TCONS_00036484 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036484
Unique NameTCONS_00036484
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036484 ID=TCONS_00036484|Name=TCONS_00036484|organism=Clytia hemisphaerica|type=transcript|length=3150bp
CAACTAACAACGGAGAAAAAAGACAACAGATTCAAGATTGGAAAATTCGA
CAGAAACTTTTGTATCAACTATCTGGATGGCTACTATTCGCATCCAAATG
AATGTGATCTGTATTATAGATGCGTCACTTCTGTCGCACATTTCGGACAG
TGTCCAGAAGATACATTTTTCCATGAAGCTATCAATGGTTGTGTGCGTAG
GGAAAATGCAAAATGCAcaaaaacaagTGAGCCTGACGCCACAACACAGC
AACCCACAACACCAGAGGCTTCTTCACCTGAAGATACAACAGctgaaact
actgttcctacaACACTTTCTACGGAAGATACAACTGAGACGACGCAACC
GAAAACTGAAGACAACACACAGTCAACAGAGGAAGAAGTGACTAAACTGG
CTACCTCCCCACAAACAACAGAATCAATTACCTTAGAATCTTCCACACAA
GAACCGAGTCAAGCAACCATACAGGCTACAGAGCCTACAACGGAAGCGAC
AACTCAAACCACACTTGAACCTGTTTCCACGAAAGGCGGTGAAACGACTC
AGTCTTCAACCCAAACATCATCAACTTCTGAATCAGTAACAAGCAATCCC
ACAACACTTGCAGAGACAACAGAAACTacacaacaaacaacaaagcCTGC
TTCAACTGTCTCTGAAACGACTACTCATCAAGCCACCCAAAGTACAACAG
AGCAAGTAGTCCAGTCCACCACAGAAACTGAAGCTACTAAACCTGCTACC
CAGCCGGATACCACAGCAGAACAGACACAACCCACAACAGTCGCCGCAAC
AGAGCGAACCAAAGAAAGAAAGACGATCGATGAGGACTTTTGCCGAACAA
ACCAGCTAACAACCGGGTGGCATGCAATTGAATTTGATTGCACCAAGTAT
TACCAATGTGTTCAAGGAAGAACTTTCGTGAGGATGTGCGCTAAAAATAC
ATTCTTTcatccaaagtttttttgtgtttcCAAAGAACGGGCTATGTGTA
cAAAAATCCCGGAGTCAGAAAATAGCGCCACAACAGAGACAGTGAAAACA
CCAGAAAGCACAACACAATCAACAGAAGGCACAATACAAGCAACAGAAAG
CACGACACAATCAACAGAAAGTACGACACAATCAACAGGGAGCACGACAC
AAGCAACAGAGAGCACGACACAAGCAACAGAAAGCACGACACAATCAACA
GAAAGCACGACACAGGCAACAGAAAGTACGACACAGGCAACAGAAAGCAC
GACACAGGCAACAGAAAGCACGACACAATCAACAGAAGGTACGACACAAT
CAACAGAAAGCACAACACAAGCAACAGAAAGCACAACACAATCAACAGAA
GGTGCGACACAATCAACAGAAAGCACAACACAAGCAACAGAAAGCACGAC
ACAATCAACAGAAGGTACGACACAATCAACAGAAAGCACAACACAAGCAG
CAGAAAGCACAACACAAGCAACAGAAGGCACAACACAAGTAACAGAAAGC
ACGACACAAGCAACAGAAAGTACGACACAAGCAACAGAAAGTACGACACA
AGCAACAGAAAGTACGACACAAGCAACAGAAAGTACAACACAAGCAACAG
AAAGTACAACACAAGCAACAGAAGGCACAACACAATCAACAGAAGGCACA
ACACAATCAACAGAAAGTACGACACAAGCAACAGAAAGTACGACACAATC
AACAGAGAGCACGACACAAGAGGTTCAAACAACGAAACAAGCTATTACCA
TTGGAGAGACCATCATCGATAAAGATTTCTGCTTGAACCACGAGGATGGA
TTCCATCCGAATCCATCAGATTGTCGAGAATTATATCAATGTTTGCGTAA
GAGGACTTTCCCACGAAGTTGTAGCAGTGGTTTGTTATATGATTCCATTG
CAGTTCGCTGTAAAGATGCTGACTTGGTTAACTGTGAACTGAACAGAAAT
GGTGTTATCCCTAAAACCACCCAAGCGCCACCGCCCGCTGAAGCAACAGA
AGCGCCCAAGACAAAGAACACACCTGAGCCAACTCACAATGAATTCTTTT
