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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036469 ID=TCONS_00036469|Name=TCONS_00036469|organism=Clytia hemisphaerica|type=transcript|length=4162bp CTTGAATGACGTCAATTTCTGAAGATCTGCGTTTTAAATAAACCGTCGTG AAAGTTTTTGCTTGGACATGGCAATTGGTCAGAGTGATTTTGAATCTTTG TTCGTGTTGGATGGAAGTCATGGATAATGGTTTTGTAACCATCTCCTCAG GGAGAGGACCACGTCTTTGGCACAAATGGGTCGGTTTATGTCGTCGTATC AACCATTCTCTAGAGAAAGTCTTTACAAATCTTGGTTACATCATCACAAA GCGACCGAATTTGACCATCATTCTTGGTGTGCTTATATCCTTAGCATTGA TAGGTGGATTTGCTCGATACAACCTCATCAAACGAGCTGAAGATCTTTAT TTACCAAAGAACAGCGAAGCCAGTAAAGATCTTGATCGAGTCGAAGAAAA CTTTCCAATGAGTTTCAAATCAGAGTCGTTCATCATTCGGCCTAAAGACG CCAATGCGCCATTATTgacggaagaaattttcaaagaagcGTTAGAGATA CACCATGAGATCATGAATATTCCAGGTTTAACAGATGTTTGTATAATGAA CGAACGGTTGAACACGTGTGCTGTTCTATCACCGttagaatttttcaatt tcaacatcTCAAACATTCAAAACGTATCACAGAGATTACATCAAGTGTTA AATGATTCTAAAGTTCTATCAAGTGATGGTCGACAAGCGTATACGAACTT CCCTTACTATTTCTCATATTTCGAAACAACTTTAACAACCCAGGGCATGC AAATCGTAAGAGCTGACGCTTTGAAGACCGACTATTTTGTAAAAGATCCG TCGAGTAAAGGTATTTATGGAAAGCTGGAAAGTTTCGAAGATAAATACGT TGATATCATGTCCAGAAAGGAGAGAGAGCTTGACAACAAAGGTTTAATTC TTCTATACAATTTTGGACGAAGCATTGACATCTCAGTTAGTGACTCAACA CAGAAGGACATAATTTTAGTACCTGTGGCTTTACTGCTGATGGTTATATT CTGCGGGCTGTCATTAGCCCGATTCAGGAACCGAATACTTGGCCATTTCA ATTTAGCACTTGCTGGTGTTCTAATGTTATTCTTAGCAATCGCTTCTGCG TTTTGTTTTATCATGCTTATCGGAGCACCGTACATCGCATTCGCTGGAGT GCTACCTTTCCTTGTTCTCGGGGTTGGTATCGACGATATATTTATTATCA TCGATTCCGTCGATCGCCAACATCCATCAATCAAATCGAACACCAGAATT GCCAAAGCTTTGGGTGAAGTTTGCGCCTCTATAACAATGACTACTTTAAC GGATCTTGTAGCTTTTTTTGTTTCCATGGTGACTGATTTCCCAGCAATCC GATATTTTTGCATGTATGCAGCATTTAGTATCACTTTCTGCTACATCTTG GTTATCACCGTGTTTGTGGCTTTGTTGTCATTTGACGTGAAAAGGATTGA GGCGGGACAGTTCGATGTCATTCCATGTGTTGCCAATAATAAAGAAACGA CTGAGGAGGTCTGGGAAGAAGCAGGTGAATCCATGATTAACAAGCTGATC ACGAAATACGCAGAAGTATTGATGCTGAAACCCATCAAAGCCATTGTCAT CATCATTTCAATTGGGATGACTGCATTCGGAATCTACGGTGCAATCAATG TTGACCAAAGCTTCAATCAATTAGTGTTGGGTCTTAAAGGATCAGCATAT GTCAAATACTTCGGTTATTTTGAAACTGGTTTCCCCAGTGGAATCCCAGT TAATGTAGTTTTAGATGCACCTTTGAACTACACAGATTCATCTTTACAGC AACAGTATAGCAATTTGAGTCAGATTGCGATTGATAACAATTATATGGAA TCACAAACGTTTAACTGGATGCGAGATCTCCTCAGTTGGAGTAAAAACGA AAATATCACAGCTtcaggccgtcatttttatccATCCTTATATCTCTTCT TGCAAGAGAACCAACATTATTTAGTTGatatcaaatttcataaaaattgg TTACAAGATATGTTAGAATGGTCAGTCGTACGGCAAAAGTTGGTCACTGT CGATAATTTCTACCAGAATTTAGAACAGTTTCTAATGGAGACTCCACAGA TAAGCGCTTATATGAAGTATAATTTCACAACAGACTCGTTTTTATTAAGA TCCAATACGAAAGAGACTTTCAAAACCTGTGATGGTGAATGCTTTTTAAT CAAAGCATCAAGGTTCATCATCCTTACCAAAGCTAATCATTTCTCCATCT ATCGAAGAGACGCTATGTTGTCACTACGTGAAGATTTGAGAACGAAAACA GATTTACCGGTATACGGTGTTTCATATAATTACATATACGTGGAACAGTT TGTGGTTATTCTACCAGATACTATACGTAATCTGGCTATTTGTGCATCCG CCATTTTGTTGATCACACTACCCTATTTAGTAGATCCGAAAGtgaccttt tttgttttttcgggATTTGTATGTCTTATGTTCGAGCTGTTTGGCGTCAT GTATTTATGGGACGTTTCACTGAATGCGATTTCTATGATAATAATCGTCA TGGGGATAGGGTTTTCAGTTGATTATTCTGCTCACATTGCGCATGCGTTT GTCATTTGTAATGAGAAGACATCGGAGAGACGAGTCATCTATGCTATGAG AACGATGGGTGCAAGTGTCACAATGGGAGGTATATCAACATTCGTGGGAG TGGTAACAACAGCTTTTGCACAAAGtgaacttttcaaaatcttcttcAAG