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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036473 ID=TCONS_00036473|Name=TCONS_00036473|organism=Clytia hemisphaerica|type=transcript|length=902bp
attttcagcattttttgagcattttgatgtaatttcttaagaaattgcat
gtttttaagtctccaaagccttagtatgttcttagaatgttcttaaattt
ttggccctcgaagccttatgttcttatatagtttgttcttataaaaaaac
gtgtatatagaGTTAGAATGATCAAGAAAGTTTATTAGCCGCTTGTGCAt
aagtttttggaaaattttgtcgATGTTTGAAAGAAGAGAGATGGGCCTGT
AGTTTTCAGCATCAAATGGAGAGCCCTTATTTTTGAAGACGGGGATGACT
TTCGCTTTTTTGAGTTGACTAGGAAAGATACcagtaaagaaagaaagatt
tatgACATCTGCAAAGATTGAAGAAAGACTTTTCAGATTTGAGGAGATAA
TTCGGAAAGGAATGCTGTTGGGACCTGAAGCTTTATGTTCACTGAGAGAT
GAAATAACTTTGGAGATTTCATTTTTGGAAGTTGGAGAAACAAGAAAGTG
ATTGACGTTTCGATTGTCATTCTTCAGCCATTCTGAGAAATGATGACGCG
TGTAAGGAATTTTAGAGCATATCTTACCTGCAATAGTAGAGAAAAAGTCG
TTAAAAGCTTCAGAAACTTCTTCAGGATCAGAAGATAAAGAATCATTGAT
ATTCAAGGGAATGCCagtggaagaagaagaagaggatATAATCTCTCTGA
CGCCTTGCCATAGTTTGCGAAGATtaccagaattttgaaaaaagtaacga
GAATAGTAAAGTTTTTTACTGGCACGAATAAGAGACATAATTCGatttcg
ataaaatttatacCTACCACGGAGAAATTTTTTAAGATCAGGTGAAGAAT
CGGGTACTCTCAGATAGTCGTTGTTAAGGTTATCTCTGATTTCCATGGAG
TA Run BLAST on NCBI protein sequence of TCONS_00036473-protein >TCONS_00036473-protein ID=TCONS_00036473-protein|Name=TCONS_00036473-protein|organism=Clytia hemisphaerica|type=polypeptide|length=269bp
YSMEIRDNLNNDYLRVPDSSPDLKKFLRGRYKFYRNRIMSLIRASKKLYY
SRYFFQNSGNLRKLWQGVREIISSSSSSTGIPLNINDSLSSDPEEVSEAF
NDFFSTIAGKICSKIPYTRHHFSEWLKNDNRNVNHFLVSPTSKNEISKVI
SSLSEHKASGPNSIPFRIISSNLKSLSSIFADVINLSFFTGIFPSQLKKA
KVIPVFKNKGSPFDAENYRPISLLSNIDKIFQKLMHKRLINFLDHSNSIY
TFFYKNKLYKNIRLRGPKI Run BLAST on NCBI transcript from alignment at sc0001464:34066..34967 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036473 ID=TCONS_00036473|Name=TCONS_00036473|organism=Clytia hemisphaerica|type=transcript|length=902bp|location=Sequence derived from alignment at sc0001464:34066..34967 (Clytia hemisphaerica)
TACTCCATGGAAATCAGAGATAACCTTAACAACGACTATCTGAGAGTACC
CGATTCTTCACCTGATCTTAAAAAATTTCTCCGTGGTAGgtataaatttt
atcgaaatCGAATTATGTCTCTTATTCGTGCCAGTAAAAAACTTTACTAT
TCtcgttacttttttcaaaattctggtaATCTTCGCAAACTATGGCAAGG
CGTCAGAGAGATTATatcctcttcttcttcttccactGGCATTCCCTTGA
ATATCAATGATTCTTTATCTTCTGATCCTGAAGAAGTTTCTGAAGCTTTT
AACGACTTTTTCTCTACTATTGCAGGTAAGATATGCTCTAAAATTCCTTA
