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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036507 ID=TCONS_00036507|Name=TCONS_00036507|organism=Clytia hemisphaerica|type=transcript|length=772bp
GAGAAAGAAACAGGTAAATGGTCAGAGCCGATGGATTTTAAGGAAGTAAT
GTCATTAATTTGGAAGAATCTGTCTGGAGAAGTAATTATTTGTTGGATAA
CTTCTTTAAATTCACCTTTCTTGGTTTTGTAGTTTGGTGGCATCATGTAT
GTCTCGAAATCATTATTATCGAATAGCTCTCTAAAGTTTGTACCTCTAGA
GTTTGTTTTAAGGCTGCCCCAAGAGTGGTGTTTGGAATTTAGGTCTCCAA
CGATTATTGAATTAGGAAGGAAGAGAAGTTTTAAGGTTTCTGGATTAGCA
GTGAAAGTAGGTGGAAAGTAACAACAgcaaagattgaaaaatttttgcaT
GTTTTGAGAGTCTGGGAAGATTTTAATTAGTAGTATTTCATGCTTCCCTA
TTTGGAATTTCCTTATGTGGTCATGAGCTATGTCTTCTCTTAGTAAAATT
GCTGTACCCCCTCCATAGGATCTTAAGGTCCTCATTATAGACGTGTATCC
TTTAATGTTGATGTTTTCCTTCTTTATTAATTTTGTCTCATTAAGACAGA
CAATGTCAGGTGTTTCCTCGGTTAAAAGAGTTTTCAGATCTTGTTTTTTA
GATTTATATCCATTGAGGTttaattgaattatttttagaGTCATCATTAT
GGCAGAGAAGAAATAGTCGGGGATTCTTGTAGTAATAGAGAGGTTGTTTC
TAGTTCTTCTATTGATTGCATGAAAGTTTCTTTATTGAAGTTGCTGTTAT
GTCTTTTTAGGATGGATTGAAG Run BLAST on NCBI protein sequence of TCONS_00036507-protein >TCONS_00036507-protein ID=TCONS_00036507-protein|Name=TCONS_00036507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
MMTLKIIQLNLNGYKSKKQDLKTLLTEETPDIVCLNETKLIKKENINIKG
YTSIMRTLRSYGGGTAILLREDIAHDHIRKFQIGKHEILLIKIFPDSQNM
QKFFNLCCCYFPPTFTANPETLKLLFLPNSIIVGDLNSKHHSWGSLKTNS
RGTNFRELFDNNDFETYMMPPNYKTKKGEFKEVIQQIITSPDRFFQINDI
TSLKSIGSDHLPVSF Run BLAST on NCBI transcript from alignment at sc0001475:53793..54564 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036507 ID=TCONS_00036507|Name=TCONS_00036507|organism=Clytia hemisphaerica|type=transcript|length=772bp|location=Sequence derived from alignment at sc0001475:53793..54564 (Clytia hemisphaerica)
CTTCAATCCATCCTAAAAAGACATAACAGCAACTTCAATAAAGAAACTTT
CATGCAATCAATAGAAGAACTAGAAACAACCTCTCTATTACTACAAGAAT
CCCCGACTATTTCTTCTCTGCCATAATGATGACtctaaaaataattcaat
taaACCTCAATGGATATAAATCTAAAAAACAAGATCTGAAAACTCTTTTA
ACCGAGGAAACACCTGACATTGTCTGTCTTAATGAGACAAAATTAATAAA
GAAGGAAAACATCAACATTAAAGGATACACGTCTATAATGAGGACCTTAA
GATCCTATGGAGGGGGTACAGCAATTTTACTAAGAGAAGACATAGCTCAT
GACCACATAAGGAAATTCCAAATAGGGAAGCATGAAATACTACTAATTAA
AATCTTCCCAGACTCTCAAAACAtgcaaaaatttttcaatctttgcTGTT
GTTACTTTCCACCTACTTTCACTGCTAATCCAGAAACCTTAAAACTTCTC
TTCCTTCCTAATTCAATAATCGTTGGAGACCTAAATTCCAAACACCACTC
TTGGGGCAGCCTTAAAACAAACTCTAGAGGTACAAACTTTAGAGAGCTAT
TCGATAATAATGATTTCGAGACATACATGATGCCACCAAACTACAAAACC
AAGAAAGGTGAATTTAAAGAAGTTATCCAACAAATAATTACTTCTCCAGA
CAGATTCTTCCAAATTAATGACATTACTTCCTTAAAATCCATCGGCTCTG
ACCATTTACCTGTTTCTTTCTC Coding sequence (CDS) from alignment at sc0001475:53793..54564 >TCONS_00036507 ID=TCONS_00036507|Name=TCONS_00036507|organism=Clytia hemisphaerica|type=CDS|length=645bp|location=Sequence derived from alignment at sc0001475:53793..54564 (Clytia hemisphaerica)
ATGATGACtctaaaaataattcaattaaACCTCAATGGATATAAATCTAA
AAAACAAGATCTGAAAACTCTTTTAACCGAGGAAACACCTGACATTGTCT
GTCTTAATGAGACAAAATTAATAAAGAAGGAAAACATCAACATTAAAGGA
TACACGTCTATAATGAGGACCTTAAGATCCTATGGAGGGGGTACAGCAAT
TTTACTAAGAGAAGACATAGCTCATGACCACATAAGGAAATTCCAAATAG
GGAAGCATGAAATACTACTAATTAAAATCTTCCCAGACTCTCAAAACAtg
caaaaatttttcaatctttgcTGTTGTTACTTTCCACCTACTTTCACTGC
TAATCCAGAAACCTTAAAACTTCTCTTCCTTCCTAATTCAATAATCGTTG
GAGACCTAAATTCCAAACACCACTCTTGGGGCAGCCTTAAAACAAACTCT
AGAGGTACAAACTTTAGAGAGCTATTCGATAATAATGATTTCGAGACATA
CATGATGCCACCAAACTACAAAACCAAGAAAGGTGAATTTAAAGAAGTTA
TCCAACAAATAATTACTTCTCCAGACAGATTCTTCCAAATTAATGACATT
ACTTCCTTAAAATCCATCGGCTCTGACCATTTACCTGTTTCTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036507-exon-sc0001475-1491911889:53793..54564 | TCONS_00036507-exon-sc0001475-1491911889:53793..54564 | Clytia hemisphaerica | exon |
| TCONS_00036507-exon-sc0001475-1510915933:53793..54564 | TCONS_00036507-exon-sc0001475-1510915933:53793..54564 | Clytia hemisphaerica | exon |
| TCONS_00036507-exon-sc0001475-1575043694:53793..54564 | TCONS_00036507-exon-sc0001475-1575043694:53793..54564 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001475 | supercontig | sc0001475:53793..54564 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005135 | Endo/exonuclease/phosphatase |
Blast
The following BLAST results are available for this feature:
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