ATGGTTTTTGGGATTGTTGTTCTTGGTTTGATTCATGGCTTGGTCTTCCT GCCCGTCTTTCTCGCAGttttttgcaACTATAATGTTCCAATGACCGTCG AagttgatgaagaagaagagaacGGAAATCTTTCGcccaagaaaaacaaa atgaatgGAGAAGAAGAACTTTTGACTATGGAAGATATTCCTGATACTGA TAAAATGTTATAGTACACTGTCCATCATAGCATATACGtttgtataagaa caaactatataagaacataaggcttcgatggtcaaaatgttaagaataag ttaagatcATATTAAGGTCTTGTgtactctaaaacacccaatttcttagg aaaaaatgaacaaaaatactccaaaaatgtcatttaagaacgtttttagg cctaaaactcaaaaagttaagaacatcccaaggcttgaaaaattttgtgt atACTATTTCCTTAATTTTTCTGAGGAAGAAGACTtgactGgttaaaaaa tcacatttagCATTTTGTTTATGGTCTCGTTTTCATGGATTCATAAACAT CAAGGTTTGGATAGATTCTATAATTCTTTTATTGtacatattttgaattt tcaaatcaaattgaGATTCTTGTTTTGTAATTATCTTAAGAAAATATAGC CTTGGaggaagatttttttgaaaatgcatAGGCTGCTTTTGAGTACATTT AAATTTTGGGCCATCttcggaggtcctataaattaacccacaATCATGGC CAAAATTAATGTAATTCGTCACTTTTTTGGTACGAATTCAGTCATtttat tttcctattttcttaTTGCATTAATCTTCAGGTAGCTCCATTCCGTATGT AGCTTACTGTTtttactaccttaagggaactaattttggcgggaactaat tttgacgggaagcaaatatcctaaaaaaatttaattttggcgggaactta ttttggtgaatagtgaatttttttaatttaggcgGGAACTgtttttggcg aatgacagcataaatctgttctattttgccttatttgagcaattttgatg aatttcaggggttatttaggcaaggaaacaaaaaatttacttttggcgga aacttattttggcgagtgagcaaaatatttaattttggctagaactaatt ttggcaaatttcgtctaaattcgccaaatccgccaaaattagttcctgcc aaAATAAGTCNCTGGAAGTTCCATCCCGTAGATGTTATTTGGTAGACATG TGCTTTCACCATTTTTGGGGATAGTTCTGCAAGGGTTATCAGCGGTGCCA ATCAATCTCCTTGGCAACGAATCGACCAGCGTTGCCATTATCACCATGGT TACCAAGAGGGTGAGAATATTCTTTTGTGTTGAGCTTCTTGAATTCGTGC TCTTCATCTTAG Run BLAST on NCBI transcript from alignment at sc0001464:17347..31387- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036469 ID=TCONS_00036469|Name=TCONS_00036469|organism=Clytia hemisphaerica|type=transcript|length=14041bp|location=Sequence derived from alignment at sc0001464:17347..31387- (Clytia hemisphaerica) CTTGAATGACGTCAATTTCTGAAGATCTGCGTTTTAAATAAACCGTCGTG
AAAGTTTTTGCTTGGACATGGCAATTGGTCAGAGTGATTTTGAATCTTTG
TTCGTGTTGGATGGAAGTCATGGATAATGGTTTTGTAACCATCTCCTCAG
GGTAATATTATTAACATTTCAATTTTTTGCAGTCATGATTATATCAGCTT
TTGCATCAATATCATTACAGATTTCACAAGGGCGCTCCTACGCTTGCGTT
TTCGATAACGTCGTCGAATAGCAATTTCTTTGCATTTTCGGTACCAGTCT
TCTGGTGACCGTGCCGATAAGGGATTATAGCAGGTGAGATGGAGTTTTTA
TAAGATTTTTTATAAGACTTTAATAATTATTTGGACGCAGTCTCATCCAA
TATGAAAAATATTGGGCTATGAGAAGAGATATTGGACTCGGCGAAGCCTC
GTCCAATATCTTTTCTCGCACGCCCAATATTTTTGCATATTGGATTCGAC
TTTGTCCAATAACTGCTTAATAGTAAAAACTTAAATTTAAAATTTCCATC
AGATTCTTGAGTTAACCTTACGCATATTTTACAGACCGGCCTGCAAAGTA
CCAACTTCAGGGACCAACTTCTTTCTATTACTGATCTCTTTTACTTGGTA
AATCAGGTTTCAGGAACGCGTTTTGATTCATCCAGTAGGCGTGGTCAGTC
GGGAACACTATATGAAAAAGGCAACTATTGCCTTAACGGGAAATATTTCC
CGAACAGGAAGGTGGAAAAAATGGCTAAGACTTTCCAAATTGGGAAGTGC
ACCAGTTTCCCGATCGGGAAAGTGGCCTCTGAGCACTCTGGAAATGCCTG
TTGAAAGTTAAAAACCTGTCTCTCTTGTAAAGGAGCGAAAATAAATAATA
TTTACCAGGTAGTTAAAAAATCCACCGGTAATTGCTTCTTATTCTACTTT
CCCTATTCCCAATTAAAAACTTCCCTATTTGGAAACTTTTTTTTGATAGG
GAAACAAAAATCTGCTTTGTTTACAAAAATTATATTTCCCGTTCGGGAAC
GACGAAAAGTTCTTGACCAAAACGGGAAACAGAAAAGTGAAGAAATTTTC
AATCTGGAAATAGTTTCCTTCTCGAGTTATTTATTTAGTTATACTTCCCG
TTAAGGCAATAGTTGCCTTTTTTCATGTAGGGGTACCGACTGGTAGGGGG
