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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036483 ID=TCONS_00036483|Name=TCONS_00036483|organism=Clytia hemisphaerica|type=transcript|length=234bp
TTTGAACAGTGTGTTATTGGTACAATCAGATGATGGATTCTGTCTCTCAG
TGTTCGATGAATTGGAGAATCTGGCGCCAACTCTGTACCATCATAAAGAT
TGCACCAAATACTTCATCTGCTTGCGTGTGGACTTACTTCAGCAAGTGAT
GACATTGCAACGAGAATGTCAGAATGGAAAATTCTTTGATGAAGAACAAA
GGAAATGCTTGAGAGAACGCACTCCACGATGTGG Run BLAST on NCBI transcript from alignment at sc0001472:19444..20685+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036483 ID=TCONS_00036483|Name=TCONS_00036483|organism=Clytia hemisphaerica|type=transcript|length=1242bp|location=Sequence derived from alignment at sc0001472:19444..20685+ (Clytia hemisphaerica)
TTTGAACAGTGTGTTATTGGTACAATCAGATGATGGtaagtttaaaaaac
aaaaatggtactaCTTTAATCAGAAGTTATCGGCCTTTTAGCGCAAAATT
TAACCTTTCTAAAACAATGTCTCTTCAAACTCGGCTAGTTTTTGAAACGA
TTATTGCTGAGACAATATAACAGCAGTGAACTAGTGACCCCAAGTAATTA
TCACATTCTAAACATACATACACACATATGTGTTTTACGGTCATTATAAT
CAGGTCGTTGAAGAATCTTTAATTAGACTTTCTTACCGCATGTATAATGC
GAGTGACAGATCCTCTTTCATTGTATGAGGTCATCATTTAGTATCCGCGA
TCGAAAGTTGAGTATCCTGgatgaaaaatcagaaaatcgaaaatgaatgt
attgttcaaaaatttgattgattgatgatagaaattttcacttTAGAGAT
TTCTATGAGTTTTCTCAATGAAGAATACCACAATTAAATGTTCTTTTTTC
ACTCATGCGTAGCCATCTTTTTAACACAGCAAGCTAAGAGCTTGGGACAT
TTTCCAGTGAATTTGCGGACTTCAAAGAAGAAACATCTTTTCAGACCTAT
ATATTTATATATTCTTTCAAATCCTCGCTGAAAGAAATAAACCTTACAAa
tgtttgtctttgtaaaatatgtatataaaaactttttatctTATATATTC
TTTATTATAGTATTGCGTATTCTCTACAGTTGGTATTAATTAGTATTTTA
TTATAACTATGTCAGACCAACATTAAATAaatcggaaaataaaaaaaaat
aaaaaaaaaatatatacccACTAGACCGACTATGGTCACGAATGTATAAA
ACGGATCACCTTGATAAAAGAGTCATCAAATCTTACCGTCCGCATAAAAC
GGATCATCTCGTTGCTTAAGTAGCCTCTCTTCAGGACTATTATAAACCTC
GAAACTTGGTTTAAGGTTTCTATTCCAGAATTAAAACCTGCTAGAAAAGA
TATTTTCACTGCAAAATACTCATCTCTATCTCCTTCGTTATAGGATTCTG
TCTCTCAGTGTTCGATGAATTGGAGAATCTGGCGCCAACTCTGTACCATC
ATAAAGATTGCACCAAATACTTCATCTGCTTGCGTGTGGACTTACTTCAG
CAAGTGATGACATTGCAACGAGAATGTCAGAATGGAAAATTCTTTGATGA
AGAACAAAGGAAATGCTTGAGAGAACGCACTCCACGATGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036483-exon-sc0001472-1491911889:19444..19478 | TCONS_00036483-exon-sc0001472-1491911889:19444..19478 | Clytia hemisphaerica | exon |
| TCONS_00036483-exon-sc0001472-1510915933:19444..19478 | TCONS_00036483-exon-sc0001472-1510915933:19444..19478 | Clytia hemisphaerica | exon |
| TCONS_00036483-exon-sc0001472-1575043694:19444..19478 | TCONS_00036483-exon-sc0001472-1575043694:19444..19478 | Clytia hemisphaerica | exon |
| TCONS_00036483-exon-sc0001472-1491911889:20487..20685 | TCONS_00036483-exon-sc0001472-1491911889:20487..20685 | Clytia hemisphaerica | exon |
| TCONS_00036483-exon-sc0001472-1510915933:20487..20685 | TCONS_00036483-exon-sc0001472-1510915933:20487..20685 | Clytia hemisphaerica | exon |
| TCONS_00036483-exon-sc0001472-1575043694:20487..20685 | TCONS_00036483-exon-sc0001472-1575043694:20487..20685 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001472 | supercontig | sc0001472:19444..20685 + |
Blast
The following BLAST results are available for this feature:
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