TCONS_00036606 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036606
Unique NameTCONS_00036606
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6011

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036606 ID=TCONS_00036606|Name=TCONS_00036606|organism=Clytia hemisphaerica|type=transcript|length=6011bp
TACTGCGAAAGCTGACAATGCTGATGTTCTCACTGCGAATGCTGACAATG
CTGAAGTTCTTACTGCGAATGCTGACAATGCTGCAGTTCTTCTCTCTGCG
AAAGCTGGCAATGCTGAAGTTCTTATTGCGAAAGCTGACAATGCTGAAGT
TCTTACTGCGAAAGCTGACTATCCTGAAGTTCTCACTGCGAATGCTGACA
ATGCTACAGTTCTCACTGCGAAATCTGACAATGCTGAAGTTCTTACTGCG
AATGCTGACAATGCTGAAGTTCTTACTGCGAATGCTGACAATGCTGAAGT
TCTCAATGCAAATGCTGACTATCCTGACGTTCTCACTGCAAATGCTGACT
ATCCTGAAGTTCTCACTGCGAATGCTGACAATGCTGAAGTTCTTACTGCA
AATGCTGACTATCCTGACGTTCTCACTGCGAAAGCTAACTATCCTGAAGC
TCTCACTGCGAATGCTGACAGTGCTGATGTTCTCATCATAAATGCTGACA
GTCCTGATATCGCTCCAAACTCTGTCAATCCAGAAAACGTTGCTTTGAAG
ACCAGAAAAGATAAGATAAAGAAATCACTTTTAGATTTTTATAAAAAAGC
AGATACAATGAGAAATAAACTTGATGAGCCCGTATATCATAAAAAGTCAT
TTTCATTCAGACCAAAAAAAAAAAGAATCACACAAATTTAATGCTCTTGT
TTTTTCAAGGCATTTTCAAAATTACAAGGCCATGACATCAGTTAATATGC
CTTCTGATTGCACAACATTTGACAGATTCTTGGATTCAGTTTTTCCTCCA
ATGGAAATAACGTCGACAAAATACGAAACAATTTTCACTCGGGCCAAGTT
TTCTACATCTGAAACGGAAAAAAGACTGAAGGCATTCCTTTGCGGTTCTT
TTACACCGATTCCTGTATGCAGCTCATCTTCAAATTTCTTCGATTTTCTC
AAACTTGGCTATGTGCTTCCGCAGTTCACACTTGCTGACTCGCAATGTCA
TCTTGAATTTTCTTGTGAAATATGTCCTTTGTATGGTGACTTTATATGAA
ATCTCAAGGTAGTGGATGCAATATCGGTCTCGGCAGATTTCAAGGTTTTC
GTCAGCTTTATGATCACTCAATTACATCGCACCATAAAGAAGCGATTCAA
TTTTTTGAAAGGTCAGTCTGTCAGGACTTTTCAGCAAGTTTAAAAAAGAA
ACCAGATCAATACATCAGTAATTACTTCAAGTCGACTGGAAAAGGAAGAA
CAGTAGCATGTCATTTTTTCTGGGATCATCATTTTGTTCAAGAATTGAAG
GATAAAAGAAACATCCGAAGTATGCAGCCCAAAACTCTCTtcaagaaaaa
agaattgtGGAAAAAATGCGCTCCTGAACATGGCCATGCTGCTTGTTCCA
AGTTTGATAAATGGCGGGAAAAGCATCTTCAAGACTACAATGAACTCAAT
TATGAGTCAAAGCAATCATACAGGTCTGTGTTTGTACCTGGTAAGTCGGT
CATCATATTAAATGGTAAAACTCTTGAAATTGACGGAGGCATTAAATCTT
TGGATCCTCCATGTTTGGGTACTGCTTTCAATGTTGGTCCACGTCCATTT
ACATGCATCAATTGCTATACACAACGAGTTTCTTTCAAAGATCTCATTTC
CAAGCGACAAAATGCTTCCTTGCCAACACGTGAGTCAAGAATCGGCCAAA
GAGGTTTACGAACTTCTTATGCAACTAAAGAAGAAATGGACGAGTATAAC
ATCAGCATCGAGAAAGAAAACAAGGAACTGAAGTTGCAAAACAAAAGACT
TTCCAGAACCCTTTATAGCAAAAAGGCGTGGCAAAAAATTCTAACGCAGT
CCTATCTGGATGACGACATTAAGAAAATGACTATCGATCTCATCTCACTC
TTTGAACAACGCGATAAGCGGGAATCCATACAGTTTGCTTTACTGAAGAA