GTGAGGACAATAACCTCGATCCTGGATTCTATCCTGATCCCAAGGACTGC
AAATCCTTCTACCGATGTTTCAAACAAGCAGGGCAGCTCAAAACAAAGTT
TACAGTTTGTACTGGCACCTTGTTGTATGATTCTGTTAACATACGATGTG
AATGGCCCAACGTAGTTGATTGCAACTTGAACAAAGGGTTGACGACAACT
CCGGTACCGTTGCCTGCTTACGCCGGACAATATCCGATTGCAACCGCCTG
TAATAAGGCTACATGTACATTAAAAAACAAATGCAAATGTGCCGGAACCG
ACGCACCGCATCCAAAACTTACGGCAACGACATCTCCCAAGATTGTCATT
TTCTCGATGGATGATTCGTTGGGATCTTCACAATATAACGTCATCAGTGA
AATTCTGGATGGGCGAGTCAATCCTAACGGTTGCCCAGTAACAGGAACTA
TGTTTGTCTCGATGGATTCGGTGCAAAGTCTTCGTTACCCAAAACTCATG
TATGACAAAGGACATGAGATAGCAGTTCACACCAAATCGCATCGCTTTCC
AACTACCTACTGGAAGACAGTTTCATACAAAGCTCTCGTTGACGAAATCG
TCGATCTCAGGGACCAAATGTTCAAAGCAGGAATAAAAAATGTTGTAGGG
TATCGAAACCCTTTCTTGCAGACCTCAGGAGATACTTTGTTTACCTTGCT
GAAAGATTTTAACTTCCGATACGATTCATCGCTTCCAACTCCTGCGCATG
CGTACTGGTGGCCTTATACAATGGAACACAAAGTTGATTATTGCGCAATC
CCACCATGTCCGACAAAATCCTACAAAGGCTTTTATGAAGTGCCTTTGGA
AATCGTCAAGAATCGAAAGGGAGGTCTTTGCTCCATGTTCGATGAGCCTG
GATGTTGGCGAAATAGCCTGCAAACTGCAGATGAAACTTATGACTATTTC
AAAGAGAATTTTGAACGACATTTCACGCATGGCTCGTCCCCATTCCCTAT
TCATGGACATGCTAATAACTTATTGGGTGGAAGTCACGGCCCACGGAAAG
AAGGTTTAATCCGTTTCTTGGATGAGTTGATGCGTAGGGAGGATGTCTAC
Run BLAST on NCBI

transcript from alignment at sc0001472:22324..34412+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036484 ID=TCONS_00036484|Name=TCONS_00036484|organism=Clytia hemisphaerica|type=transcript|length=12089bp|location=Sequence derived from alignment at sc0001472:22324..34412+ (Clytia hemisphaerica)
CAACTAACAACGGAGAAAAAAGACAACAGATTCAAGATTGGAAAATTCGA
CAGAAACTTTTGTATCAACTATCTGGATGGCTACTATTCGCATCCAAATG
AATGTGATCTGTATTATAGATGCGTCACTTCTGTCGCACATTTCGGACAG
TGTCCAGAAGATACATTTTTCCATGAAGCTATCAATGGTTGTGTGCGTAG
GGAAAATGCAAAATGCAGTAAGTGCAAGTTATTCGTTTTTAGTTTAGTCT
TCATCGTTAATGCCATCTTGCATTTAATCTAACCTAAGTTAACTGTCGCC
AGTAGAGAGAGTTTTATAACCAACGATTTTTGAATCATGTCCTTAGGAGT
TTTGATTTTAAGTCAACCTGTCCAATTGCTGAATATTATACAACCAATAT
TATACACTCAAAGTGATCAAAATCGTGttttatttcaagcaaaaacaagT
GAGCCTGACGCCACAACACAGCAACCCACAACACCAGAGGCTTCTTCACC
TGAAGATACAACAGctgaaactactgttcctacaACACTTTCTACGGAAG
ATACAACTGAGACGACGCAACCGAAAACTGAAGACAACACACAGTCAACA
GAGGAAGAAGTGACTAAACTGGCTACCTCCCCACAAACAACAGAATCAAT
TACCTTAGAATCTTCCACACAAGAACCGAGTCAAGCAACCATACAGGCTA
CAGAGCCTACAACGGAAGCGACAACTCAAACCACACTTGAACCTGTTTCC
ACGAAAGGCGGTGAAACGACTCAGTCTTCAACCCAAACATCATCAACTTC
TGAATCAGTAACAAGCAATCCCACAACACTTGCAGAGACAACAGAAACTa
cacaacaaacaacaaagcCTGCTTCAACTGTCTCTGAAACGACTACTCAT
CAAGCCACCCAAAGTACAACAGAGCAAGTAGTCCAGTCCACCACAGAAAC
