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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036586 ID=TCONS_00036586|Name=TCONS_00036586|organism=Clytia hemisphaerica|type=transcript|length=1455bp
NNAGAAGGGCGCTAGATACGATCAGTAAAGGTATAGCCGAAGGAACTTTA
GTACATTCCTCCGACCTTAAATGGCTACGTGGGGTCGCGTTTTCTTTGGA
GGCGTTGGCTGCTCAGGAGTgactaataaaataataaaaacaataaaaat
ttcctAATCTTGACACTTCTTCCATCTTGTATTGCTTGGAGGGATTGGAG
ATTGGTCGGGGGGTAGCCTCTCTTCAGGACAGGTCTCTTCTGCATTCCTT
AGGATACTTTCTGGAGTACTTGAATGGTGGCAACGGAAGCAGCAGGTTCC
ACTAACACTGGTGGCTTGATGATAGGGGATGACTGGTTTAGTGGTGTCAT
CCCCAGCTGCCTGTGGTGGTGGTTTAGCAGGCGTTAAAAGTGATTTATTT
GttggttttgatgttatttGGTGTGTCTTCTCAGCCACCAGTCTCTTTGA
ATTTCTCATTTGGTGGTCATATTTAGTAGGTCAGCAGATTCAGGTTTCCC
TTGGTGTTGATGGCTTTTATCTGTGGTTGCCATTTAGGGATGTCAGTTGT
TGGTAGAAGTGTTGGTTGGATTGGTGAAGATGAGTAGCTACCGCAGGGAG
GGGTATAGGTCTTTTGGGTTCTGGTTTTAGGGGTTTTAGGTTTGGTTTCA
GGGAGGCTAGGGTTTGGTTTGTGGCGTTTCTTGTGTTGTCTTCTTCAATC
CCTATGCAAATActataaatatatataaaaaaatcgtaaattcaACCTAG
aaattaaaatacaaatttaataTGGAGTGCAGTCATAATTTGTGCAGTCA
CCAATTTCTCGTTtcctttctctctctctctcctaTAAAAATGAAGTACG
GTGTGCGGTCACGAGTTCGAATTTCTCGTTTCCTTTCTCTCTCTCtcctt
taaaaacgaaagtttAACGAGAAAAAAAGATTAAGAAAGAAAGTTGATCT
TTGTTACAGTGAAAtctgattctaaaaaaaagctgaaaattgaTTGTGAT
TTTGGAGATAAAAGAAAGACAGACAGGCAAGACAGACAAGGTGGAGCGAT
GCCTGAAGGTACAATTAGAATACTTACGGAGTTTGCGTAATTTACCTTGT
ACGTCATTGCTCTTTTATCCTAAAAAATAACTGGAAGATACTGagaaaag
atcaaatttaaaaatctcttcTTTCATTCCTTGAGTCAGATCCCTCGACG
CCCTTCTTAACTGATAATTGAGTGATTAAGTCACGGATTACATTTCCTGC
TTCATCCCTCGTATTATTTGCCGTCGGGGGAGACCTACATATGGTGGAGT
AACTCTTTTTTGCTAAGGTCTCGGCAGCTTCGAGGGACAGATGTCCGCCT
AGTAACTAACATAAATATTGAAAGCATTGAAAATTTATTGTCTCATCACT
TTTTTCGATAATGCAAATAAAGATGACAAATTCTCCTTAAATACATAGAA
AATAG Run BLAST on NCBI transcript from alignment at sc0001482:6162..7616+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036586 ID=TCONS_00036586|Name=TCONS_00036586|organism=Clytia hemisphaerica|type=transcript|length=1455bp|location=Sequence derived from alignment at sc0001482:6162..7616+ (Clytia hemisphaerica)
NNAGAAGGGCGCTAGATACGATCAGTAAAGGTATAGCCGAAGGAACTTTA
GTACATTCCTCCGACCTTAAATGGCTACGTGGGGTCGCGTTTTCTTTGGA
GGCGTTGGCTGCTCAGGAGTgactaataaaataataaaaacaataaaaat
ttcctAATCTTGACACTTCTTCCATCTTGTATTGCTTGGAGGGATTGGAG
ATTGGTCGGGGGGTAGCCTCTCTTCAGGACAGGTCTCTTCTGCATTCCTT
AGGATACTTTCTGGAGTACTTGAATGGTGGCAACGGAAGCAGCAGGTTCC
ACTAACACTGGTGGCTTGATGATAGGGGATGACTGGTTTAGTGGTGTCAT
CCCCAGCTGCCTGTGGTGGTGGTTTAGCAGGCGTTAAAAGTGATTTATTT
GttggttttgatgttatttGGTGTGTCTTCTCAGCCACCAGTCTCTTTGA
ATTTCTCATTTGGTGGTCATATTTAGTAGGTCAGCAGATTCAGGTTTCCC
TTGGTGTTGATGGCTTTTATCTGTGGTTGCCATTTAGGGATGTCAGTTGT
TGGTAGAAGTGTTGGTTGGATTGGTGAAGATGAGTAGCTACCGCAGGGAG
GGGTATAGGTCTTTTGGGTTCTGGTTTTAGGGGTTTTAGGTTTGGTTTCA
GGGAGGCTAGGGTTTGGTTTGTGGCGTTTCTTGTGTTGTCTTCTTCAATC
CCTATGCAAATActataaatatatataaaaaaatcgtaaattcaACCTAG
aaattaaaatacaaatttaataTGGAGTGCAGTCATAATTTGTGCAGTCA
CCAATTTCTCGTTtcctttctctctctctctcctaTAAAAATGAAGTACG
GTGTGCGGTCACGAGTTCGAATTTCTCGTTTCCTTTCTCTCTCTCtcctt
taaaaacgaaagtttAACGAGAAAAAAAGATTAAGAAAGAAAGTTGATCT
TTGTTACAGTGAAAtctgattctaaaaaaaagctgaaaattgaTTGTGAT
TTTGGAGATAAAAGAAAGACAGACAGGCAAGACAGACAAGGTGGAGCGAT
GCCTGAAGGTACAATTAGAATACTTACGGAGTTTGCGTAATTTACCTTGT
ACGTCATTGCTCTTTTATCCTAAAAAATAACTGGAAGATACTGagaaaag
atcaaatttaaaaatctcttcTTTCATTCCTTGAGTCAGATCCCTCGACG
CCCTTCTTAACTGATAATTGAGTGATTAAGTCACGGATTACATTTCCTGC
TTCATCCCTCGTATTATTTGCCGTCGGGGGAGACCTACATATGGTGGAGT
AACTCTTTTTTGCTAAGGTCTCGGCAGCTTCGAGGGACAGATGTCCGCCT
AGTAACTAACATAAATATTGAAAGCATTGAAAATTTATTGTCTCATCACT
TTTTTCGATAATGCAAATAAAGATGACAAATTCTCCTTAAATACATAGAA
AATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036586-exon-sc0001482-1491911889:6162..7616 | TCONS_00036586-exon-sc0001482-1491911889:6162..7616 | Clytia hemisphaerica | exon |
| TCONS_00036586-exon-sc0001482-1510915933:6162..7616 | TCONS_00036586-exon-sc0001482-1510915933:6162..7616 | Clytia hemisphaerica | exon |
| TCONS_00036586-exon-sc0001482-1575043694:6162..7616 | TCONS_00036586-exon-sc0001482-1575043694:6162..7616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001482 | supercontig | sc0001482:6162..7616 + |
Blast
The following BLAST results are available for this feature:
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