GGACTATCTTGATAACAATTGGATGAGCCGTTGTACGAAAAGTGGTACTG
GGAGTGTGGTATTAGATAAGATTACTTGCTCTTTAATGAAGTTCGTTTTC
TGTCCACCTAACTTATACCGTGAGTATCCACGTATGTAGGATTTCCTTTA
AAAACAACCAGTGACTGTAAATACTCGGCAAGCCTTGTCACCAATACGAT
CTTTACTGACCCTGTATATCCCGTATCCCACCTCGAGAAGACCGTGTAAC
CGTTATTTTCCGCTTGGGCAATAACAACAATCTAACAGTTCAACAGATTT
TGAAAGTCTTTAGTAAAACTTTACATGGCAAACAGTATTGATAAAAATGG
TTCAGAGATATGGAATTAGGGGGACACCAATATATTTCAAACCCGATATT
TGATCAAACATGATATAAAGCAATGAATTCATTTGCCAATATGTTCAGTT
CAATGACGGTATAATTTATTTTATCGATTTTTGTCACAACCTCTATAATA
TCAAATGAGTAAACATTCTAATTCAATTATGTTCTATGATGAAACCATGG
ATAGTAACCGAAGATTAAGCTATCAAATGCAGAGACACTCGTTTAAAGAC
ACAATCTGAAAACAGTAGTATGTGCAGTGTAATAGAGGTGTCACTGAAAA
TACCATTAAGTATAATTCACTTTCTGCTCTATCTTTTCTAATAGTTAGAG
TAGGTGGAAAGTGAACAAAAAGTTAGCAGTTGCAATCTTTGTTTTGAAAA
AGATTGAAAACAGTCAATGCGAGCGATGCCTGATTATTCACTTTTTTTGG
CGTCAATAACCAGTTTTAGCGATTTTTGTGATCGTGATGAGAGTAATAAA
TTTCATCGTCGGGACCGGATGAGGGCATGAGAGAGATATATAGTTTTCCC
CTGTAGTGAGAAGCTTGTTAATAAACATTTTTAAGAACAAGGAAAGGGGA
AAGCATGATTCTTTGTCAGTATTTTTGAGCAATTTTAATTTTCGTACGTC
ATTTATCTATGAGTATTTCTGCCTTTGGTGAGAATTGTGTCTTCAGCAAA
GTGTGTATTTGGCTACCATTTCTTCGAACACAAAAGTGAAAGAAGGAAGT
CTATAGTATTGTCATCCTTCTACTTTAATCCTAATAATACATTTCAATTC
AAAAACTAGGTAGTCGGTGAAATTAGATGCGAGTGGATTTGTCTGTTTTC
TATTAAACGTGACTAAATATAAGTCTTCCTTCAGTTGTACCGTACATTCA
TCTTAGTTGTAGAAGGTCATTGGTTTAATGACTGGATTACCACGGATTAT
TTTACGTTCGTTTTTTGTCATATAAATGGATTAGGATGGTCTAACATCTG
CGAAGACTTTTTGAGGAACCTTTCTTATTCAAGTCACGTATAAGGAAAGC
TTTCGAATCGAATCTCAAAAGGATGGTTCATTTAGCGCTGTCGACCTTTT
AACCAAAATAGACTCTTTTTTTATTATTTTTAGCCCATACTTTCAGTCTG
GTCCCTTCGGGTGTTTTTGCACTTTTTAAAGGTAAATGAAAGATATAAGG
GTTGAGAACCAGTGTCGAAAAGCAGGTGAATCTTTCTAGGCGCTATCAAT
TCTTAATCATTTTCAGTGTTCTTTTTTTTTCTCAAACAATCAGTGAAATT
TCATATGTTCTCTTCTTCATTCACGATTCTGCTTCTATATGAAAGATGGT
TTGAGATATACATTTTTAATATTTTATTTTTCGCTCTTCTTCTCTTCTCT
CACGTTTCTCTTATATTTTGAAGAAGAAATATTATAGTATTGGATTTAGA
AAATTTTTCATGCGAACAAAAAATCTTAAAATTTGAAAAATAAAACAATA
TTGGAGAAATTGATGTTTAAATGGCAGAGCAGGAAAATACAGACGGTTTG
CTTGATCAAACGAAACTGGGAAGAAACGAGCTAAAATTGAAACGGTAATA
TCTGATTGGTTGATGGTTTCTTAAAGAATTATAAATACTCTGTGGTTTAA
TTATTGTAACAGCTTAATTGAGATACATAGTTTTTAGAAATTACTGACTG
TCCACTCTTGTATATAGACATTCTTCACATTGCAGATGTGTGTTCTTCGT
AATGCAAAAGCCCGGTTGAGGGGGTACTAGGTTTGCGAGATGACGCGTAT
GTCAAAGCCTAAGTTTGAAAACCTTTGAAAGACTGAATTTCGAAAATTTT
GCTCCTTTTTTGACGTGTTTGCGACCTTTGGCAACATTTGTTTTCCTCCT
TTGAAAATAATGTTTTTATAATCAACACACCCCTGTTTCACAGAACCGGT
CACATTTTTTTACAATAAATAGATACTTCTTACCCACTCCTTCTTGATTA
AGCCTTCTATATGGCATGGTTAATTCTCACTTTGTTGATCAAAGACTATT
TACTGGGGAATCGAAAATAACCTCAAAGGTGGCTGATGAAAAATCCTCAA
ATTACCAAAACAATCAACAAATCTGAATAAAAAAACATCAAATAAAAATC
TTAATTCTGGTAAAGCCCCTGTATGATCCTTGGTACAGCTGATAAATGCT
TACCACGTTCAGTGGCACATCAACGTACCCTGTTTAAGGGGCGTTTACCC
CATTATAGGATAAAAGGAACCCTGTGTGTGGTGTGTGTTTCATTAGGTAA
GAATCTTGTGAANAATGAGTAAACATTCTAATTCAATTATGTTCTATGAT
GAAACCATGGATAGTAAGCGAAGATTAAGCTATCAAATGCAGAGACACTC
GTTTAAAGACACAATCTGAAAACAGTAGTATGTGCAGTGTAATAGAGGTG
TCACTGAAAATACCATTAAGTATAATTCACTTTCTGCTCTGTCTTTTCTA
ATAGTTAGAGTAGGTGGAAAGTGAACAAAAAGTTAGCAGTTGCAATCTTT
GTTTTGAAAAAGATTGAAAACAGTCAATGCGAGCGATGCCTGATTATTCA