TGAAGCTACTAAACCTGCTACCCAGCCGGATACCACAGCAGAACAGACAC
AACCCACAACAGTCGCCGCAACAGAGCGAACCAAAGAAAGAAAGACGATC
GATGAGGACTTTTGCCGAACAAACCAGCTAACAACCGGGTGGCATGCAAT
TGAATTTGATTGCACCAAGTATTACCAATGTGTTCAAGGAAGAACTTTCG
TGAGGATGTGCGCTAAAAATACATTCTTTcatccaaagtttttttgtgtt
tcCAAAGAACGGGCTATGTGTAGTAAGTAAAATCTTTAATAGAAGTGTTT
TGGTTCATATTGATATATCTGCGCCCTTTCAGTACCAAAGCTTTGCATTT
CTTTTGACAGCGTCGTCGTgcattaccttaagggaagaaattttggtggg
aattcaatttggtggatttggcggatttggtcaaaatccgccaatttaaa
ttcccgccaatttaaattcccgccaaatttatttttttccgtCATCAGCC
AAATTAATTCCCATCAAATTTAAATTGCTCTATTGATTCCCCAAATGTGT
ACCATatcaggccttaaaacaggttgttccttttttaatggcgttttttT
AATAtccttcatccgccaaattaaattccttccaaatttaatttttcgac
catccaccaaattaaattcccaccaaaatttcttcctttaaggtagtatG
ACATTAATcagttttatgtttttttccaCTAGCTcagaaaatttctttgt
ttttagagtTCATTGTGCTCGCCAGAAATGGGATTAAAAAGGTCAATTCA
AAATACTGCTTTCGATTCTTTGTGGCAGCTAAGGTTAGAAGTCTTAAAAA
ACTTTATTATCTCCTGTCAGATAAcactatttttctttgaagcAAAAATC
CCGGAGTCAGAAAATAGCGCCACAACAGAGACAGTGAAAACACCAGAAAG
CACAACACAATCAACAGAAGGCACAATACAAGCAACAGAAAGCACGACAC
AATCAACAGAAAGTACGACACAATCAACAGGGAGCACGACACAAGCAACA
GAGAGCACGACACAAGCAACAGAAAGCACGACACAATCAACAGAAAGCAC
GACACAGGCAACAGAAAGTACGACACAGGCAACAGAAAGCACGACACAGG
CAACAGAAAGCACGACACAATCAACAGAAGGTACGACACAATCAACAGAA
AGCACAACACAAGCAACAGAAAGCACAACACAATCAACAGAAGGTGCGAC
ACAATCAACAGAAAGCACAACACAAGCAACAGAAAGCACGACACAATCAA
CAGAAGGTACGACACAATCAACAGAAAGCACAACACAAGCAGCAGAAAGC
ACAACACAAGCAACAGAAGGCACAACACAAGTAACAGAAAGCACGACACA
AGCAACAGAAAGTACGACACAAGCAACAGAAAGTACGACACAAGCAACAG
AAAGTACGACACAAGCAACAGAAAGTACAACACAAGCAACAGAAAGTACA
ACACAAGCAACAGAAGGCACAACACAATCAACAGAAGGCACAACACAATC
AACAGAAAGTACGACACAAGCAACAGAAAGTACGACACAATCAACAGAGA
GCACGACACAAGAGGTTCAAACAACGAAACAAGCTATTACCATTGGAGAG
ACCATCATCGATAAAGGTATGAAATAGCTGGAAATGATTGAGGGAAAGTT
ATTATATAGGTGGGATAATACTAAGGCATACTCTATTGTTTAAGATCTTC
TGCCAGACCGTTTTTGACAATTTATTCTCAAAAGTTGATATTGGGTAGTT
ATTGCATTGGGTTGTTATCAAAATTACTGACAAACGATATATGCTAAGTT
ATCAAAATCTATATAGACtcaatgaaaatcttttttgcacATTTCAGATT
TCTGCTTGAACCACGAGGATGGATTCCATCCGAATCCATCAGATTGTCGA
GAATTATATCAATGTTTGCGTAAGAGGACTTTCCCACGAAGTTGTAGCAG
TGGTTTGTTATATGATTCCATTGCAGTTCGCTGTAAAGATGCTGACTTGG
TTAACTGTGGTAGGTTTATTCTGTAAACCTTGTGACATATACNGAAAGTT
ATTATATAGGTGGGATAATAGTAAGGCATACTCTATTGTTTAAGATCTTC
TGCCAGACTGTTTTTGACAATTTATTCTCAAAAGTTGATATTGGGTAGTT
ATTGCATTGGGTTGATATCAAAATTACTGACAAACGGTATATGCTATGTT
ATCAAAATCTATATCATGATTATCAAAGGATTTTCATCAAGActcaatga