TCTGCTCCTAAAAATGAAATCTGGGGTGAATCACAAGTTTACTTTGCTGA
TAAAAAACGTTGCGTGCCTCTATAAAAACCACCTTGGAACCACCAATTAT
AGTCTTTTACAAAGCCTTTTTGGATTGCCAGGAAAAACATGTGCTTCTGA
CCATGCGAAACCTGCGAAGATCAACCTTGGATTCAACAACAACGCCATTG
AAACTGCTACTGAGCGGTATGCTAATCGTCCTGTTGTGGAATGTTCCGAC
GAGGCAAGAACATTGCGTTATATTTCTCCACTCATGGACCAAAATGGCAA
AATTGAATTGATAGGTCAATGCTGGGACGCTGATTTGAACCGATGGAATG
ACGAAAGAAAGTATTTAGATGATATCCTTTCAAAGAATTCAATTGATCAG
TACTCTGCTTTGAAAGATTATGTGGATGGAATTATTAAAACAAATCAACT
TGCCAAAGACACCGCAATCCACAATTTTACATCAGGATCTGGAATAGCGA
GTGAACCAATTGTGTTCCTTGTATGGCCAACCCCTAACTCTGGTTATTGT
GGTCCCCATCTACTTAAGATCTGGGATGTGATTagaacaaaatctttttt
gaacgAAGACAATAGCTTAAAAATCAACCCGTTGAATTTGATCGGTCACT
CGACCGACTCCGCTGGCTTTCAATTGGCAGCCGCATTATCCTTGATGTCC
CCCAACAAGGAAGCTATGAAGGAAGGCGTCAAGTACTTAACATTGGGCAT
TGGAGAAAGTTGTTATGCTTCACCCTACTTCGGTCCATTGCCTTCAATAG
CATTTCTCGATTACGACCATGGATTGCGCCTCTTTTTGAGATGTCTCAAA
TACAATACGTTGGAAATGAACTTTTTCCCGAACCCCAAAGTGACATACAG
TGCTGCCATAACGCACCTGAAAGAGTTAAAACTAAAGTGCGACGAAACGG
AAAGTTCATTAGAGTGCCCGTTCAGCAACAATGATTTGTTGTTTGCGCGT
TACCTAGATCAAAATTGTGATGCTGCAATTAAAGTATTTCAACCTAGTGT
CGCTGATATGCTGGAAAAGAATGTGAACGGAGCAGAGGGGACTGTGCTTT
ACTTGCGTGCCGTCATCTATTTGTTCGAGCCCTTTTTAAACCCATCGTCC
GATCCAATATACATGCAAACAAGTATCTCAACTGGCATAACTGTCCTGCG
AATTTGGAGGAAGATACTTCAGCTTAAGAAGAAAAGATTGACAGCTGCAC
CGAAAGCTGCAAAGGAGCCAGCAAAGAGAAGTTTCTTCTTAACTTATGGT
TGCTACAAAACTGCGGAAATTTTATTTGCGAGTGCAACATCTTACATGCT
GaccatttttttacatttcaaacATCTTGGCCCGACTGCGTTATCTCCAT
TCAAATGTGGAACCAAAGCCACAGAGCGCATCATCAGTGAAGTCCAGGGT
AAGACGAACCAATTCCAGTCATTGGACGCCCAACCAACACTTTTGGATAT
CATTCATCGTGTTTCCAAAGTCCAGATGAACCATTTAGTGGAAGAGGAAC
TTATTGCTGCAGGTGCCAAAAAGCTAAACTCAACAAATCGCCGAAGATTG
TCTCATAAACTTCAAAGCGCAAAAGTAACAGAATACAAATACCCCGATAC
ATTCCTGGAGTTTCTAAACCATCAACGGCAAGCATACAAAGATGGAGTCA
AAATGGGTGTTGAATTGTACAGGGAATATTGCGAGGATGGAATTCAATGG
TTGGAAAACCAATGCGGTCTTGATTTTCTGCATCAGAATGGTACGGATTC
CATTCCTAAAGAAAACTGCTTTGATGGGTCTATTGACAATGTTTATGCAC
TTCGAATGTTGACAGAAATTAGTCCATCGATCCTTCTAACACAGTCTGTT
ATGGATAAGGAGAAGAAGATAAATGAATATTTCAAGGCTGAACGCGAGTC
TGAAGAGTTCGAAAGCTGCGgagaagaaaatattgaaacaaatCCGGAAT
CACCTAAACCTTCAACAACAGCCAACACAGAAGATACCGTCGAATCTGAA
GAACCTCAAAACAATAAGTGGCTCATTTAAAGATATATAAACGGGAAATT
AGGCTACATCCATTTGACGCAGGCCCTGAAAATGCTTGTACCAAGAGAGT
ATGTTTCTCGGGAACGCTCAAGGCGACACATCGCTGCTAATTATCTCCCT
GACCGGAAAGAAATAAAAGAGGATCACAATGTGATTATATTCCGCTATGT