CTTTTTTTGGCGTCAATAACCAGTTTTAGCGATTTTTGTGATCGTGATGA
GAGTAATAAATTTCATCGTCGGGACCGGATGAGGGCATGAGAGAGATATA
TAGTTTTCCCCTGTAGTGAGAAGCTTGTTAATAAACATTTTTAAGAACAA
GGAAAGGGGAAAGCATGATTCTTTGTCAGTATTTTTGAGCAATTTTAATT
TTCGTACGTCATTTATCTATGAGTATTTCTGCCTTTGGTGAGAATTGTGT
CTTCAGCAAAGTGTGTATTTGGCTACCATTTCTTCGAACACAAAAGTGAA
AGAAGGAAGTCTATAGTATTGTCATCCTTCTACTTTAATCCTAATAATAC
ATTTCAATTCAAAAACTAGGTAGTCGGTGAAATTAGATGCGAGTGGATTT
GTCTGTTTTCTATTAAACGTGACTAAATATAAGTCTTCCTTCAGTTGTAC
CGTACATTCATCTTAGTTGTAGAAGGTCATTGGTTTAATGACTGGATTAC
CACGGATTATTTTACGTTCGTTTTTTGTCATATAAATGGATTAGGATGGT
CTAACATCTGCGAAGACTTTTTGAGGAACCTTTCTTATTCAAGTCACGTA
TAAGGAAAGCTTTCGAATCGAATCTCAAAAGGATGGTTCATTTAGCGCTG
TCGACCTTTTAACCAAAATAGACTCTTTTTTTATTATTTTTAGCCCATAC
TTTCAGTCTGGTCCCTTCGGGTGTTTTTGCACTTTTTAAAGGTAAATGAA
AGATATAAGGGTTGAGAACCAGTGTCGAAAAGCAGGTGAATCTTTCTAGG
CGCTATCAATTCTTAATCATTTTCAGTGTTCTTTTTTTTTCTCAAACAAT
CAGTGAAATTTCATATGTTCTCTTCTTCATTCACGATTCTGCTTCTATAT
GAAAGATGGTTTGAGATATACATTTTTAATATTTTATTTTTCGCTCTTCT
TCTCTTCTCTCACGTTCCTCTTATATTTTGAAGAAGAAATATTATAGTAT
TGGATTTAGAAAATTTTTCATGCGAACAAAAAATCTTAAAATTTGAAAAA
TAAAACAATATTGGAGAAATTGATGTTTAAATGGCAGAGCAGGAAAATAC
AGACGGTTTGCTTGATCAAACGAAACTGGGAAGAAACGAGCTAAAATTGA
AACGGTAATATCTGATTGGCTGATGGTTTCTTAAAGAATTATAAATACTC
TGTGGTTTAATTATTGTAACAGCTTAATTGAGATACATAGTTTTTAGAAA
TTACTGACTGTCCACTCTTGTATATAGACATTCTTCACATTGCAGATGTG
TGTTCTTCGTAATGCAAAAGCCCGGTTGAGGGGGTACTAGGTTTGCGAGA
TGACGCGTATGTCAAAGCCTAAGTTTGAAAACCTTTGAAAGACTGAATTT
CGAAAATTTTGCTCCTTTTTTGACGTGTTTGCGACCTTTGGCAACATTTG
TTTTCCTCCTTTGAAAATAATGTTTTTATAATCAACACACCCCTGTTTCA
CTGAACCGGTCAGCTTTTTTTACAATAAATAGATACTTCTTACCCAAATG
GTCGTAAATTGAAGCCACTCCTTCTTGATTAATNATGTGTGTTCTTCGTA
ATGCAAAAGCCCGGTTGAGGGGGTACTAGGTTTGCGAGATGACGCGTATG
TCAAAGCCTAAGTTTGAAAACCTTTGAAAGACTGAATTTCGAAAATTTTG
CTCCTTTTTTGACGTGTTTGCGACCTTTGGCAACATTTGTTTTCCTCCTT
TGAAAATAATGTTTTTATAATCAACACACCCCTGTTTCACAGAACCGGTC
ACATTTTTTTACAATAAATAGATACTTCTTACCCACTCCTTCTTGATTAA
GCCTTCTATATGGCATGGTTAATTCTCACTTTGTTGATCAAAGACTATTT
ACTGGGGAATCGAAAATAACCTCAAAGGTGGCTGATGAAAAATCCTCAAA
TTACCAAAACAATCAACAAATCTGAATAAAAAAACATCAAATAAAAATCT
TAATTCTGGTAAAGCCCCTGTATGATCCTTGGTACAGCTGATAAATGCTT
ACCACGTTCAGTGGCACATCAACGTACCCTGTTTAAGGGGCGTTTACCCC
ATTATAGGATAAAAGGAACCCTGTGTGTGGTGTGTGTTTCATTAGGTAAG
AATCTTGTGAATGTTTCAAGGAATAATTGCTTCATCCTTTGAATTATTAT
CATCAATTACTAATCTAAACATTAGTTTCGTGTATGACAATCAGTGTTGA
TTAATTCAAATTATTCAGAGGTAAAAAGGATGTATTTCTCTGGAAACTCA
TCATTTTTTCGCTCAACAGTTTATATGTATTGGTGAAGGTCTGAACTGAA
ATATCGGTTATTCGTTGTATGCTTGTATCATTTACCAATGTGAGTAGCTC
AATTTTTGCGAGACATGCTTGGCAGTACTCTAGAAGTAGGAAGCCCAGCT
GGCAAACGTCGTTTTAGCGTTACATGAAAGTTAAGGACGTCAGATTGACG
TTGATATAACTTTCTGTACCATCTTGAGCACAATTTTATTCGAGTTGAGG
AAATTTCAAAAGTTGAAGTATTATTAACGGAAGGGACTAGAAAACATTGT
TTGAGTTAAGGAGACATTCGAGTTCTAGATGTTCGAGTTAAAGAGATTCC
GCTGTATATCTACAATCACCCCTGTGGTAGTCGGCAGTAGAAAGTATTTT
CCTAGACTCTTCATGTGTTTTTTATCACTTAAAACCTACACGTTTTTTTT
ATAAGGAACACATGGGCAAGCGAAATCGTCGGCCTTTTCAATACACGTCA
GATCTGAATCTGACGGTATTCCAAAAAACATTAGACGTATTATAGAGTAG
TATGGTTGTAACATGATATATAATATACTATTTAAAAAAATATTTCGCCT
GCCTATACATTGCGAGCTTGCCACACGTTTATAAGGAGCTCGTCGAGGCT
