CGGGCCTTTGCTGTCAAAAGTGATCCGTAGAATGAGCAACAAAGAACTGA
AGCAGTTGCTCAAATACGCAACTGCTTCAGATAATTTGAACGTATTAAAA
GATCAAAACCTTTACGTCAGAGTTGTGCCAGACGCGGCTGGATTTTTTTC
GTCAACATGTTCAATGGAATTGACGGTTCCTGaagcactttttgaaaatg
aggaAATGCTTTTAAATGCCTTCAAATCAGTCATTATACCTGGAGAACAA
AGTTTCAATGCGTCTTGATTCATGGTTATTAccattgactttttttttac
tttcgtttGTATTACTGATTTAGAAATTAATTTGTGTataattatagggg
aattaacATTTTAAATCCGTCAAGAAAAGAACGACAGTTTCAAATATACT
GCAACTTTTAACACTGACATGAATTGGTGTCAATCTGAATTCCATTTTTA
ATAGAAAAAGTTTGACTGGACCAAAAGTTAGggattttaaaataatttaa
gtTGTTCATTCTGTCCAGAAATCTATAAAACTCTGATTGATGTCAATTCC
CACATGCGTCAAAAGTCGCAgtattttaggcttaaaattgaTGTTAAACG
GCAGT

Coding sequence (CDS) from alignment at sc0001487:27064..41418+

>TCONS_00036623 ID=TCONS_00036623|Name=TCONS_00036623|organism=Clytia hemisphaerica|type=CDS|length=4554bp|location=Sequence derived from alignment at sc0001487:27064..41418+ (Clytia hemisphaerica)
ATGTCATTGCATGGTTCGACCACAACACCACAATTAGACCAACCACTATC
TCAACGGCCAGGTGGCTCAAGATCAGCAATTTCATTGTGGGGTTCAACCA
CCACACCGCTATCAGACCAACCATCATCTCAACGCCCAGGTTGCTCAAGA
TCAACAGTGTCATTGCAGGGTTCAACCACAACACCACTATCAGACCAACG
CCCAGGTTGCTCAAGATCAACAGTGTCATTGCAGGGTTCAACCACAACAC
CACTATCAGACCAACAACCATCTCAACAGCCTGGTTGCTCAAGATCTCAG
TCACAGTTAAGGGAGTTATTCCCAAATCTAACAGACTGGCAAGTGTCCGA
AATATCTTCATCATATCCGGATTTGCAAGAGGCAGCAAGCTTTGCTGCTG
AGATCAGTGAGAAAAATGAGAGTAAAGCTGATAAAACATTGGAAACGCTA
GAAGATGTCTTCATATACTTTGAGAACAAATTTGATTCAGCAACTCAAAT
TCTTAGAGTTCATGACAAGGATATATATTCAGGGGTCCTGTCACTTTACA
AGGACAAAAGTTTTGACCCACTGAAGAAACTTCGGGTTATCATTGAAAAT
GGGCCTGGCATAGACGCTGGTGGTCTTACTAGACACGCCTTTGACACAGT
CTTTCTTACTCTCCGCAAATCAGGACACAGCCGTTTATTTGAGGGCAATA
GGTATTCCCTTCTGCCCATTTGTACCACATCAACTGCACTGTCAcagatt
tttgttttcattgggAAAATCATAGGGCATGCTTTGTTGCATGGCATCCG
AGTGATTCAAATTCCTACAGTAGCCTACTATTACATTATTACACAAGACA
TCACACATTGTTTGCAGTATTTAGATGCGGATGATGTTTCATGTGAAGCA
ATCAAATATTACGTTGATGAGATATCCGATGCAGATGAAAGAAAACTGAA
AGAGCTGGCAGAAAACGCAGAACTACTTCAATATATTGAAGAATCAGGAG
AAAGATGCACTCTGACTAAAGAAACAAAGCAACTCGTGCTTCAGTCATTG
ATAGTATATGATGTATTAATCAAAAGACGTACCTCTTATGAGCATATTAG
AAAAGGTCTGGAAATTGTTGGAGTTTTAAAAACTCTACAACTCTACAAAG
ACTTATGTAAACCCCTTCTAACATATGATGCCCGCTATGATGATGTAAAT
CCTGAGAGCATGCTGAGAAACATAACATGTAGCAGTCAAAATTTGTCACA
CGGGCCTTTGCTGTCAAAAGTGATCCGTAGAATGAGCAACAAAGAACTGA
AGCAGTTGCTCAAATACGCAACTGCTTCAGATAATTTGAACGTATTAAAA
GATCAAAACCTTTACGTCAGAGTTGTGCCAGACGCGGCTGGATTTTTTTC
GTCAACATGTTCAATGGAATTGACGGTTCCTGaagcactttttgaaaatg
aggaAATGCTTTTAAATGCCTTCAAATCAGTCATTATACCTGGAGAACAA
AGTTTCAATGCGTCTTGAATGTCATTGCATGGTTCGACCACAACACCACA
ATTAGACCAACCACTATCTCAACGGCCAGGTGGCTCAAGATCAGCAATTT
CATTGTGGGGTTCAACCACCACACCGCTATCAGACCAACCATCATCTCAA
CGCCCAGGTTGCTCAAGATCAACAGTGTCATTGCAGGGTTCAACCACAAC
ACCACTATCAGACCAACGCCCAGGTTGCTCAAGATCAACAGTGTCATTGC
AGGGTTCAACCACAACACCACTATCAGACCAACAACCATCTCAACAGCCT
GGTTGCTCAAGATCTCAGTCACAGTTAAGGGAGTTATTCCCAAATCTAAC
AGACTGGCAAGTGTCCGAAATATCTTCATCATATCCGGATTTGCAAGAGG
CAGCAAGCTTTGCTGCTGAGATCAGTGAGAAAAATGAGAGTAAAGCTGAT
AAAACATTGGAAACGCTAGAAGATGTCTTCATATACTTTGAGAACAAATT