TGTTGCAAAGATCTCGAATGAAACAGTGGTTTGCAAAGTGGCTACATTGA
ATAGTAATGGTAATTCAGTGATGAGTGTATCAAGTGAAGATGAGAATGCA
ACTTGTCGCTTAATCCCCCTTCAAAAATTGCGCCAGTATGTTTACCGATT
GCCAGAAAAGATCTTGGTCAGCAAGTGGTTGAAAGTAACAAATATCTATG
GGGAAGTTGGGCTTGAGCGAAACAAAGACGATTGTCTGGAAGTCATGCCA
AATTTTAAGAAAGTTGTAGATACCACAGTCAAAAGCCATGAAGAATCGAA
GGATTTAGCTTTGGCCAAGAAGATAGCTAAAGACCAATTACCTGATGAGT
TTCAAGAAGTTGAAGACGTATTAGACAGAAGAGTGGATGCCAAATCACAT
GAGTATGTCTACTTGGTAAAATTCAAGGATTCTGATCACCAACCAGTTTG
GCTTGAAAGCTCTTGTTTCGACCGCCCAatcaatttcaataaaaggaaaG
CTTTCGACCGAGAAGAGACCGTTTTTGCTACCACCACGTCTGTTAGCGAC
AGAACAGATTTCTTTGGCAAAAAGGGGAAGAAAAGGAAAGCTATCGATCC
TTCAACAAAGCCAGGAAAtacaaagaagaagaaaaaaatttctcagaaat
cagTCACTACCTTAAAATCGTTTTCGTTTTCTAAAAAGGAAGAGCATCCA
TCTACGAGAAAAAACGAATGGGCAAGTGGCGAGTTGATAAATCGGGCACA
AGATAAAATCTCTGAACGACATCCAGAAATGCNAATCAGTCACTACCTTA
AAATCGTTTTCGTTTTCTAAAAAGGAAGAGCATCCATCTACGAGAAAAAA
CGAATGGGCAAGTGGCGAGTTGATAAATCGGGCACAAGATAAAATCTCTG
AACAACATCCAGAAATGAAAGGCTTTCAAAGTACCTATCTGGCAGAAAGG
AATAAATTTGAACCAGCACCTAAAGACTGCGATAGTCTACAGATCCATCA
TGATGGTACGAATCATTGGGTGTTATCTATGCTGAAGGCAGGCAAAGTTA
TTGTTTATGTATATTTGTACACGAAAGTTTTGCCAGCTTTGGCTAAACAA
CTTTGTCAATGCTATCCAATGGCGATTTTAAACAAGAAACTCGAAATCAC
ATTTCCCGAAGTGTATAAACAAGTTGGCGGTAACGACTGTGGATTTTTTG
CTGTCGCGTACACCATTGACATTGTGAATGGACACAATCCTATCGATGCT
TGTTATGATGTNTAAACAAGTTGGCGGTAACGACTGTGGATTTTTTGCTG
TCGCGTACACCATTGACATTGTGAATGGACACAATCCTATCGAAGCTTGT
TATGATCAGAGCGAAATGAGAAGTCACATGAGCAAATGTTTCACAGATGG
AATGATCAAACCTTTTCCACGCATTTCTGGACCAAACCACAGAAGAAGTA
TCAAACGAGAGGCAGTCAGATACATATCAGTTTCTTGTTTATGTTCACTT
CCTGATGATAAAAAAATGCTTAAGTGCTCAACATGTGACGATTTATTCCA
CAAGTCCTGTGTGAATGAAGATAACATCGACAATTGGCGCTGCTCGCATT
GCTCACTCGCAGATGGTTTATTTTTCTAATATTAGAACCGTTATTTAATG
ttgttttttggtattttttatgaTCGTACTAACAAGTAACGAAGTGAGGA
AGCACACTCTTGTTggaaattttgaacattttataTTTCTATATTGTGAC
Tatcttaggcgagaccaatttgattagttgttttagcgaccctgaaattc
aaaaaatcgaa
Run BLAST on NCBI

protein sequence of TCONS_00036606-protein

>TCONS_00036606-protein ID=TCONS_00036606-protein|Name=TCONS_00036606-protein|organism=Clytia hemisphaerica|type=polypeptide|length=994bp
MKSQGSGCNIGLGRFQGFRQLYDHSITSHHKEAIQFFERSVCQDFSASLK
KKPDQYISNYFKSTGKGRTVACHFFWDHHFVQELKDKRNIRSMQPKTLFK
KKELWKKCAPEHGHAACSKFDKWREKHLQDYNELNYESKQSYRSVFVPGK
SVIILNGKTLEIDGGIKSLDPPCLGTAFNVGPRPFTCINCYTQRVSFKDL
ISKRQNASLPTRESRIGQRGLRTSYATKEEMDEYNISIEKENKELKLQNK
