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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036509 ID=TCONS_00036509|Name=TCONS_00036509|organism=Clytia hemisphaerica|type=transcript|length=450bp
ggaaTGTATTGAGTTAGTAAGTGATCTAATAtaccgggtggtccaaaaaa
aacttCGGACGTTTGTTGGCTTCTTGAGACCaagttttttttggaccacc
cggtaCTTATTGCTCTTATTAGAAAGAGAAACATTTTATTTCATTCTTTA
CATACAGCTTACCATCGACATCATTGTCAACTAAAACAAATACCTCAATT
ATGCCAAGTTCGAAGAGAAGAAGTGCTAGTTCACGCAAATCGTCATCGAC
AATAACACGTCCAAGTGCATCGCATCACAACAAATTATGTTCATCTCCCG
GTTCAACCTCACCAGATTCGTCACCTACCCGATCTTCATTAAGACCGTCA
GGACCGTCAACTCGGAAATCACCGCGTAATCACAACAAATTATGTTCATC
TCCCGGTTCAACCTCACCAGATTCGTCACCTACCCGATCTTCATTAAGGT Run BLAST on NCBI transcript from alignment at sc0001476:2411..4133- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036509 ID=TCONS_00036509|Name=TCONS_00036509|organism=Clytia hemisphaerica|type=transcript|length=1723bp|location=Sequence derived from alignment at sc0001476:2411..4133- (Clytia hemisphaerica)
GGAATGTATTGAGTTAGTAAGTGATCTAATATACCGGGTGGTCCAAAAAA
AACTTCGGACGTTTGTTGGCTTCTTGAGACCAAGTTTTTTTTGGACCACC
CGGTACTTATTGCTCTTATTAGAAAGAGAAACATTTTATTTCATTCTTTA
CATACAGCTTACCATCGACATCATTGTCAACTAAAACAAATACCTCAATT
ATGCCAAGTTCGAAGAGAAGAAGTGCTAGGTATGTCGTAATATTTTGCAC
ATTAAAGCATCAAGTTTTGTTTAGAACTCTCTTTAAGGTTTAAATCTTTT
CAAGTCATTCATTATTTAGTTTCATCATATTTTGAACACGTGAATGAAAT
TATAATGCACTGCAGAACATTTTGGCAAACCGGTAGGAAAATGGTAGGCT
ATAGGGAAAAACTGATAGTTTAGGAGTCACTCCTTCTTTCATATACAGTT
CACGCAAATCGTCATCGACAATAACACGTCCAAGTGCATCGCATCACAAC
AAATTATGTTCATCTCCCGGTTCAACCTCACCAGATTCGTCACCTACCCG
ATCTTCATTAAGGTTAGTATTCACATCATGAACTCGCTTGGAAATGATTC
CCTCATTCAAAAGATTGATTAGAAATAGTTGGTAACGGTTAGAATTACAC
TGAAAAAAACCGACATATCACCTCAGCCGATTTGGGAAGATTTTCGACGA
ACCCAAAAAGCCTTTCATGCCTCTCATTGGGAACTGCGCAAATCCGGAAA
GACTCTGCTCAGTTTTTGAGGTCAGGCACAAACCTATGGCAGGTGTCCCA
AGGCCCACGGAGGATTTAGAGACTTTTTTATTTTGTCGAAAATCATCCGA
ATTTCACATGTGTTCAAGAAACAAAATTAGGATTGACATAAAAATCTAAT
TTCCTGAAAGAAGACAATTATGAACGTCAAATAAAGACTCATGCCAATGA
ATTTGACATAAATAAAAACCTTTATAATTTACTCTTAACTTGTATTTTCC
ACGAGCTTCCTGTGAGCCCCACCCCCCAAGGTCCTTGGAGCTGCAATGTT
TCTGGAGATCGATCGAAAGTTTTTACATAGAGTTTTATATATGGGCATGT
TTAGGATGGTGTTTTGGACTTTCCAGGGCTTCGAAATTGGGCCAAGTCTA
TTTCCTTCCCAGAATAGCCTCTTTCATCTTTGGTATTGCCTATCATAGGA
ACTGCGTAAATTCGGAAAGACTCTGCTCTTTTGTCGAGGTCAGGCACGAA
CCTCTGGCAGGTGTCCTAAGGCTCACGGAGGATTGGGAGGCTATTTAATG
TCGTCGCAAATTGTCCGAATTTCATTTGATGTGTTTCTAGAAACAAAAAT
AGAGTTGGCCTAAAAATCTAATTTCCTGAAATAAGACAATTATGAACGTC
AAATAAAGACTCATTTCAATGAATTTGAAGTTAATAGACGCCCTTGATTA
GTTACACTTATTTTCACCAACTGCCAGCGAGCCCCCAAGGACCTTTAAAC
GTCAATTAAGAACCAGAATTAGACTTTAAGGATTGTCTATACTGTGATTA
AGCCCAGATATTGGTTAATGGGGGATTTCGACAGAACATTGTTTCACGGT
TTCTTTTCTTTTGCAGACCGTCAGGACCGTCAACTCGGAAATCACCGCGT
AATCACAACAAATTATGTTCATCTCCCGGTTCAACCTCACCAGATTCGTC
ACCTACCCGATCTTCATTAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036509-exon-sc0001476-1575043694:3905..4133 | TCONS_00036509-exon-sc0001476-1575043694:3905..4133 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1575043694:3572..3685 | TCONS_00036509-exon-sc0001476-1575043694:3572..3685 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1575043694:2411..2517 | TCONS_00036509-exon-sc0001476-1575043694:2411..2517 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1510915933:3905..4133 | TCONS_00036509-exon-sc0001476-1510915933:3905..4133 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1510915933:3572..3685 | TCONS_00036509-exon-sc0001476-1510915933:3572..3685 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1510915933:2411..2517 | TCONS_00036509-exon-sc0001476-1510915933:2411..2517 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1491911889:3905..4133 | TCONS_00036509-exon-sc0001476-1491911889:3905..4133 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1491911889:3572..3685 | TCONS_00036509-exon-sc0001476-1491911889:3572..3685 | Clytia hemisphaerica | exon |
| TCONS_00036509-exon-sc0001476-1491911889:2411..2517 | TCONS_00036509-exon-sc0001476-1491911889:2411..2517 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001476 | supercontig | sc0001476:2411..4133 - |
Blast
The following BLAST results are available for this feature:
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