TGATTCAGCAACTCAAATTCTTAGAGTTCATGACAAGGATATATATTCAG
GGGTCCTGTCACTTTACAAGGACAAAAGTTTTGACCCACTGAAGAAACTT
CGGGTTATCATTGAAAATGGGCCTGGCATAGACGCTGGTGGTCTTACTAG
ACACGCCTTTGACACAGTCTTTCTTACTCTCCGCAAATCAGGACACAGCC
GTTTATTTGAGGGCAATAGGTATTCCCTTCTGCCCATTTGTACCACATCA
ACTGCACTGTCAcagatttttgttttcattgggAAAATCATAGGGCATGC
TTTGTTGCATGGCATCCGAGTGATTCAAATTCCTACAGTAGCCTACTATT
ACATTATTACACAAGACATCACACATTGTTTGCAGTATTTAGATGCGGAT
GATGTTTCATGTGAAGCAATCAAATATTACGTTGATGAGATATCCGATGC
AGATGAAAGAAAACTGAAAGAGCTGGCAGAAAACGCAGAACTACTTCAAT
ATATTGAAGAATCAGGAGAAAGATGCACTCTGACTAAAGAAACAAAGCAA
CTCGTGCTTCAGTCATTGATAGTATATGATGTATTAATCAAAAGACGTAC
CTCTTATGAGCATATTAGAAAAGGTCTGGAAATTGTTGGAGTTTTAAAAA
CTCTACAACTCTACAAAGACTTATGTAAACCCCTTCTAACATATGATGCC
CGCTATGATGATGTAAATCCTGAGAGCATGCTGAGAAACATAACATGTAG
CAGTCAAAATTTGTCACACGGGCCTTTGCTGTCAAAAGTGATCCGTAGAA
TGAGCAACAAAGAACTGAAGCAGTTGCTCAAATACGCAACTGCTTCAGAT
AATTTGAACGTATTAAAAGATCAAAACCTTTACGTCAGAGTTGTGCCAGA
CGCGGCTGGATTTTTTTCGTCAACATGTTCAATGGAATTGACGGTTCCTG
aagcactttttgaaaatgaggaAATGCTTTTAAATGCCTTCAAATCAGTC
ATTATACCTGGAGAACAAAGTTTCAATGCGTCTTGAATGTCATTGCATGG
TTCGACCACAACACCACAATTAGACCAACCACTATCTCAACGGCCAGGTG
GCTCAAGATCAGCAATTTCATTGTGGGGTTCAACCACCACACCGCTATCA
GACCAACCATCATCTCAACGCCCAGGTTGCTCAAGATCAACAGTGTCATT
GCAGGGTTCAACCACAACACCACTATCAGACCAACGCCCAGGTTGCTCAA
GATCAACAGTGTCATTGCAGGGTTCAACCACAACACCACTATCAGACCAA
CAACCATCTCAACAGCCTGGTTGCTCAAGATCTCAGTCACAGTTAAGGGA
GTTATTCCCAAATCTAACAGACTGGCAAGTGTCCGAAATATCTTCATCAT
ATCCGGATTTGCAAGAGGCAGCAAGCTTTGCTGCTGAGATCAGTGAGAAA
AATGAGAGTAAAGCTGATAAAACATTGGAAACGCTAGAAGATGTCTTCAT
ATACTTTGAGAACAAATTTGATTCAGCAACTCAAATTCTTAGAGTTCATG
ACAAGGATATATATTCAGGGGTCCTGTCACTTTACAAGGACAAAAGTTTT
GACCCACTGAAGAAACTTCGGGTTATCATTGAAAATGGGCCTGGCATAGA
CGCTGGTGGTCTTACTAGACACGCCTTTGACACAGTCTTTCTTACTCTCC
GCAAATCAGGACACAGCCGTTTATTTGAGGGCAATAGGTATTCCCTTCTG
CCCATTTGTACCACATCAACTGCACTGTCAcagatttttgttttcattgg
gAAAATCATAGGGCATGCTTTGTTGCATGGCATCCGAGTGATTCAAATTC
CTACAGTAGCCTACTATTACATTATTACACAAGACATCACACATTGTTTG
CAGTATTTAGATGCGGATGATGTTTCATGTGAAGCAATCAAATATTACGT
TGATGAGATATCCGATGCAGATGAAAGAAAACTGAAAGAGCTGGCAGAAA
ACGCAGAACTACTTCAATATATTGAAGAATCAGGAGAAAGATGCACTCTG
ACTAAAGAAACAAAGCAACTCGTGCTTCAGTCATTGATAGTATATGATGT
ATTAATCAAAAGACGTACCTCTTATGAGCATATTAGAAAAGGTCTGGAAA
TTGTTGGAGTTTTAAAAACTCTACAACTCTACAAAGACTTATGTAAACCC
CTTCTAACATATGATGCCCGCTATGATGATGTAAATCCTGAGAGCATGCT
GAGAAACATAACATGTAGCAGTCAAAATTTGTCACACGGGCCTTTGCTGT
CAAAAGTGATCCGTAGAATGAGCAACAAAGAACTGAAGCAGTTGCTCAAA
TACGCAACTGCTTCAGATAATTTGAACGTATTAAAAGATCAAAACCTTTA
CGTCAGAGTTGTGCCAGACGCGGCTGGATTTTTTTCGTCAACATGTTCAA
TGGAATTGACGGTTCCTGaagcactttttgaaaatgaggaAATGCTTTTA
AATGCCTTCAAATCAGTCATTATACCTGGAGAACAAAGTTTCAATGCGTC
TTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021622XLOC_021622Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036623-proteinTCONS_00036623-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036623-exon-sc0001487-1491911889:27064..27373TCONS_00036623-exon-sc0001487-1491911889:27064..27373Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:27064..27373TCONS_00036623-exon-sc0001487-1510915933:27064..27373Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:27064..27373TCONS_00036623-exon-sc0001487-1575043694:27064..27373Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:27466..27547TCONS_00036623-exon-sc0001487-1491911889:27466..27547Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:27466..27547TCONS_00036623-exon-sc0001487-1510915933:27466..27547Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:27466..27547TCONS_00036623-exon-sc0001487-1575043694:27466..27547Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:31354..31486TCONS_00036623-exon-sc0001487-1491911889:31354..31486Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:31354..31486TCONS_00036623-exon-sc0001487-1510915933:31354..31486Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:31354..31486TCONS_00036623-exon-sc0001487-1575043694:31354..31486Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:36727..36771TCONS_00036623-exon-sc0001487-1491911889:36727..36771Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:36727..36771TCONS_00036623-exon-sc0001487-1510915933:36727..36771Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:36727..36771TCONS_00036623-exon-sc0001487-1575043694:36727..36771Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:37454..38419TCONS_00036623-exon-sc0001487-1491911889:37454..38419Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:37454..38419TCONS_00036623-exon-sc0001487-1510915933:37454..38419Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:37454..38419TCONS_00036623-exon-sc0001487-1575043694:37454..38419Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:39790..39885TCONS_00036623-exon-sc0001487-1491911889:39790..39885Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:39790..39885TCONS_00036623-exon-sc0001487-1510915933:39790..39885Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:39790..39885TCONS_00036623-exon-sc0001487-1575043694:39790..39885Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1491911889:40581..41418TCONS_00036623-exon-sc0001487-1491911889:40581..41418Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1510915933:40581..41418TCONS_00036623-exon-sc0001487-1510915933:40581..41418Clytia hemisphaericaexon
TCONS_00036623-exon-sc0001487-1575043694:40581..41418TCONS_00036623-exon-sc0001487-1575043694:40581..41418Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001487supercontigsc0001487:27064..41418 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.146299	0.282806	0.0856823	0.213989	0.815482	0.676038	0.400593	0.339643	0	0	0	0	0	0	0.0956269	0.520679	0.119786	0.586603	0.341196	0.807571	0	0	0.220405	0.177676	0	0	0	0	0.168863	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036623 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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