RLSRTLYSKKAWQKILTQSYLDDDIKKMTIDLISLFEQRDKRESIQFALL
KNLLLKMKSGVNHKFTLLIKNVACLYKNHLGTTNYSLLQSLFGLPGKTCA
SDHAKPAKINLGFNNNAIETATERYANRPVVECSDEARTLRYISPLMDQN
GKIELIGQCWDADLNRWNDERKYLDDILSKNSIDQYSALKDYVDGIIKTN
QLAKDTAIHNFTSGSGIASEPIVFLVWPTPNSGYCGPHLLKIWDVIRTKS
FLNEDNSLKINPLNLIGHSTDSAGFQLAAALSLMSPNKEAMKEGVKYLTL
GIGESCYASPYFGPLPSIAFLDYDHGLRLFLRCLKYNTLEMNFFPNPKVT
YSAAITHLKELKLKCDETESSLECPFSNNDLLFARYLDQNCDAAIKVFQP
SVADMLEKNVNGAEGTVLYLRAVIYLFEPFLNPSSDPIYMQTSISTGITV
LRIWRKILQLKKKRLTAAPKAAKEPAKRSFFLTYGCYKTAEILFASATSY
MLTIFLHFKHLGPTALSPFKCGTKATERIISEVQGKTNQFQSLDAQPTLL
DIIHRVSKVQMNHLVEEELIAAGAKKLNSTNRRRLSHKLQSAKVTEYKYP
DTFLEFLNHQRQAYKDGVKMGVELYREYCEDGIQWLENQCGLDFLHQNGT
DSIPKENCFDGSIDNVYALRMLTEISPSILLTQSVMDKEKKINEYFKAER
ESEEFESCGEENIETNPESPKPSTTANTEDTVESEEPQNNKWLI
Run BLAST on NCBI

transcript from alignment at sc0001483:43465..49475

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036606 ID=TCONS_00036606|Name=TCONS_00036606|organism=Clytia hemisphaerica|type=transcript|length=6011bp|location=Sequence derived from alignment at sc0001483:43465..49475 (Clytia hemisphaerica)
ttcgattttttgaatttcagggtcgctaaaacaactaatcaaattggtct cgcctaagatAGTCACAATATAGAAAtataaaatgttcaaaatttccAAC AAGAGTGTGCTTCCTCACTTCGTTACTTGTTAGTACGAtcataaaaaata ccaaaaaacaaCATTAAATAACGGTTCTAATATTAGAAAAATAAACCATC TGCGAGTGAGCAATGCGAGCAGCGCCAATTGTCGATGTTATCTTCATTCA CACAGGACTTGTGGAATAAATCGTCACATGTTGAGCACTTAAGCATTTTT TTATCATCAGGAAGTGAACATAAACAAGAAACTGATATGTATCTGACTGC CTCTCGTTTGATACTTCTTCTGTGGTTTGGTCCAGAAATGCGTGGAAAAG GTTTGATCATTCCATCTGTGAAACATTTGCTCATGTGACTTCTCATTTCG CTCTGATCATAACAAGCTTCGATAGGATTGTGTCCATTCACAATGTCAAT GGTGTACGCGACAGCAAAAAATCCACAGTCGTTACCGCCAACTTGTTTAN ACATCATAACAAGCATCGATAGGATTGTGTCCATTCACAATGTCAATGGT GTACGCGACAGCAAAAAATCCACAGTCGTTACCGCCAACTTGTTTATACA CTTCGGGAAATGTGATTTCGAGTTTCTTGTTTAAAATCGCCATTGGATAG CATTGACAAAGTTGTTTAGCCAAAGCTGGCAAAACTTTCGTGTACAAATA TACATAAACAATAACTTTGCCTGCCTTCAGCATAGATAACACCCAATGAT TCGTACCATCATGATGGATCTGTAGACTATCGCAGTCTTTAGGTGCTGGT TCAAATTTATTCCTTTCTGCCAGATAGGTACTTTGAAAGCCTTTCATTTC TGGATGTTGTTCAGAGATTTTATCTTGTGCCCGATTTATCAACTCGCCAC TTGCCCATTCGTTTTTTCTCGTAGATGGATGCTCTTCCTTTTTAGAAAAC GAAAACGATTTTAAGGTAGTGACTGATTNGCATTTCTGGATGTCGTTCAG AGATTTTATCTTGTGCCCGATTTATCAACTCGCCACTTGCCCATTCGTTT TTTCTCGTAGATGGATGCTCTTCCTTTTTAGAAAACGAAAACGATTTTAA GGTAGTGActgatttctgagaaatttttttcttcttctttgtaTTTCCTG