aattttttttgcacatTTCAGATTTCTGCTTGAACCACGAGGATGGATTC
CATCCGAATCCATCAGATTGTCGAGAATTATATCAATGTTTGCGTAAGAG
GACTTTCCCACGAAGTTGTAGCAGTGGTTTGTTATATGATTCCATTGCAG
TTCGCTGTAAAGATGCTGACTTGGTTAACTGTGGTAGGTTTATTCTGTAA
ACCTTGTAACATATACGATTTTAAAATCTCGTTTACAGGGATAGATTATt
aacttttggtcatttttcttGCACACTTCAACactaaaaacacccccttc
tcacagacccggtaagattttttcagccagtggggggtAAAGATAACGGA
CGGAAACTCAATGGGGactgatattcccatatttttatggctgaggattt
taattcttttgtttttaagtccgaaaattcagtggggatggaaaaaatag
tataatatttattcgattattttcagtggagacaaaaattggaggattat
tttccaccggggacgatattttggccaatttttccagtgggtctgtgaga
agagggtgtctAAAAATGTTTGTGAGGAGCCTTTGATTAACCATAGTAAT
CTTTCCACACTAAGTAGGCTTTATTATATGGTGTATAAATTTTGAAGCTA
TTATATCctaattaaaacatttttaaatcaCCCGTCTTAGCTTGTTCTAG
ACTAAGAGTAATTTCTACTTCCTTTTTCCTCTGTTCTAGAACTGAACAGA
AATGGTGTTATCCCTAAAACCACCCAAGCGCCACCGCCCGCTGAAGCAAC
AGAAGCGCCCAAGACAAAGAACACACCTGAGCCAACTCACAATGAATGTA
CGTAAATATGTTctattatttataagaatatgtGTATAATCTGGCTGAAA
ACTAAGAACATTCTGactaaaatatttcgaaatgtAACAGACAACAAAAC
AAATTATAGAAATAATTAAAGACAAACGATCAAAACAAACTATCTTTCAA
AAACATCCGAATGGAAGAAAAGAGGatattatgtaaaaacaaaacaaacg
tTTCAGATCTTTTCTGCATAGGAAAGAGATTAGAAATAATGACCTTTTGC
ATCAAAATAAATCTTTCACTTTCGTCCGAGAGTATTTAAAAGAAATCCTC
TTTGAAACTTGCAGGAAAGAGATAATACACTCGTCATGACGAACAAAGGG
GAAATCAAAACTTTAATCCCAGAATCCCTTTGTCTAATTAACACTTACCG
TAGATTACCAAACTTTAGCGACGCCCAGGGAGTTGTCACAACGAGCTTTC
AATTTTCCGTTAAACTTCATTGAAGACTATTAACGATTGCACTTCTAAAA
CTTAAACCACAACATCTCATTTTgtaaaaagatgaaattttcaaaaatgt
tagcTCTTTGACTAGTTACTCGGGTATATACATTGTGTTCACGCTAATtc
aaacttctattattcgaactcATTCTCAGTTCCCCTCATGGGTAAACCCT
CATAAaacactctctctaattcgaaacttCTCTGTATTTAAACAAATCAG
ATTTCCCGCTTCGAGCACGAATAAGTGAGAGTTAACTGTATcacagctgg
cacacaacgtttttcaacgttcatccaacgttatatggacgttatgaaca
ttagataaacattgaaataacgttgtgtgccagctgggatgtgtgccagc
tgggattggACGGTTCCAGTTATAGTCTGTTACCCCCTGTGGCACCTCTC
CCCTGTGGACGAAATGGATTCTCCGTAACAATTAACTGATGAAAAATGTC
AGAATTTCCGAAACATTCAAGATTTTCTCTGATGCGGATGACTAATAAAT
AATTAGGAAAATCCTGTATTTTTAGGAAccttttttaagatttctcaGGA
TTCCtaagtgaagaaaaaatttcaaaaaacccagtcgtccacagggggta
atggtttttttctggaacaaACAAACACCCTTTTTTCTCATTTAGTCTTT
TGTGAGGACAATAACCTCGATCCTGGATTCTATCCTGATCCCAAGGACTG
CAAATCCTTCTACCGATGTTTCAAACAAGCAGGGCAGCTCAAAACAAAGT
TTACAGTTTGTACTGGCACCTTGTTGTATGATTCTGTTAACATACGATGT
GAATGGCCCAACGTAGTTGATTGCAGTAAGTATGATaacttatcggggaa
aaaaatgtcggagttttatttagttggGATATTCGTCACCTAGaagcatt
ttcgtcactttcccccgacattttttcccccgataaggtagtttcGAAAA
ATGATAGTCAAAGCCTCAACTTGAACTTGTCttgattaaattttaaaagG