GAAAATGGTCCAAAAAATAAGGAATGGTTAAGGAACTGGTCAGGCTGAGA
ATAAGAAACTAAGTTTTAAGGAATCCAATTTTTGCGAATCCAAACTTAGT
AGCTATGTAAAAAAGGAACTTGATAAGGAACTTTGATGTTGAAATTCTCT
GTAAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTCCTTATAAA
AAAAAACGTGTACCAAAACTTCAGAGTGTGGTTTCAGTTCTCTGGGGCTC
CGCATCTATTAAGGTCGGAGGCTTGAGGCTAAAAGGAGGTATAAGAACAT
TCAAAATTTTTGAAGTCTTTGGATGTTCTTAGCTTTTTGAGTTTTAAGCC
TAAAAATATTTTTAACATGTTCTTATTTTCACCATTTCGTGAGTATTTTT
TGTCCATTTTCCTAAGAAACCGGGTGTTTTAGAGTTCGCAAATCCTGGCT
ATTTATCGAAGCCTTTTGTTCTTATATAGTTTGTTCATGTTTGTTCTTAT
AATATGACTGCACTGATTTTAGCTTATGATATGAAAGACAACCAAAGAAA
TTATAGAAGCAATGCTAGAAAAAAATGCGGGGAGACTAATCCTAGCTTAC
TCTCGGCAACGTCATAACTGTGTTTTTCATTCAATAACCTTTTTATAATG
TTGTTATAACGGTCGCCACCACCCACCACACCAAAAGAATCACTTTTTCA
GGTTTATTGGTTTTTATCTCAAAGCGCAATCTCTCCTGTAATGAAGCTGA
AAACAAGATGCCTGCCAAGTTTCTTTATCTGTTATAATTTTCTTGTCTGC
TTTTTACGTAAAAATTAAATAGGCTTTCTTAGAAAAGCTTTATATATTTT
TTAAAGTTAAGTCGATTTGTATGATAATTTTCTCTTTTTGTAGCAGACTG
CTCTTCTTTAAAAGTTTTGGTTGGTGTTCATTCACTTCATATGTTTTATA
GATGGTAGAATGACATTCATTTATCATGTATTTTAGGAGAGGACCACGTC
TTTGGCACAAATGGGTCGGTTTATGTCGTCGTATCAACCATTCTCTAGAG
AAAGTCTTTACAAATCTTGGTTACATCATCACAAAGCGACCGAATTTGAC
CATCATTCTTGGTGTGCTTATATCCTTAGCATTGATAGGTAAGATGTTTC
AAATATTTTTAAACCCCTGTCACACTGTCCATTTACTCACAACATGCGTG
AATTCGAAAACGCCGGATACTTTGAATTAATAAGTTGTGGACTGTTGTCT
TTTTAATCTTGAAATTCATCCTCTTTATGTTTTGTCAAAAATGAGGCTTT
CAATACCGGACCCTTTAAAATACAGAAAGATTTCGTCAAAAGAAGCTCTC
CAAAAAGTTCATCGATTCATCTACTAAAAAGACATTGATTTTGTTAAAGT
TAACTTCCTCTTTTCCCAACACATAAGGTTTGTTTTGTTTAATCATAGTA
CTACTTTTCGACTTGGGAAAAATCTAACTGTATCGTCGATCTTCAGCGAT
TCCGCCATTTAAAAGGGTGGAAAGGTATCCCGTTGCTCATTTACAAATAT
GCATTTCTTTATCAAACAGGTGGATTTGCTCGATACAACCTCATCAAACG
AGCTGAAGATCTTTATTTACCAAAGAACAGCGAAGCCAGTAAAGATCTTG
ATCGAGTCGAAGAAAACTTTCCAATGAGTTTCAAATCAGAGTCGTTCATC
ATTCGGCCTAAAGACGCCAATGCGCCATTATTGACGGAAGAAATTTTCAA
AGAAGCGTTAGAGATACACCATGAGATCATGAATATTCCAGGTTTAACAG
ATGTTTGTATAATGAACGAACGGTTGAACACGTGTGCTGTTCTATCACCG
TTAGAATTTTTCAATTTCAACATCTCAAACATTCAAAACGTATCACAGAG
ATTACATCAAGTGTTAAATGATTCTAAAGTTCTATCAAGTGATGGTCGAC
AAGCGTATACGAACTTCCCTTACTATTTCTCATATTTCGAAACAACTTTA
ACAACCCAGGGCATGCAAATCGTAAGAGCTGACGCTTTGAAGACCGACTA
TTTTGTAAAAGATCCGTCGAGTAAAGGTATTTATGGAAAGCTGGAAAGTT
TCGAAGATAAATACGTTGATATCATGTCCAGAAAGGAGAGAGAGCTTGAC
AACAAAGGTTTAATTCTTCTATACAATTTTGGACGAAGCATTGACATCTC
AGTTAGTGACTCAACACAGAAGGACATAATTTTAGTACCTGTGGCTTTAC
TGCTGATGGTTATATTCTGCGGGCTGTCATTAGCCCGATTCAGGAACCGA
ATACTTGGCCATTTCAATTTAGCACTTGCTGGTGTTCTAATGTTATTCTT
AGCAATCGCTTCTGCGTTTTGTTTTATCATGCTTATCGGAGCACCGTACA
TCGCATTCGCTGGAGTGCTACCTTTCCTTGTTCTCGGGGTTGGTATCGAC
GATATATTTATTATCATCGATTCCGTCGATCGCCAACATCCATCAATCAA
ATCGAACACCAGAATTGCCAAAGCTTTGGGTGAAGTTTGCGCCTCTATAA
CAATGACTACTTTAACGGATCTTGTAGCTTTTTTTGTTTCCATGGTGACT
GATTTCCCAGCAATCCGATATTTTTGCATGTATGCAGCATTTAGTATCAC
TTTCTGCTACATCTTGGTTATCACCGTGTTTGTGGCTTTGTTGTCATTTG
ACGTGAAAAGGATTGAGGCGGGACAGTTCGATGTCATTCCATGTGTTGCC
AATAATAAAGAAACGACTGAGGAGGTCTGGGAAGAAGCAGGTGAATCCAT
GATTAACAAGGTATGGAACTATCTTTTTATATCTGATATTTTTTTTCTTT
ATAATATAGGTTACACGGTACACTAACGAACAAATAAGACGAAACACTAC
