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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036525 ID=TCONS_00036525|Name=TCONS_00036525|organism=Clytia hemisphaerica|type=transcript|length=751bp
AGTGTGCAAGGATAAGCATGCGGAATGTGGAGATATATTATCTTATGAAG
GTGTAACATGTGCTATCGATATGATTaaacaaatttgccaaaaaacgtGC
GGATTTTGTTAGTAATGTGGAGATTGCCTCAGCTGTTAAAAAGAGTTATT
GTGGTAATTTAACACTGATCAAAATATTCGAAGAAGCAGtcaaaatttgg
ggaaaattaatttttgtattttggttCTGATATTACATACTAGGAATAAc
ttaatttttgatttattttttttcttcaaattttcaaattttttctaatt
aatctttttaaataaCGTGCTACTAATTTGCAGTTAAAATCAGTGAAtca
ctgtttttttttccttttaaaattttcgattATTTATGATGTAGgaggaa
aattgtccaaaatgaCCAAATGTCCACCCTGTGACCGCAGTGTCGTTCTG
GGAAAAAAAATCTCCTTCAAAAAAGTTCCTTCCCAAACCTCTCCTCTTTG
CCAGAACACCACTGtctgtcagatacacatctgatcttgaaaattagtaa
aatttaagaccctgtcagatatcttcagagcctaaagaAGGGACCCCGAC
CAGAACGCCAcgccccgtacccaattttgcatGCGTGCTCCTTTAAAACC
CGAAGGATCAATTCCATCAATTAAACTTTgcataaaatttgttttgtgTT
CTATTGATTTACTTTAtgattactcttaggtgccaaataaacagaCCCCC
N Run BLAST on NCBI transcript from alignment at sc0001477:31544..32412+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036525 ID=TCONS_00036525|Name=TCONS_00036525|organism=Clytia hemisphaerica|type=transcript|length=869bp|location=Sequence derived from alignment at sc0001477:31544..32412+ (Clytia hemisphaerica)
AGTGTGCAAGGATAAGCATGCGGAATGTGGAGATATATTATCTTATGAAG
GTGTAACATGTGCTATCGATATGATTaaacaaatttgccaaaaaacgtGC
GGATTTTGTTAGTAATNTAGTGTGCAAGGATAAGAATGCGGAATGTGGAG
ATATATTATCTTATGAAGGTGTGACATGTGCTATCGATATGATTaaacaa
atttgccaaaaaacgtGCGGATTTTGTTAGTAATGTGGAGATTGCCTCAG
CTGTTAAAAAGAGTTATTGTGGTAATTTAACACTGATCAAAATATTCGAA
GAAGCAGtcaaaatttggggaaaattaatttttgtattttggttCTGATA
TTACATACTAGGAATAActtaatttttgatttattttttttcttcaaatt
ttcaaattttttctaattaatctttttaaataaCGTGCTACTAATTTGCA
GTTAAAATCAGTGAAtcactgtttttttttccttttaaaattttcgattA
TTTATGATGTAGgaggaaaattgtccaaaatgaCCAAATGTCCACCCTGT
GACCGCAGTGTCGTTCTGGGAAAAAAAATCTCCTTCAAAAAAGTTCCTTC
CCAAACCTCTCCTCTTTGCCAGAACACCACTGtctgtcagatacacatct
gatcttgaaaattagtaaaatttaagaccctgtcagatatcttcagagcc
taaagaAGGGACCCCGACCAGAACGCCAcgccccgtacccaattttgcat
GCGTGCTCCTTTAAAACCCGAAGGATCAATTCCATCAATTAAACTTTgca
taaaatttgttttgtgTTCTATTGATTTACTTTAtgattactcttaggtg
ccaaataaacagaCCCCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036525-exon-sc0001477-1491911889:31544..31600 | TCONS_00036525-exon-sc0001477-1491911889:31544..31600 | Clytia hemisphaerica | exon |
| TCONS_00036525-exon-sc0001477-1510915933:31544..31600 | TCONS_00036525-exon-sc0001477-1510915933:31544..31600 | Clytia hemisphaerica | exon |
| TCONS_00036525-exon-sc0001477-1575043694:31544..31600 | TCONS_00036525-exon-sc0001477-1575043694:31544..31600 | Clytia hemisphaerica | exon |
| TCONS_00036525-exon-sc0001477-1491911889:31719..32412 | TCONS_00036525-exon-sc0001477-1491911889:31719..32412 | Clytia hemisphaerica | exon |
| TCONS_00036525-exon-sc0001477-1510915933:31719..32412 | TCONS_00036525-exon-sc0001477-1510915933:31719..32412 | Clytia hemisphaerica | exon |
| TCONS_00036525-exon-sc0001477-1575043694:31719..32412 | TCONS_00036525-exon-sc0001477-1575043694:31719..32412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001477 | supercontig | sc0001477:31544..32412 + |
Blast
The following BLAST results are available for this feature:
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