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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036616 ID=TCONS_00036616|Name=TCONS_00036616|organism=Clytia hemisphaerica|type=transcript|length=156bp
CCAGGATGCAGTTCTTTGGGAACTTATCGAGGTCAACCAAAGATTGTTGG
CAATTACCCAGGTCCGGTAACGCTTGTTGTGATTTCAATATCTGGAGGAT
TGCTGAGATGTCCTGTGATTGACGTTTTACAACAGTGGTCAGTGATTCAA
CCTCTC Run BLAST on NCBI transcript from alignment at sc0001486:23097..24563- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036616 ID=TCONS_00036616|Name=TCONS_00036616|organism=Clytia hemisphaerica|type=transcript|length=1467bp|location=Sequence derived from alignment at sc0001486:23097..24563- (Clytia hemisphaerica)
CCAGGATGCAGTTCTTTGGGAACTTATCGAGGTAAGTTTTTCTTTGAGAT
TCACAAAATTTAAGAACGAATATTACGATGCATCTTAATCTATAAAATAT
CACGGATACCAAACCTGATTAAAGAAAGTCAATTAGATTCAAACTATACT
TGAAATTTCCAAATAAACCTCGTCACTTGTACGATTTGCATTAACTTTCC
AAAAATAAAGTGGATTTTAATTTTGACAACTCAAAGGCAATAGGCTTATA
ACATCTTAATTCTTCAAAAGGGCTATATTATTACTTATTTTTAAAACTTT
ACACCTATTTCTAGAAAACCCAGTAATATAAAATTGTTCTTGTAAAAAGT
GTGTACTTTAGTTAGATCAATTTTTTGCAAGATGGACTTTTTTATCAGAT
TGAAGAACAAATGCATTTTCAGTTTTTTTTGTTTGTTTTTTTGACCCACT
TAAGTCTTGCAAAAAGTATCAGATTAAAGTACAGTCTAGGGATTTGAGGC
TGGTGGCAGTTTGATGTGCTTTCGGTACTGTCTCATTTTCTCACCAAGCT
TTGAGGCAACATGCCCTTTGTTGAAATCAAACCCAGGCTCAAGGTTAAAC
TCTTCCTTGAGCTGTGCAAAAACAATCCGGACACGTGCCTCGTTCAATTT
CAAAAGCCCATAACCTCCGCCTATATTGCCAGTTTTTAATTCATAAGCAT
GGAATTCGGTTTTCATTAATGCTAAGCCACGCAAAGCTATTTTCTCAACT
TCAGTGCTCTTCAACTCTTCACTTCGGTCCCTCACCAATCGGGGGGTGTT
GTCTTGGGTGTGTATCGATGATTGAGCAAATCGATTTGTCNAATTCATAA
GCATGGAATTCGGTTTTCATTAATGCTAAGCCACGCAAAGCTATTTTCTC
AACTTCAGTGCTCTTCAACTCTTCACTTCGGTTCCTCGCCAATCGGGGGG
TGTTGTCTTGGGTGTGTATCGATGATTGAGCAAATCGATTTGTTGCTTGG
GTGTTGTCTTGGGGGTGTATCGATGATTGAGCAAATCGATTTGTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTC
TTGGGGGTGTATCGATGATTGAGCAAATCGATTTGTTGCTTGGTTGTTGT
CTTGGGGGTGTATCGATGATTTAGCAAATCGATTTATTGCTTGGTTGTTG
TTGTTTCTGTTTGTTGAAATACCATTAATCTGAAGTACCTCATCCAAATA
CGTACTGTCCAAATTAGTAAAAATTAAATTGCTAGCTTCTAGGTCAACCA
AAGATTGTTGGCAATTACCCAGGTCCGGTAACGCTTGTTGTGATTTCAAT
ATCTGGAGGATTGCTGAGATGTCCTGTGATTGACGTTTTACAACAGTGGT
CAGTGATTCAACCTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036616-exon-sc0001486-1575043694:24533..24563 | TCONS_00036616-exon-sc0001486-1575043694:24533..24563 | Clytia hemisphaerica | exon |
| TCONS_00036616-exon-sc0001486-1575043694:23097..23221 | TCONS_00036616-exon-sc0001486-1575043694:23097..23221 | Clytia hemisphaerica | exon |
| TCONS_00036616-exon-sc0001486-1510915933:24533..24563 | TCONS_00036616-exon-sc0001486-1510915933:24533..24563 | Clytia hemisphaerica | exon |
| TCONS_00036616-exon-sc0001486-1510915933:23097..23221 | TCONS_00036616-exon-sc0001486-1510915933:23097..23221 | Clytia hemisphaerica | exon |
| TCONS_00036616-exon-sc0001486-1491911889:24533..24563 | TCONS_00036616-exon-sc0001486-1491911889:24533..24563 | Clytia hemisphaerica | exon |
| TCONS_00036616-exon-sc0001486-1491911889:23097..23221 | TCONS_00036616-exon-sc0001486-1491911889:23097..23221 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001486 | supercontig | sc0001486:23097..24563 - |
Blast
The following BLAST results are available for this feature:
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