GCTTTGTTGAAGGATCGATAGCTTTCCTTTTCTTCCCCTTTTTGCCAAAG AAATCTGTTCTGTCGCTAACAGACGTGGTGGTAGCAAAAACGGTCTCTTC TCGGTCGAAAGCtttccttttattgaaattgatTGGGCGGTCGAAACAAG AGCTTTCAAGCCAAACTGGTTGGTGATCAGAATCCTTGAATTTTACCAAG TAGACATACTCATGTGATTTGGCATCCACTCTTCTGTCTAATACGTCTTC AACTTCTTGAAACTCATCAGGTAATTGGTCTTTAGCTATCTTCTTGGCCA AAGCTAAATCCTTCGATTCTTCATGGCTTTTGACTGTGGTATCTACAACT TTCTTAAAATTTGGCATGACTTCCAGACAATCGTCTTTGTTTCGCTCAAG CCCAACTTCCCCATAGATATTTGTTACTTTCAACCACTTGCTGACCAAGA TCTTTTCTGGCAATCGGTAAACATACTGGCGCAATTTTTGAAGGGGGATT AAGCGACAAGTTGCATTCTCATCTTCACTTGATACACTCATCACTGAATT ACCATTACTATTCAATGTAGCCACTTTGCAAACCACTGTTTCATTCGAGA TCTTTGCAACAACATAGCGGAATATAATCACATTGTGATCCTCTTTTATT TCTTTCCGGTCAGGGAGATAATTAGCAGCGATGTGTCGCCTTGAGCGTTC CCGAGAAACATACTCTCTTGGTACAAGCATTTTCAGGGCCTGCGTCAAAT GGATGTAGCCTAATTTCCCGTTTATATATCTTTAAATGAGCCACTTATTG TTTTGAGGTTCTTCAGATTCGACGGTATCTTCTGTGTTGGCTGTTGTTGA AGGTTTAGGTGATTCCGGatttgtttcaatattttcttctcCGCAGCTTT CGAACTCTTCAGACTCGCGTTCAGCCTTGAAATATTCATTTATCTTCTTC TCCTTATCCATAACAGACTGTGTTAGAAGGATCGATGGACTAATTTCTGT CAACATTCGAAGTGCATAAACATTGTCAATAGACCCATCAAAGCAGTTTT CTTTAGGAATGGAATCCGTACCATTCTGATGCAGAAAATCAAGACCGCAT TGGTTTTCCAACCATTGAATTCCATCCTCGCAATATTCCCTGTACAATTC AACACCCATTTTGACTCCATCTTTGTATGCTTGCCGTTGATGGTTTAGAA ACTCCAGGAATGTATCGGGGTATTTGTATTCTGTTACTTTTGCGCTTTGA AGTTTATGAGACAATCTTCGGCGATTTGTTGAGTTTAGCTTTTTGGCACC TGCAGCAATAAGTTCCTCTTCCACTAAATGGTTCATCTGGACTTTGGAAA CACGATGAATGATATCCAAAAGTGTTGGTTGGGCGTCCAATGACTGGAAT TGGTTCGTCTTACCCTGGACTTCACTGATGATGCGCTCTGTGGCTTTGGT TCCACATTTGAATGGAGATAACGCAGTCGGGCCAAGATgtttgaaatgta aaaaaatggtCAGCATGTAAGATGTTGCACTCGCAAATAAAATTTCCGCA GTTTTGTAGCAACCATAAGTTAAGAAGAAACTTCTCTTTGCTGGCTCCTT TGCAGCTTTCGGTGCAGCTGTCAATCTTTTCTTCTTAAGCTGAAGTATCT TCCTCCAAATTCGCAGGACAGTTATGCCAGTTGAGATACTTGTTTGCATG TATATTGGATCGGACGATGGGTTTAAAAAGGGCTCGAACAAATAGATGAC GGCACGCAAGTAAAGCACAGTCCCCTCTGCTCCGTTCACATTCTTTTCCA GCATATCAGCGACACTAGGTTGAAATACTTTAATTGCAGCATCACAATTT TGATCTAGGTAACGCGCAAACAACAAATCATTGTTGCTGAACGGGCACTC TAATGAACTTTCCGTTTCGTCGCACTTTAGTTTTAACTCTTTCAGGTGCG TTATGGCAGCACTGTATGTCACTTTGGGGTTCGGGAAAAAGTTCATTTCC AACGTATTGTATTTGAGACATCTCAAAAAGAGGCGCAATCCATGGTCGTA ATCGAGAAATGCTATTGAAGGCAATGGACCGAAGTAGGGTGAAGCATAAC AACTTTCTCCAATGCCCAATGTTAAGTACTTGACGCCTTCCTTCATAGCT TCCTTGTTGGGGGACATCAAGGATAATGCGGCTGCCAATTGAAAGCCAGC GGAGTCGGTCGAGTGACCGATCAAATTCAACGGGTTGATTTTTAAGCTAT TGTCTTcgttcaaaaaagattttgttctAATCACATCCCAGATCTTAAGT