TTGTAGCTTTTTAAAAGTCCCAATGGCAGCTTAGCAGTATTTAACGAATA
AAATTCCGTATTTCTTCAACTAGACTTCTGTCATTATGCAAGCgattagg
cttctgctcatcctctagcgaaaagagtttTTAGTATAGTATATCCATAG
AGGTCAAGTTATcgcctctacagattcgaacatttgcttccataatggct
gAAATGACGTAACTTAATAAAACATGAAAGACATTTATACTGCTTTTTGT
TGCATTTCAAAGGAACCGGGTACTTCCCAATAatatagcgagtttatgta
tttccACTTTTGaagacggtaaagtgactgaagcgatttggaataacccg
cagttttgacccgcaatatcgaggacggtaaaagtgctgattcaccgtcg
tcctcagttgttcaggatctagtcaaattagaaccttaccgtttccgtcg
cagaaaaacacacatacataaactcggtattataACAGCAGGGGTCCAGT
TTTTGGAGGTATGATAATGTCATTCTATAAAAGATTTACATTTGATCTAA
TGAATTTTGAACTTGTTCCCATAGACTTGAACAAAGGGTTGACGACAACT
CCGGTACCGTTGCCTGCTTACGCCGGACAATATCGTAAGAAATATAATCT
TTCTATAAATCTTCATTCTATTTCCTTGAATCTAAATAAATGTTTCTATA
AATGTTTGCTTCTTTAACGAAATCATTCCCTTTCAATTATCATCGCCAAA
GACTTAAGACTtatatcaaaaatcaatttgGTCCTGGTAAAAACTCGAAC
TCGTATATTTCCCCTTTTCACGTGGAAATTGTACTACTGGAAAATCAATT
CATTTGATTCCCCTCCAAGATTGGTTGGTTGCTGACTTCTTACATGAGAA
ATAATAAGATTTAGCAAACCAGACTTAAGCATCCTGAGTATTCATTTCAT
TAGCCTGAGAAACTCATTACTGGTACTTAAGTAGAATTTTTTTCCTAAAG
TCCTAAACAAAATATGCTCATAATTTACCCTCTTGAATAAcctgaaaaat
aattaaatttttcagCGATTGCAACCGCCTGTAATAAGGCTACATGTACA
TTAAAAAACAAATGCAAATGTGCCGGAACCGACGCACCGCATCCAAAACT
TACGGCAACGACATCTCCCAAGATTGTCATTTTCTCGATGGATGATTCGT
TGGGATCTTCACAATATAACGTCATCAGTGAAATTCTGGATGGGCGAGTC
AATCCTAACGGTTGCCCAGTAACAGGAACTATGTTTGTCTCGATGGATTC
GGTGCAAAGTCTTCGTTACCCAAAACTCATGTATGACAAAGGtaatactc
aaatataatcaaatttcagagtttttcagattttttaaatttcagagATA
AAATTCTTCCAAATGATAACCGACAAAGACGACTGTAAgcaaaacaagac
gacttaaagtcgaaaatttcgcctagaatttaaactacatagaaaaaaca
agaagtagagattgaagccaattcgaaatctactttacatNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNaacgaggcttaaaatcgctaacaaagagac
caatttaagaacaactgttgtttaatttttaagaactaataaacaaaggt
aatatcaccgtctatcaaaagtcatttatttgattcttataaaagcaaat
gcttgtataagaaaaatgaatatgctcatattgtgcgccaactcttgttt
attttgtaagagctaattaccgaaaggtatattaccgtctatcaagagtt
attgatttgattcttataaagtaaatgcttataagaaaaataaatNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagaactaattaccgaaag
gtatatcaccgtctatcaatagttattgatttgattcttataaagtaaat
gcttataagaaaaataaataaggtcacattgtgcgccatcccttgtttac
tttgtaagaactaatcaccgaaaggtatatcaccgtctatcaagattttg
atttgattcttataaagtaaatgcttataagaaaaataaataaggtcatt
TTGTGagccgttccttgtttactttggaacaactagttaccgaaaggtat
atcaccgtctatcaagagttattgatttgattcttataaagtatatgctt
ataagaaaaataaatatgctcatattgtgtgccatactttgcttactttg
taagaactaattaccgaaaggtatatcaccgtctatcaatagttgttgtt
