|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036523 ID=TCONS_00036523|Name=TCONS_00036523|organism=Clytia hemisphaerica|type=transcript|length=308bp
TTTGGAAGGTGAAATCGAAAGTTCACCCTGCTCCTTAAACTTAGAAGTTC
GATCGAAAGGAAACGCTTTGCTGACAAAAGACGATGAATATAGCAAGGTC
ATAATCCAGGAAATCCAATCAAATGGAGATGGCGAAAATAGACCAGATGA
CTCTCAGTCAACAACAAAAGTCAAATTTCAGCGAAAGGAAGATCGAGAAG
CAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTT
AAGTCGCAGCCACAgatgaatgaaaatgaagaagtcaTGAAAGAACTGTC
CACTACAT Run BLAST on NCBI transcript from alignment at sc0001477:11775..12964+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036523 ID=TCONS_00036523|Name=TCONS_00036523|organism=Clytia hemisphaerica|type=transcript|length=1190bp|location=Sequence derived from alignment at sc0001477:11775..12964+ (Clytia hemisphaerica)
TTTGGAAGGTGAAATCGAAAGTTCACCCTGCTCCTTAAACTTAGAAGTTC
GATCGAAAGGTATAACATACCATTTACGTAACATTCTTTTATAATCGTGT
TCAATTGCAACGGTGTGCAAGTAAAAATGCTCATTTTTTTAATTACCGAA
ACATCTTtgacattttaattttaatcttTCAGGAAACGCTTTGCTGACAA
AAGACGATGAATATAGCAAGGTCATAATCCAGGAAATCCAATCAAATGGA
GATGGCGAAAATAGACCAGATGACTCTCAGTCAACAACAAAAGTCAAATT
TCAGGTTAACGAGGTATTTTTGTTAATGAGTGCACTGTTTACAATTAGCT
TACCATTGAAATTGAATAATGAAGCTATTATCTCTTTGTTGgaaccgttt
ttttttaagaaattcttcagacagattttttttgattttgttttttcaga
CTAGAACACTTTTCGTGTTGGATATTACagcttattttttaaattccGTT
CAAATGATCTGATTCGGAGGTAATTTGCTTCTCTATAACTTGTGAAATAA
ACGTGCTCTCCTTGGCAACACGCCCTCCTCATAAACCCGTTAGCAGGATC
TTTCAGACAGTTGGGGTTAAATAAAGGACCAAAACTCAATTGGGAAGATT
GATATATCCCATGTTTTCGAGCTAGAAAATTCAgtaaaaaatagcacaat
attttgcagtgacaATTTGCTTTTCTGATTATTTTATGGAGGacaaaatt
agagtataattttcgaTTGAGGAcgatattttcatcaatttatcCAATAA
GAAGTCGtcatactgggtctgtgagaagggggtgatTGCCATTGATTCCA
AAGCCCCCGAAATGAATAATTCCGAAACTCCTTGATGggaagtgaagcca
cttatttcaactgcagaaagaaaaacaagcatgaactttttaatttttgt
tataaTCCATAAACAAGCAGTTTTTTTTAGTCTTTTATAtctagattttc
ttttcaattaaaccTTACCTTTATGTTTTaacgagaaatttcaaattact
tCCCATTTATTAGCGAAAGGAAGATCGAGAAGCAAGCGAATCATTTGACC
CAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAgatg
aatgaaaatgaagaagtcaTGAAAGAACTGTCCACTACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036523-exon-sc0001477-1491911889:11775..11833 | TCONS_00036523-exon-sc0001477-1491911889:11775..11833 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1510915933:11775..11833 | TCONS_00036523-exon-sc0001477-1510915933:11775..11833 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1575043694:11775..11833 | TCONS_00036523-exon-sc0001477-1575043694:11775..11833 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1491911889:11957..12078 | TCONS_00036523-exon-sc0001477-1491911889:11957..12078 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1510915933:11957..12078 | TCONS_00036523-exon-sc0001477-1510915933:11957..12078 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1575043694:11957..12078 | TCONS_00036523-exon-sc0001477-1575043694:11957..12078 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1491911889:12838..12964 | TCONS_00036523-exon-sc0001477-1491911889:12838..12964 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1510915933:12838..12964 | TCONS_00036523-exon-sc0001477-1510915933:12838..12964 | Clytia hemisphaerica | exon |
| TCONS_00036523-exon-sc0001477-1575043694:12838..12964 | TCONS_00036523-exon-sc0001477-1575043694:12838..12964 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001477 | supercontig | sc0001477:11775..12964 + |
Blast
The following BLAST results are available for this feature:
|