AGATGGGGACCACAATAACCAGAGTTAGGGGTTGGCCATACAAGGAACAC AATTGGTTCACTCGCTATTCCAGATCCTGATGTAAAATTGTGGATTGCGG TGTCTTTGGCAAGTTGATTTGTTTTAATAATTCCATCCACATAATCTTTC AAAGCAGAGTACTGATCAATTGAATTCTTTGAAAGGATATCATCTAAATA CTTTCTTTCGTCATTCCATCGGTTCAAATCAGCGTCCCAGCATTGACCTA TCAATTCAATTTTGCCATTTTGGTCCATGAGTGGAGAAATATAACGCAAT GTTCTTGCCTCGTCGGAACATTCCACAACAGGACGATTAGCATACCGCTC AGTAGCAGTTTCAATGGCGTTGTTGTTGAATCCAAGGTTGATCTTCGCAG GTTTCGCATGGTCAGAAGCACATGTTTTTCCTGGCAATCCAAAAAGGCTT TGTAAAAGACTATAATTGGTGGTTCCAAGGTGGTTTTTATAGAGGCACGC AACGTTTTTTATCAGCAAAGTAAACTTGTGATTCACCCCAGATTTCATTT TTAGGAGCAGATTCTTCAGTAAAGCAAACTGTATGGATTCCCGCTTATCG CGTTGTTCAAAGAGTGAGATGAGATCGATAGTCATTTTCTTAATGTCGTC ATCCAGATAGGACTGCGTTAGAATTTTTTGCCACGCCTTTTTGCTATAAA GGGTTCTGGAAAGTCTTTTGTTTTGCAACTTCAGTTCCTTGTTTTCTTTC TCGATGCTGATGTTATACTCGTCCATTTCTTCTTTAGTTGCATAAGAAGT TCGTAAACCTCTTTGGCCGATTCTTGACTCACGTGTTGGCAAGGAAGCAT TTTGTCGCTTGGAAATGAGATCTTTGAAAGAAACTCGTTGTGTATAGCAA TTGATGCATGTAAATGGACGTGGACCAACATTGAAAGCAGTACCCAAACA TGGAGGATCCAAAGATTTAATGCCTCCGTCAATTTCAAGAGTTTTACCAT TTAATATGATGACCGACTTACCAGGTACAAACACAGACCTGTATGATTGC TTTGACTCATAATTGAGTTCATTGTAGTCTTGAAGATGCTTTTCCCGCCA TTTATCAAACTTGGAACAAGCAGCATGGCCATGTTCAGGAGCGCATTTTT TCCacaattcttttttcttgaAGAGAGTTTTGGGCTGCATACTTCGGATG TTTCTTTTATCCTTCAATTCTTGAACAAAATGATGATCCCAGAAAAAATG ACATGCTACTGTTCTTCCTTTTCCAGTCGACTTGAAGTAATTACTGATGT ATTGATCTGGTTTCTTTTTTAAACTTGCTGAAAAGTCCTGACAGACTGAC CTTTCAAAAAATTGAATCGCTTCTTTATGGTGCGATGTAATTGAGTGATC ATAAAGCTGACGAAAACCTTGAAATCTGCCGAGACCGATATTGCATCCAC TACCTTGAGATTTCATATAAAGTCACCATACAAAGGACATATTTCACAAG AAAATTCAAGATGACATTGCGAGTCAGCAAGTGTGAACTGCGGAAGCACA TAGCCAAGTTTGAGAAAATCGAAGAAATTTGAAGATGAGCTGCATACAGG AATCGGTGTAAAAGAACCGCAAAGGAATGCCTTCAGTCTTTTTTCCGTTT CAGATGTAGAAAACTTGGCCCGAGTGAAAATTGTTTCGTATTTTGTCGAC GTTATTTCCATTGGAGGAAAAACTGAATCCAAGAATCTGTCAAATGTTGT GCAATCAGAAGGCATATTAACTGATGTCATGGCCTTGTAATTTTGAAAAT GCCTTGAAAAAACAAGAGCATTAAATTTGTGTGATTCTTTTTTTTTTTGG TCTGAATGAAAATGACTTTTTATGATATACGGGCTCATCAAGTTTATTTC TCATTGTATCTGCTTTTTTATAAAAATCTAAAAGTGATTTCTTTATCTTA TCTTTTCTGGTCTTCAAAGCAACGTTTTCTGGATTGACAGAGTTTGGAGC GATATCAGGACTGTCAGCATTTATGATGAGAACATCAGCACTGTCAGCAT TCGCAGTGAGAGCTTCAGGATAGTTAGCTTTCGCAGTGAGAACGTCAGGA TAGTCAGCATTTGCAGTAAGAACTTCAGCATTGTCAGCATTCGCAGTGAG AACTTCAGGATAGTCAGCATTTGCAGTGAGAACGTCAGGATAGTCAGCAT TTGCATTGAGAACTTCAGCATTGTCAGCATTCGCAGTAAGAACTTCAGCA TTGTCAGCATTCGCAGTAAGAACTTCAGCATTGTCAGATTTCGCAGTGAG AACTGTAGCATTGTCAGCATTCGCAGTGAGAACTTCAGGATAGTCAGCTT TCGCAGTAAGAACTTCAGCATTGTCAGCTTTCGCAATAAGAACTTCAGCA TTGCCAGCTTTCGCAGAGAGAAGAACTGCAGCATTGTCAGCATTCGCAGT AAGAACTTCAGCATTGTCAGCATTCGCAGTGAGAACATCAGCATTGTCAG CTTTCGCAGTA