ttgattcttataaagtatatgcttataagaaaaataaatatgctcatatt
gtgcgccatcctttgtttactttgtaagaactaattaccgaaaggtatat
caccgtctatcaagagttattgattggattcttataaagtatatgcttat
aagaaaaacaagtaAGCTCATaatgtgcgccatcccttgtttactttgta
agaactaattaccgaaaggtatatcaccgtctatcaagaattatggattt
gattcttataaagtatatgcttataataaaaataaatatgctcatattgt
gcgccatactttgtttactttgtaagaactaattaccgaaaggNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCCACCGTATcgagcactttcgttttctaattttttttccgatg
acaccgccgcagaaaggctatcgtaatactttcgctaagcgaaattaata
aagtcaataaattaaatttataATATCAATGTGTAAGAAATAGTTCTCTt
ctgagtctgctaaattacgtgggttacgtgcgtgtcgtgggttcgtgggt
tcgtgggtccgtgccctcgtgggtgttCGTGGGTGTTCTTTGTATacaac
tttttctttatttatatacagtaatatatttcccAGGTCTATCGaactct
atgaaataatcatgcttaacattttacaatttatggagatctttttctca
ttttgtgagcaatttttctttgaagttggCGACAGATGTTGCAGCTACAA
CATCAACTCCAAGACCATTCTATATGTTAATACTTCTGTAGAACAACGAA
TTTGTTTGATACCCTCTGACTATATCAACATTGACTTTTTCTACCACAAC
CGTAGGACATGAGATAGCAGTTCACACCAAATCGCATCGCTTTCCAACTA
CCTACTGGAAGACAGTTTCATACAAAGCTCTCGTTGACGAAATCGTCGAT
CTCAGGGACCAAATGTTCAAAGCAGGAATAAAAAATGTTGTAGGGTATCG
AAACCCTTTCTTGCAGACCTCAGGAGATACTTTGTTTACCTTGCTGAAAG
ATTTTAACTTCCGATACGATTCATCGCTTCCAACTCCTGCGCATGCGTAC
TGGTGGCCTTATACAATGGAACACAAAGTTGATTATTGCGCAATCCCACC
ATGTCCGACAAGTAAGtacttagctctagtttagacggctcacctttcgc
cctgcctattctaattgtaagAAAAAAGTGGGCAGTTAAATTGTTTGCTT
CANTCCCCTTTTGTTAACCTTTTTTATCTCACAATTTTTTGGCTATttga
gaccatgttcacacgtgacggttccgtttttATTGGTTACAATCAAGTGT
TTCATaatttctaaccaatagaatggcttcattgcGTTTCGGAGCGcaac
ggaaccgtcacgtgcgaacatggtctgaTTGTTTATTGCGtattattttc
ttaaaagtagtgCAATTTTTGATGTCTGGAAAATAATTGAGTATCGGTGA
CAGATCTAGAAGGTCGTTCAAAATATATGACGGAGAGTTTTCACTTCCAT
ATAAGGAGTATGGTTATAAAGGCCATACTCTTCGTCATGAATTTTGAACT
CCCCTTAGATCCACCACTGCAGCATTTTTGAAATATCGCAGATATAACGG
TATTTGTAGAAAGTCGTACGAGGCtatccttttgtaagatgtttgaTAGC
AAGAGTTAATGCTAAATTTCAATACTCTAACCTTCTTCTTATAGAATCCT
ACAAAGGCTTTTATGAAGTGCCTTTGGAAATCGTCAAGAATCGAAAGGGA
GGTCTTTGCTCCATGTTCGATGAGCCTGGATGTTGGCGAAATAGCCTGCA
AACTGCAGATGAAACTTATGACTATTTCAAAGAGAATTTTGAACGACATT
TCACGCATGGCTCGTCCCCATTCCCTATTCATGGACATGCTAATAACTTA
TTGGGTGGAAGTCACGGCCCACGGAAAGAAGGTGTGTAAATTTTACATTT
ATGttccctttttttaaagagggcTTTAGATTTTTCGAGAATCGAACCGT
AATTTCTGGTCTTGGTCTTCGACATTTTCTGGCTTAACGAGCAAACATCT
TTGCAAATCTCGAGAAGGACTTAGGACATGAGTTCATACAACCACATTCA
AATGAAGCTTTTCTAGAAATATAATCTGAAAGTATACGCTGAATAAAATA
TGTCGACTCTAAGTTAAAGAAATTGGAATCGGTTAGTTGCAATCCTGATT