TGACAAAAAATAATGTCTGATATACCACTGTTTCAAAACACCTATGGGTT
TTCTCGTATCAGGGCTACAGTTTTCGATTCCGGCAAGTTTTCAGGTCAGA
AGCACTCACAGAAAAAATGAAAATATGATGATAAGTTTGACTACATCTTT
GGCTGAGCAAATAAAAACTTATGTTCAGATTATCTTTTGTTAATTAAGTT
TTTAACCAGAGAAAGATTTCACTTTAGGCAAAAATAAAAAATGTAGTGTT
TCCGGAAACCGGTCAGGTGAAAAAATATAATTTTCTGATCCGGTCGCAGA
CTTCGTTAGTAGTTGATACATTAGTATTCAGGGCTTGCTTCATACTGTGT
GTACATAAAAGTTATCTTTAAAGTTCTATTTCAATGATCTTAATTTATCA
AAAATAGCAACAACAAAAAATTTTCCGGCCGGCCGCATGAGTGCTTTTTC
CTTCACCCGCATTCCGGAAACACTACATTTTTTTATTTTTTTACATTTTC
GCCTTACATGTAGAAATAAACTCAAACGAAAAATCATATAAAAGTGTAAC
GCTATTCTACTTTTTCTCAATTCCAGCTGATCACGAAATACGCAGAAGTA
TTGATGCTGAAACCCATCAAAGCCATTGTCATCATCATTTCAATTGGGAT
GACTGCATTCGGAATCTACGGTGCAATCAATGTTGACCAAAGCTTCAATC
AATTAGTGTTGGGTCTTAAAGGATCAGCATATGTCAAATACTTCGGTTAT
TTTGAAACTGGTTTCCCCAGTGGAATCCCAGTTAATGTAGTTTTAGATGC
ACCTTTGAACTACACAGATTCATCTTTACAGCAACAGTATAGCAATTTGA
GTCAGATTGCGATTGATAACAATTATATGGAATCACAAACGTTTAACTGG
ATGCGAGATCTCCTCAGTTGGAGTAAAAACGAAAATATCACAGCTTCAGG
CCGTCATTTTTATCCATCCTTATATCTCTTCTTGCAAGAGAACCAACATT
ATTTAGTTGATATCAAATTTCATAAAAATTGGTTACAAGATATGTTAGAA
TGGTCAGTCGTACGGCAAAAGTTGGTCACTGTCGATAATTTCTACCAGAA
TTTAGAACAGTTTCTAATGGAGACTCCACAGATAAGCGCTTATATGAAGT
ATAATTTCACAACAGACTCGTTTTTATTAAGATCCAATACGAAAGAGACT
TTCAAAACCTGTGATGGTGAATGCTTTTTAATCAAAGCATCAAGGTTCAT
CATCCTTACCAAAGCTAATCATTTCTCCATCTATCGAAGAGACGCTATGT
TGTCACTACGTGAAGATTTGAGAACGAAAACAGATTTACCGGTATACGGT
GTTTCATATAATTACATATACGTGGAACAGTTTGTGGTTATTCTACCAGA
TACTATACGTAATCTGGCTATTTGTGCATCCGCCATTTTGTTGATCACAC
TACCCTATTTAGTAGATCCGAAAGTGACCTTTTTTGTTTTTTCGGGATTT
GTATGTCTTATGTTCGAGCTGTTTGGCGTCATGTATTTATGGGACGTTTC
ACTGAATGCGATTTCTATGATAATAATCGTCATGGGGATAGGGTTTTCAG
TTGATTATTCTGCTCACATTGCGCATGCGTTTGTCATTTGTAATGAGAAG
ACATCGGAGAGACGAGTCATCTATGCTATGAGAACGATGGGTGCAAGTGT
CACAATGGGAGGTAAGATGAATGAACTAACCCATTTCGGTAGAGTTTTTT
CCAGCCAGTGGGGGTAAAAATAATGGACTGAAACTCAGTGATATTGATAG
ACTCTCATGCTTTTTTTTATTCAAATTCCATTGTTCTAAAGCCAGTGGGA
TGGAAAAAATCACACAATTTTTTTCAGTTAGGAAAGAATTGTTGTATATA
ATTCTCCACTGGGGGCGATATTAAGGCGAAGTTGGTGTGTATTACAGCCC
TTAAATCTCGTTAAAAAATTCACTCACTTTAGTCTCTGAGGAATTGGTTC
CTGAAGGTCTGTATCGCATTCTTTATATGAATCTTAATTAGTTAATCAAC
TTGTTTTTTTGAATCTTAGGTATATCAACATTCGTGGGAGTGGTAACAAC
AGCTTTTGCACAAAGTGAACTTTTCAAAATCTTCTTCAAGATGGTTTTTG
GGATTGTTGTTCTTGGTTTGATTCATGGCTTGGTCTTCCTGCCCGTCTTT
CTCGCAGGTATTTTTCTCAATGATCTTTATCTGGTCTTAAAAATCTTTTT
TTTGCATTTAATGTACAAGAGTTTGGATCCCGTGTGGATAGACTAAGACT
ATGTTTAGATGTTATGGCTCGAAACGAGACTGTCGCAAAACACTTTGTGG
GTACCAAAAATTTGAAACAAAGCAAAGTGGATCGAAACAGCTATACTCCA
ATATTTTCGTTGAAACGGAACTGCTGCGTTTTCTTGCTCCTAAACGTTCC
AAAATCATAATATGAACACTTCCTATCTGAAACAAAATCCATACCGAAGC
GATGCTAAACCGGTCACCCGAAAGCCCCTTGCTTAATCTAAGCACTGAAG
TGTTGGAATTTTCCTTAAAAAACTTTGACTTGAAAAGAAAATTTCCAAAA
AATGCATTCTACTAAGAGCTAATGGTAATTATATTGGAACCCTGAATTTT
TTTCTTGAATGACAATATTTACCATTCGTTATCTTTTGTTTTTCAGTTTT
TTGCAACTATAATGTTCCAATGACCGTCGAAGTTGATGAAGAAGAAGAGA
ACGGAAATCTTTCGCCCAAGAAAAACAAAATGAATGGAGAAGAAGAACTT
TTGACTATGGAAGATATTCCTGATACTGATAAAATGTTATAGTACACTGT
CCATCATAGCATATACGTTTGTATAAGAACAAACTATATAAGAACATAAG
GCTTCGATGGTCAAAATGTTAAGAATAAGTTAAGATCATATTAAGGTCTT
