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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036595 ID=TCONS_00036595|Name=TCONS_00036595|organism=Clytia hemisphaerica|type=transcript|length=776bp
CTGgattttgctttttgcttttaaaCATATGTAGTAAACGCTgttaaaaa
tttgtattttctgaaaaaaaatcagcgaCACTCTATGATACTTCTAAACC
TAATAGGACTATCAGGCGTCACTCGAGTGTTGAAGATTATTATCAAATAT
TAgattttgctttttgcttttaaaCATATGTAGTAAACGCTGTTAAAAAT
TTGTATTTACATGgttttctgaaaataaaatcaGCAACACTCTATGATAC
TTCTAAACCTGATAGGACTATCAGGCGTCACTCGAGTGTTGAAGATTATT
ATCAAATATTGGATTTTGCTTTTTGCTTTTAAACATATGTAGTAAACGCT
GTTAAAAATTTGTATTTACATAGTTTTCTGAAAAGAAAATCAGCAACACT
CTATGATACTTGTAAACCTGATAGGACTATCAGGCGTCACTCGAGTGTTG
AAGACTAttatcaaaaattggattttgctttttgcttttaaaCATATAAT
TAGTAAATGCTGTTAAAAATTTGTACTTTCAtggttaaaaaaaaatcagC
GACACTCTATGATACTTCTAAACCTGATAGGACTATCAGGCGTCACTCGA
GCGTTGAAGATTAttatcaaaaattggatttagctTTTTTGCTATTTAAA
AAACATATAATTAGTAAAGGCTGTTAAAAATTTGTACTTTcatggtttaa
aaaaaatcagcgACACTCTATGATACTTCTAAACCTGATAGGACTATCAG
GCGTCACTCGAGTGTTGAGGATTGTC Run BLAST on NCBI transcript from alignment at sc0001483:51677..52938+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036595 ID=TCONS_00036595|Name=TCONS_00036595|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at sc0001483:51677..52938+ (Clytia hemisphaerica)
CTGgattttgctttttgcttttaaaCATATGTAGTAAACGCTgttaaaaa
tttgtattttctgaaaaaaaatcagcgaCACTCTATGATACTTCTAAACC
TAATAGGACTATCAGGCGTCACTCGAGTGTTGAAGATTATTATCAAATAT
TAgattttgctttttgcttttaaaCATATGTAGTAAACGCTGTTAAAAAT
TTGTATTTACATGgttttctgaaaataaaatcaGCAACACTCTATGATAC
TTCTAAACCTGATAGGACTATCAGGCGTCACTCGAGTGTTGAAGATTATT
ATCAAATATTGGATTTTGCTTTTTGCTTTTAAACATATGTAGTAAACGCT
GTTAAAAATTTGTATTTACATAGTTTTCTGAAAAGAAAATCAGCAACACT
CTATGATACTTGTAAACCTGATAGGACTATCAGGCGTCACTCGAGTGTTG
AAGACTAttatcaaaaattggattttgctttttgcttttaaaCATATGTA
GTGAACGCTgttaaaaatttgtattttcatggttttctgaaaaaaaatca
ggaaCACTCTATAATACTTCTAAACCTAATGGGAATATCAGGCGTCCCTG
ATAGGACTATCAGGCGTTACTCGAGTGTTGAAGATTATtatcaaaaattg
cattttgctttttgcttttaaaCATATGTAGTAAACGCTGTCAAtggttt
tctgaaaaaaaatcagcgaCACTCTATGATACTTCTAAACCTGATAGGAC
TATCAGGCGTCACTCGAGTGTTGATGATTAttatcaaaaattggattttg
ctttttgcttttaaaCATATGCAGTAAACGCTGTTAAAAATTTGtatctt
tatgattttttgaaaaaaagtcagcgACACTCTATGATACTTCTAAACCT
GATAAGACTATCAGGCGTCACTCGAGTGTTGAAGATTAttatcaaaaatt
ggatttagctTTTTTGCTATTTAAAAAACATATAATTAGTAAATGCTGTT
AAAAATTTGTACTTTCAtggttaaaaaaaaatcagCGACACTCTATGATA
CTTCTAAACCTGATAGGACTATCAGGCGTCACTCGAGCGTTGAAGATTAt
tatcaaaaattggatttagctTTTTTGCTATTTAAAAAACATATAATTAG
TAAAGGCTGTTAAAAATTTGTACTTTcatggtttaaaaaaaatcagcgAC
ACTCTATGATACTTCTAAACCTGATAGGACTATCAGGCGTCACTCGAGTG
TTGAGGATTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036595-exon-sc0001483-1491911889:51677..52169 | TCONS_00036595-exon-sc0001483-1491911889:51677..52169 | Clytia hemisphaerica | exon |
| TCONS_00036595-exon-sc0001483-1510915933:51677..52169 | TCONS_00036595-exon-sc0001483-1510915933:51677..52169 | Clytia hemisphaerica | exon |
| TCONS_00036595-exon-sc0001483-1575043694:51677..52169 | TCONS_00036595-exon-sc0001483-1575043694:51677..52169 | Clytia hemisphaerica | exon |
| TCONS_00036595-exon-sc0001483-1491911889:52656..52938 | TCONS_00036595-exon-sc0001483-1491911889:52656..52938 | Clytia hemisphaerica | exon |
| TCONS_00036595-exon-sc0001483-1510915933:52656..52938 | TCONS_00036595-exon-sc0001483-1510915933:52656..52938 | Clytia hemisphaerica | exon |
| TCONS_00036595-exon-sc0001483-1575043694:52656..52938 | TCONS_00036595-exon-sc0001483-1575043694:52656..52938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001483 | supercontig | sc0001483:51677..52938 + |
Blast
The following BLAST results are available for this feature:
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