TTTCCGCCATTATCGTGGCAAACGTTTGAATCTGATGATAGTTTCCTCCT
ATAACGCAAATTAAACGTTTGCTTCTAAAATGGCGGAAGTTAAGTATTTC
AAAAGTACATGAAAACCGCAtgctgaatttttttctcactaGGTTTAATC
CGTTTCTTGGATGAGTTGATGCGTAGGGAGGATGTCTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021508XLOC_021508Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036484-exon-sc0001472-1491911889:22324..22540TCONS_00036484-exon-sc0001472-1491911889:22324..22540Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:22324..22540TCONS_00036484-exon-sc0001472-1510915933:22324..22540Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:22324..22540TCONS_00036484-exon-sc0001472-1575043694:22324..22540Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:22763..23545TCONS_00036484-exon-sc0001472-1491911889:22763..23545Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:22763..23545TCONS_00036484-exon-sc0001472-1510915933:22763..23545Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:22763..23545TCONS_00036484-exon-sc0001472-1575043694:22763..23545Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:24166..24939TCONS_00036484-exon-sc0001472-1491911889:24166..24939Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:24166..24939TCONS_00036484-exon-sc0001472-1510915933:24166..24939Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:24166..24939TCONS_00036484-exon-sc0001472-1575043694:24166..24939Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:25171..25332TCONS_00036484-exon-sc0001472-1491911889:25171..25332Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:25171..25332TCONS_00036484-exon-sc0001472-1510915933:25171..25332Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:25171..25332TCONS_00036484-exon-sc0001472-1575043694:25171..25332Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:26313..26420TCONS_00036484-exon-sc0001472-1491911889:26313..26420Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:26313..26420TCONS_00036484-exon-sc0001472-1510915933:26313..26420Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:26313..26420TCONS_00036484-exon-sc0001472-1575043694:26313..26420Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:27569..27748TCONS_00036484-exon-sc0001472-1491911889:27569..27748Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:27569..27748TCONS_00036484-exon-sc0001472-1510915933:27569..27748Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:27569..27748TCONS_00036484-exon