GTGTACTCTAAAACACCCAATTTCTTAGGAAAAAATGAACAAAAATACTC
CAAAAATGTCATTTAAGAACGTTTTTAGGCCTAAAACTCAAAAAGTTAAG
AACATCCCAAGGCTTGAAAAATTTTGTGTATACTATTTCCTTAATTTTTC
TGAGGAAGAAGACTTGACTGGTTAAAAAATCACATTTAGCATTTTGTTTA
TGGTCTCGTTTTCATGGATTCATAAACATCAAGGTTTGGATAGATTCTAT
AATTCTTTTATTGTACATATTTTGAATTTTCAAATCAAATTGAGATTCTT
GTTTTGTAATTATCTTAAGAAAATATAGCCTTGGAGGAAGATTTTTTTGA
AAATGCATAGGCTGCTTTTGAGTACATTTAAATTTTGGGCCATCTTCGGA
GGTCCTATAAATTAACCCACAATCATGGCCAAAATTAATGTAATTCGTCA
CTTTTTTGGTACGAATTCAGTCATTTTATTTTCCTATTTTCTTATTGCAT
TAATCTTCAGGTAGCTCCATTCCGTATGTAGCTTACTGTTTTTACTACCT
TAAGGGAACTAATTTTGGCGGGAACTAATTTTGACGGGAAGCAAATATCC
TAAAAAAATTTAATTTTGGCGGGAACTTATTTTGGTGAATAGTGAATTTT
TTTAATTTAGGCGGGAACTGTTTTTGGCGAATGACAGCATAAATCTGTTC
TATTTTGCCTTATTTGAGCAATTTTGATGAATTTCAGGGGTTATTTAGGC
AAGGAAACAAAAAATTTACTTTTGGCGGAAACTTATTTTGGCGAGTGAGC
AAAATATTTAATTTTGGCTAGAACTAATTTTGGCAAATTTCGTCTAAATT
CGCCAAATCCGCCAAAATTAGTTCCTGCCAAAATAAGTCNCTGGAAGTTC
CATCCCGTAGATGTTATTTGGTAGACATGTGCTTTCACCATTTTTGGGGA
TAGTTCTGCAAGGGTTATCAGCGGTGCCAATCAATCTCCTTGGCAACGAA
TCGACCAGCGTTGCCATTATCACCATGGTTACCAAGAGGGTGAGAATATT
CTTTTGTGTTGAGCTTCTTGAATTCGTGCTCTTCATCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00036469-exon-sc0001464-1575043694:31237..31387 | TCONS_00036469-exon-sc0001464-1575043694:31237..31387 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1575043694:23150..23301 | TCONS_00036469-exon-sc0001464-1575043694:23150..23301 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1575043694:21478..22718 | TCONS_00036469-exon-sc0001464-1575043694:21478..22718 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1575043694:19677..20811 | TCONS_00036469-exon-sc0001464-1575043694:19677..20811 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1575043694:19181..19318 | TCONS_00036469-exon-sc0001464-1575043694:19181..19318 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1575043694:17347..18691 | TCONS_00036469-exon-sc0001464-1575043694:17347..18691 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:31237..31387 | TCONS_00036469-exon-sc0001464-1510915933:31237..31387 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:23150..23301 | TCONS_00036469-exon-sc0001464-1510915933:23150..23301 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:21478..22718 | TCONS_00036469-exon-sc0001464-1510915933:21478..22718 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:19677..20811 | TCONS_00036469-exon-sc0001464-1510915933:19677..20811 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:19181..19318 | TCONS_00036469-exon-sc0001464-1510915933:19181..19318 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1510915933:17347..18691 | TCONS_00036469-exon-sc0001464-1510915933:17347..18691 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:31237..31387 | TCONS_00036469-exon-sc0001464-1491911889:31237..31387 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:23150..23301 | TCONS_00036469-exon-sc0001464-1491911889:23150..23301 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:21478..22718 | TCONS_00036469-exon-sc0001464-1491911889:21478..22718 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:19677..20811 | TCONS_00036469-exon-sc0001464-1491911889:19677..20811 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:19181..19318 | TCONS_00036469-exon-sc0001464-1491911889:19181..19318 | Clytia hemisphaerica | exon |