Coding sequence (CDS) from alignment at sc0001483:43465..49475

>TCONS_00036606 ID=TCONS_00036606|Name=TCONS_00036606|organism=Clytia hemisphaerica|type=CDS|length=2985bp|location=Sequence derived from alignment at sc0001483:43465..49475 (Clytia hemisphaerica)
TTAAATGAGCCACTTATTGTTTTGAGGTTCTTCAGATTCGACGGTATCTT
CTGTGTTGGCTGTTGTTGAAGGTTTAGGTGATTCCGGatttgtttcaata
ttttcttctcCGCAGCTTTCGAACTCTTCAGACTCGCGTTCAGCCTTGAA
ATATTCATTTATCTTCTTCTCCTTATCCATAACAGACTGTGTTAGAAGGA
TCGATGGACTAATTTCTGTCAACATTCGAAGTGCATAAACATTGTCAATA
GACCCATCAAAGCAGTTTTCTTTAGGAATGGAATCCGTACCATTCTGATG
CAGAAAATCAAGACCGCATTGGTTTTCCAACCATTGAATTCCATCCTCGC
AATATTCCCTGTACAATTCAACACCCATTTTGACTCCATCTTTGTATGCT
TGCCGTTGATGGTTTAGAAACTCCAGGAATGTATCGGGGTATTTGTATTC
TGTTACTTTTGCGCTTTGAAGTTTATGAGACAATCTTCGGCGATTTGTTG
AGTTTAGCTTTTTGGCACCTGCAGCAATAAGTTCCTCTTCCACTAAATGG
TTCATCTGGACTTTGGAAACACGATGAATGATATCCAAAAGTGTTGGTTG
GGCGTCCAATGACTGGAATTGGTTCGTCTTACCCTGGACTTCACTGATGA
TGCGCTCTGTGGCTTTGGTTCCACATTTGAATGGAGATAACGCAGTCGGG
CCAAGATgtttgaaatgtaaaaaaatggtCAGCATGTAAGATGTTGCACT
CGCAAATAAAATTTCCGCAGTTTTGTAGCAACCATAAGTTAAGAAGAAAC
TTCTCTTTGCTGGCTCCTTTGCAGCTTTCGGTGCAGCTGTCAATCTTTTC
TTCTTAAGCTGAAGTATCTTCCTCCAAATTCGCAGGACAGTTATGCCAGT
TGAGATACTTGTTTGCATGTATATTGGATCGGACGATGGGTTTAAAAAGG
GCTCGAACAAATAGATGACGGCACGCAAGTAAAGCACAGTCCCCTCTGCT
CCGTTCACATTCTTTTCCAGCATATCAGCGACACTAGGTTGAAATACTTT
AATTGCAGCATCACAATTTTGATCTAGGTAACGCGCAAACAACAAATCAT
TGTTGCTGAACGGGCACTCTAATGAACTTTCCGTTTCGTCGCACTTTAGT
TTTAACTCTTTCAGGTGCGTTATGGCAGCACTGTATGTCACTTTGGGGTT
CGGGAAAAAGTTCATTTCCAACGTATTGTATTTGAGACATCTCAAAAAGA
GGCGCAATCCATGGTCGTAATCGAGAAATGCTATTGAAGGCAATGGACCG
AAGTAGGGTGAAGCATAACAACTTTCTCCAATGCCCAATGTTAAGTACTT
GACGCCTTCCTTCATAGCTTCCTTGTTGGGGGACATCAAGGATAATGCGG
CTGCCAATTGAAAGCCAGCGGAGTCGGTCGAGTGACCGATCAAATTCAAC
GGGTTGATTTTTAAGCTATTGTCTTcgttcaaaaaagattttgttctAAT
CACATCCCAGATCTTAAGTAGATGGGGACCACAATAACCAGAGTTAGGGG
TTGGCCATACAAGGAACACAATTGGTTCACTCGCTATTCCAGATCCTGAT
GTAAAATTGTGGATTGCGGTGTCTTTGGCAAGTTGATTTGTTTTAATAAT
TCCATCCACATAATCTTTCAAAGCAGAGTACTGATCAATTGAATTCTTTG
AAAGGATATCATCTAAATACTTTCTTTCGTCATTCCATCGGTTCAAATCA