-sc0001472-1575043694:27569..27748Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:28498..28557TCONS_00036484-exon-sc0001472-1491911889:28498..28557Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:28498..28557TCONS_00036484-exon-sc0001472-1510915933:28498..28557Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:28498..28557TCONS_00036484-exon-sc0001472-1575043694:28498..28557Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:28989..29264TCONS_00036484-exon-sc0001472-1491911889:28989..29264Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:28989..29264TCONS_00036484-exon-sc0001472-1510915933:28989..29264Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:28989..29264TCONS_00036484-exon-sc0001472-1575043694:28989..29264Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:32829..33134TCONS_00036484-exon-sc0001472-1491911889:32829..33134Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:32829..33134TCONS_00036484-exon-sc0001472-1510915933:32829..33134Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:32829..33134TCONS_00036484-exon-sc0001472-1575043694:32829..33134Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:33718..33954TCONS_00036484-exon-sc0001472-1491911889:33718..33954Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:33718..33954TCONS_00036484-exon-sc0001472-1510915933:33718..33954Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:33718..33954TCONS_00036484-exon-sc0001472-1575043694:33718..33954Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1491911889:34366..34412TCONS_00036484-exon-sc0001472-1491911889:34366..34412Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1510915933:34366..34412TCONS_00036484-exon-sc0001472-1510915933:34366..34412Clytia hemisphaericaexon
TCONS_00036484-exon-sc0001472-1575043694:34366..34412TCONS_00036484-exon-sc0001472-1575043694:34366..34412Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001472supercontigsc0001472:22324..34412 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.154544	0.160688	0.0232636	0.050818	0.0203308	0.025183	0	0.008034	0.180514	0.574893	5.43536	1.22026	1.42628	2.90058	0.0512936	0.0134188	0.0116633	0.0170669	0.00691569	0	0	0.0404567	0.157139	0	0.0267783	0.0272829
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036484 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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