| TCONS_00036469-exon-sc0001464-1491911889:17347..18691 | TCONS_00036469-exon-sc0001464-1491911889:17347..18691 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0001464 | supercontig | sc0001464:17347..31387 - |
Blast
BLAST of TCONS_00036469 vs. Swiss-Prot (Human)
Match: NPC1 (Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 4.707e-54 Identity = 240/965 (24.87%), Postives = 418/965 (43.32%), Query Frame = 3
Query: 222 FTNLGYIITKRPNLTIILGVLISLALIGGFARYNLIKRAEDLYLPKNSEASKDLDRVEENFPMSFKSESFIIR------------PKDANAPL---LTEEIFKEALEIHHEIMNIPGLTDVCIMNERLNTCAV-LSPLEFFNFNIS--NIQNVSQRLHQVLNDSKVLSSDGRQAYTNFPYYFSYFETTLTTQGMQIVRADALKTDYFVKDPSSKGIYGK-------LESFEDK----------------YVDIMSRKER-------------ELDNKGLILLYNFGRSIDISVSDSTQKDIILVPVALLLMVIFCGLSLARFRN--RIL--GHFNLALAGVLMLFLAIASAFCFIMLIGAPY-IAFAGVLPFLVLGVGXXXXXXXXXSVDRQHPSIKSNT---RIAKALGEVCASITMTTLTDLVAFFVSMVTDFPAIRYFCMYAAFSITFCYILVITVFVALLSFDVKRIEAGQFDVIPCVANNKXXXXXXXXXXXXSMINKLITKYAEVLMLKPXXXXXXXXXXGMTAFGIYGAINVDQSFNQLVLGLKGSAYVKYFGYFETGFPSGIPVNVVLDAPLNYTDXXXXXXXXXXXXIAIDNNYMESQTFNWMRDLLSWSKNENITASGRHFYPSLYLFLQENQHYLVDIKFHKNWLQDMLEWSVVRQKLVTVDNFYQNLEQFL-------------------METPQISAYMKY--NFTTDSFLLRSNT------KETFKTCDGECFLIKASRFIILTKANHFSIYRRDAMLSLREDLRTKTD-LPVYGVSYN-------YIYVEQFVVILPDTIRNLAICASAILLITLPYLVDPKVTFFVFSGFVCL-MFELFGVMYLWDVSLNAISMIIIVMGIGFSVDYSAHIAHAFVICNEKTSERRVIYAMRTMGASVTMG-GISTFVGVVTTAFAQSELFKIF-FKMVFGIVVLGLIHGLVFLPVFLA 2816
FT G + P I ++ A G + DL+ +S+A + + +++F F++E IIR P A+ P L +I + L++ I NI D NE + + L+PL +N N + ++ N Q H VL+ K D Y ++ +F Y VRA A D + G +G L ++D+ Y + + +R N L + + RSI+ ++ + D+ V ++ +M ++ L+L ++ R+L +L +AG+L++ ++A + IG P + V+PFLVL VG+D+IFI++ + R ++ T ++ + LGEV S+ +++ ++ VAFF+ ++ PA+ F ++A ++ ++L IT FV+LL D+KR E + D+ CV ++ T E+ + Y+ +L+ ++ IVI I +G+ +F I VD +Q + S V YF +G PV VL+ +YT S Q + +N+ + Q FN ++ +N T G F PS +W+ D +W + VDN +QF + PQ +M++ F +D+ + G + A+ F+ S DA+ R T+ + + G +Y Y++ EQ++ I+ DTI NL + AI L+T+ L + + + + + +FGVM+LW +SLNA+S++ +VM G SV++ +HI AF + + + R A+ MG+SV G ++ F G+V AFA+S++F+IF F+M +V+LG HGL+FLPV L+
Sbjct: 339 FTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYD----NETVTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKK---GDDFFVYADYHTHFLY-----------CVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYKNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDE-RLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCVRGAEDGTSVQASES--CLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGG--MGCNNDSLVQQIFNA-------AQLDNYTRIG--FAPS-------------------SWIDDYFDWVKPQSSCCRVDNI---TDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSMKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLS 1249
The following BLAST results are available for this feature:
|