GCGTCCCAGCATTGACCTATCAATTCAATTTTGCCATTTTGGTCCATGAG
TGGAGAAATATAACGCAATGTTCTTGCCTCGTCGGAACATTCCACAACAG
GACGATTAGCATACCGCTCAGTAGCAGTTTCAATGGCGTTGTTGTTGAAT
CCAAGGTTGATCTTCGCAGGTTTCGCATGGTCAGAAGCACATGTTTTTCC
TGGCAATCCAAAAAGGCTTTGTAAAAGACTATAATTGGTGGTTCCAAGGT
GGTTTTTATAGAGGCACGCAACGTTTTTTATCAGCAAAGTAAACTTGTGA
TTCACCCCAGATTTCATTTTTAGGAGCAGATTCTTCAGTAAAGCAAACTG
TATGGATTCCCGCTTATCGCGTTGTTCAAAGAGTGAGATGAGATCGATAG
TCATTTTCTTAATGTCGTCATCCAGATAGGACTGCGTTAGAATTTTTTGC
CACGCCTTTTTGCTATAAAGGGTTCTGGAAAGTCTTTTGTTTTGCAACTT
CAGTTCCTTGTTTTCTTTCTCGATGCTGATGTTATACTCGTCCATTTCTT
CTTTAGTTGCATAAGAAGTTCGTAAACCTCTTTGGCCGATTCTTGACTCA
CGTGTTGGCAAGGAAGCATTTTGTCGCTTGGAAATGAGATCTTTGAAAGA
AACTCGTTGTGTATAGCAATTGATGCATGTAAATGGACGTGGACCAACAT
TGAAAGCAGTACCCAAACATGGAGGATCCAAAGATTTAATGCCTCCGTCA
ATTTCAAGAGTTTTACCATTTAATATGATGACCGACTTACCAGGTACAAA
CACAGACCTGTATGATTGCTTTGACTCATAATTGAGTTCATTGTAGTCTT
GAAGATGCTTTTCCCGCCATTTATCAAACTTGGAACAAGCAGCATGGCCA
TGTTCAGGAGCGCATTTTTTCCacaattcttttttcttgaAGAGAGTTTT
GGGCTGCATACTTCGGATGTTTCTTTTATCCTTCAATTCTTGAACAAAAT
GATGATCCCAGAAAAAATGACATGCTACTGTTCTTCCTTTTCCAGTCGAC
TTGAAGTAATTACTGATGTATTGATCTGGTTTCTTTTTTAAACTTGCTGA
AAAGTCCTGACAGACTGACCTTTCAAAAAATTGAATCGCTTCTTTATGGT
GCGATGTAATTGAGTGATCATAAAGCTGACGAAAACCTTGAAATCTGCCG
AGACCGATATTGCATCCACTACCTTGAGATTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021608XLOC_021608Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036606-proteinTCONS_00036606-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036606-exon-sc0001483-1491911889:43465..49475TCONS_00036606-exon-sc0001483-1491911889:43465..49475Clytia hemisphaericaexon
TCONS_00036606-exon-sc0001483-1510915933:43465..49475TCONS_00036606-exon-sc0001483-1510915933:43465..49475Clytia hemisphaericaexon
TCONS_00036606-exon-sc0001483-1575043694:43465..49475TCONS_00036606-exon-sc0001483-1575043694:43465..49475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001483supercontigsc0001483:43465..49475 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0183442 0.0130646 0 0 1.14509 1.48057 1.24169 3.04553 1.28724 1.12769 1.75351 1.46691 1.15423 1.43111 0 0.0111785 0 0.00624811 0 0 0.00591208 0 0 0.00637406 2.53307 5.99528 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036606 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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