CACGCGTCATCATTTCTCAGAATGGCTGAAGAATGACAATCGAAACGTCA
ATCACTTTCTTGTTTCTCCAACTTCCAAAAATGAAATCTCCAAAGTTATT
TCATCTCTCAGTGAACATAAAGCTTCAGGTCCCAACAGCATTCCTTTCCG
AATTATCTCCTCAAATCTGAAAAGTCTTTCTTCAATCTTTGCAGATGTca
taaatctttctttctttactgGTATCTTTCCTAGTCAACTCAAAAAAGCG
AAAGTCATCCCCGTCTTCAAAAATAAGGGCTCTCCATTTGATGCTGAAAA
CTACAGGCCCATCTCTCTTCTTTCAAACATcgacaaaattttccaaaaac
ttaTGCACAAGCGGCTAATAAACTTTCTTGATCATTCTAACtctatatac
acgtttttttataagaacaaactatataagaacataaggcttcgagggcc
aaaaatttaagaacattctaagaacatactaaggctttggagacttaaaa
acatgcaatttcttaagaaattacatcaaaatgctcaaaaaatgctgaaa
at Coding sequence (CDS) from alignment at sc0001464:34066..34967 >TCONS_00036473 ID=TCONS_00036473|Name=TCONS_00036473|organism=Clytia hemisphaerica|type=CDS|length=810bp|location=Sequence derived from alignment at sc0001464:34066..34967 (Clytia hemisphaerica)
TACTCCATGGAAATCAGAGATAACCTTAACAACGACTATCTGAGAGTACC
CGATTCTTCACCTGATCTTAAAAAATTTCTCCGTGGTAGgtataaatttt
atcgaaatCGAATTATGTCTCTTATTCGTGCCAGTAAAAAACTTTACTAT
TCtcgttacttttttcaaaattctggtaATCTTCGCAAACTATGGCAAGG
CGTCAGAGAGATTATatcctcttcttcttcttccactGGCATTCCCTTGA
ATATCAATGATTCTTTATCTTCTGATCCTGAAGAAGTTTCTGAAGCTTTT
AACGACTTTTTCTCTACTATTGCAGGTAAGATATGCTCTAAAATTCCTTA
CACGCGTCATCATTTCTCAGAATGGCTGAAGAATGACAATCGAAACGTCA
ATCACTTTCTTGTTTCTCCAACTTCCAAAAATGAAATCTCCAAAGTTATT
TCATCTCTCAGTGAACATAAAGCTTCAGGTCCCAACAGCATTCCTTTCCG
AATTATCTCCTCAAATCTGAAAAGTCTTTCTTCAATCTTTGCAGATGTca
taaatctttctttctttactgGTATCTTTCCTAGTCAACTCAAAAAAGCG
AAAGTCATCCCCGTCTTCAAAAATAAGGGCTCTCCATTTGATGCTGAAAA
CTACAGGCCCATCTCTCTTCTTTCAAACATcgacaaaattttccaaaaac
ttaTGCACAAGCGGCTAATAAACTTTCTTGATCATTCTAACtctatatac
acgtttttttataagaacaaactatataagaacataaggcttcgagggcc
aaaaatttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036473-exon-sc0001464-1491911889:34066..34967 | TCONS_00036473-exon-sc0001464-1491911889:34066..34967 | Clytia hemisphaerica | exon |
| TCONS_00036473-exon-sc0001464-1510915933:34066..34967 | TCONS_00036473-exon-sc0001464-1510915933:34066..34967 | Clytia hemisphaerica | exon |
| TCONS_00036473-exon-sc0001464-1575043694:34066..34967 | TCONS_00036473-exon-sc0001464-1575043694:34066..34967 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001464 | supercontig | sc0001464:34066..34967 . |
Blast
The following BLAST results are available for this feature:
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