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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036592 ID=TCONS_00036592|Name=TCONS_00036592|organism=Clytia hemisphaerica|type=transcript|length=597bp
TTCGAGTCTAGTGCTCGGTGAACCTCCTGGCTCGAATCACCAACGAAATG
AGAAGGTACCGCCGAATCATCAATCAGCCCACCGTTAGTTGTATGGAAGT
ACCCGCTCGAGTCTAGTGCTCGGTGAGCCTCCTGGCTCGAATCACCAACG
GGATGAGAAGGTACCACCGAATCATCACTCAGCCCACCGTTAGTTGTATG
GAAGTACCCGCTCGAGTCTAGTGCTTGGTGAGCCTCCTGGCTCGAATCAC
CAACAGGATGAGAAGGTACCACCGAATCATCTATGGTTCCGGTGCTTGAA
TCATCAGGTGTAGGTCCATGCTGTACAATATGTATGAGTGgtgtcacaaa
aaaattcaagatctGCGCTAGACAACTTGCTCATTTCCCTTGCTTGATTA
ACAGATTCTTGAGCTGTCACAGTGGGTTCAATGACAACCGGGGTCAAAGT
AGTATGACTCTTGTTCGCCTCGATTCTAATATGTGCTCTCCTTTAGCTTT
TGAACACCTTTTTCATGTGACACTGCTAATTGTGCGTACCCTATTAGTGT
ACTATCTTTAACACGCTTTTTATTACTGTACTATTTTATTACTGTAC Run BLAST on NCBI transcript from alignment at sc0001483:40061..40978+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036592 ID=TCONS_00036592|Name=TCONS_00036592|organism=Clytia hemisphaerica|type=transcript|length=918bp|location=Sequence derived from alignment at sc0001483:40061..40978+ (Clytia hemisphaerica)
TTCGAGTCTAGTGCTCGGTGAACCTCCTGGCTCGAATCACCAACGAAATG
AGAAGGTACCGCCGAATCATCAATCAGCCCACCGTTAGTTGTATGGAAGT
ACCCGCTCGAGTCTAGTGCTCGGTGAACCTCCTGGCTCGAATCACCAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATGAGAAGGTACCGCCGAATCATCAATCAGCCCACCG
TTAGTTGTATGGAAGTACCCGCTCGAGTCTAGTGCTCGGTGAGCCTCCTG
GCTCGAATCACCAACGGGATGAGAAGGTACCGCCGAATCATCACTCAGCC
AACCGTTAGTTGTATGGAAGTACCTGCTCGAGTCTAGTGCTTGGTGAACC
TCCTGGCTCGAATCACCAACGGAATGAGAAGGTACCACCGAATCATCACT
CAGCCCACCGTTAGTTGTATGGAAGTACCCGCTCGAGTCTAGTGCTTGGT
GAGCCTCCTGGCTCGAATCACCAACAGGATGAGAAGGTACCACCGAATCA
TCTATGGTTCCGGTGCTTGAATCATCAGGTGTAGGTCCATGCTGTACAAT
ATGTATGAGTGgtgtcacaaaaaaattcaagatctGCGCTAGACAACTTG
CTCATTTCCCTTGCTTGATTAACAGATTCTTGAGCTGTCACAGTGGGTTC
AATGACAACCGGGGTCAAAGTAGTATGACTCTTGTTCGCCTCGATTCTAA
TATGTGCTCTCCTTTAGCTTTTGAACACCTTTTTCATGTGACACTGCTAA
TTGTGCGTACCCTATTAGTGTACTATCTTTAACACGCTTTTTATTACTGT
ACTATTTTATTACTGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036592-exon-sc0001483-1491911889:40061..40115 | TCONS_00036592-exon-sc0001483-1491911889:40061..40115 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1510915933:40061..40115 | TCONS_00036592-exon-sc0001483-1510915933:40061..40115 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1575043694:40061..40115 | TCONS_00036592-exon-sc0001483-1575043694:40061..40115 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1491911889:40332..40436 | TCONS_00036592-exon-sc0001483-1491911889:40332..40436 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1510915933:40332..40436 | TCONS_00036592-exon-sc0001483-1510915933:40332..40436 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1575043694:40332..40436 | TCONS_00036592-exon-sc0001483-1575043694:40332..40436 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1491911889:40542..40978 | TCONS_00036592-exon-sc0001483-1491911889:40542..40978 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1510915933:40542..40978 | TCONS_00036592-exon-sc0001483-1510915933:40542..40978 | Clytia hemisphaerica | exon |
| TCONS_00036592-exon-sc0001483-1575043694:40542..40978 | TCONS_00036592-exon-sc0001483-1575043694:40542..40978 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001483 | supercontig | sc0001483:40061..40978 + |
Blast
The following BLAST results are available for this feature:
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