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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036419 ID=TCONS_00036419|Name=TCONS_00036419|organism=Clytia hemisphaerica|type=transcript|length=953bp
ATAGAATTGAATCTGAAGAAGTCGAACCTTGATACTGAGATTGCTAACAA
GAACAAGGTCGTTGAACGGAGACAAACGGAAGTGAACAATAAACAGAATG
ATCTCAACAAAGCTGAAAAGGACTATCAAGATGCAAAAAATGATAGGGAA
AAAGCTGAGAGAGCACAAAGAGATATTAATATAGTTATGGGTATAGTTGC
CTTCGGCTTAACTCCAACTTTAGCAGCAGCAGTAACTGTTATGGAAATGA
ACGAACACGTGAAAAGTATGGAAAGTAAGAGAAGCCATCATCAACACGAA
TACAATTCAGTTCTTGCAACCCTTACAAATGCCCAGAAAGATTTACAAGC
TTCACAACAAGAAGCCACAGCACTGGAAACTTCTTTAAAAGCAAAACAAC
AAGAAATCAAAACACATgaagagaaaatttcaaatcatctttcgaaaatg
caAACATTACAAGAAGAGAAGAAATTAACACAAATTGAAGATGTTAATTT
CAATTCTGTATACCAATCTATCAAggtatgtaatagttatcgcacggTAC
AGAGaacaatatgggatatatttttcgagttcagatttttGTCATAttat
agtccgtataaaaaaccctggtttGGAAGCCTTtcgtttctttccattgt
ttcttactcgaacttgcgttgagaaattagtttgttttgctcacttattg
atcatgtgattaaatctaaACCAATCCAAAAAGgaatacttggtaacgtg
atcaaaaactgagcagatcaattttcatcttttgataataacaaaggaaa
aagctaacaaaaagttaaaacaataagcttccagatcAGGGTTTTTATCA
GGACTATGGTcatatttagaaaaaatatagaaaactctgaacTTTTGCCT
CGCCATTTTTATctcttctttgttttcttctgtattttggtgaaatcaac
atc Run BLAST on NCBI protein sequence of TCONS_00036419-protein >TCONS_00036419-protein ID=TCONS_00036419-protein|Name=TCONS_00036419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
IELNLKKSNLDTEIANKNKVVERRQTEVNNKQNDLNKAEKDYQDAKNDRE
KAERAQRDINIVMGIVAFGLTPTLAAAVTVMEMNEHVKSMESKRSHHQHE
YNSVLATLTNAQKDLQASQQEATALETSLKAKQQEIKTHEEKISNHLSKM
QTLQEEKKLTQIEDVNFNSVYQSIKVCNSYRTVQRTIWDIFFEFRFLSYY
SPYKKPWFGSLSFLSIVSYSNLR Run BLAST on NCBI transcript from alignment at sc0001458:32304..34095- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036419 ID=TCONS_00036419|Name=TCONS_00036419|organism=Clytia hemisphaerica|type=transcript|length=1792bp|location=Sequence derived from alignment at sc0001458:32304..34095- (Clytia hemisphaerica)
ATAGAATTGAATCTGAAGAAGTCGAACCTTGATACTGAGATTGCTAACAA
GAACAAGGTCGTTGAACGGAGACAAACGGAAGTGAACAATAAACAGAATG
ATCTCAACAAAGCTGAAAAGGACTATCAAGATGCAAAAAATGATAGGGAA
AAAGCTGAGAGAGCACAAAGAGATATTAATATAGTTATGGGTATAGTTGC
CTTCGGCTTAACTCCAACTTTAGCAGCAGCAGGTAATTACCTTTTTCTGA
ATCCTATAACCTTTTAAAAATTAATCAGATAGTTTAAGAAAATTATATTC
TTTTAGTTGGAAAAACTTCTGAATGAAAGAGGATTTTAAATTGAACAATG
ACAAATGTTTCTTGAATCCGATAAAAACGGTTGATCTTTAACTTTTAAAA
AGCCAAAAATATGCTAAAATTTGAACTTTATTACGATTTCCAAGTTTTAT
ATTTTCTCAAATTTTTTAAGCATTTTTCGGGAGCATAAACTTTTGAGAAT
CACTACATTGACTTTAAATTATATCTTTCGAAAATTCACAAGGTTAAAAT
ACATTACTTGAAGTTTCATGCTTATCGCAATCATCAGATGTAAAGAGTAT
TGTAAAGAGTAATGTATTTTTAACCTTGTGAATTTTCGAAAGATATAATT
TATGATTCGCTCTATGAAGTATTGAGCACTATTTTAATGGTTGCCCAACC
AAGATGTTACATTAACTTTAATATAAAGATAAATGAAAGCAGCAACATAT
TGATTTTTTCTCAATCAATTCTTTCAGACGTGTATATATTTTCGCGGGTA
CTAGATTTTCGTGTAGCTTTTAGGCAAAATCTCGCGAAATTTAGTACTGT
TTATATTATTTTCAAAAACACCAAATTGCAAAATTAAATACTCTCGGGTT
TATTTAATAGCGAAAGCAACGTTTTTTGGAAAAAACTTTGCGATTCGGGA
AAATTTAGTACCTGCAATTAAGGTAACCATGGAAGTTTTTATGATGACCA
TGAAACATCTCAAAAGGAATATAAAAAACTTATCACAACATTTTTTTTTC
CTTCTCAACCTGCCGTTGCAGTAACTGTTATGGAAATGAACGAACACGTG
AAAAGTATGGAAAGTAAGAGAAGCCATCATCAACACGAATACAATTCAGT
TCTTGCAACCCTTACAAATGCCCAGAAAGATTTACAAGCTTCACAACAAG
AAGCCACAGCACTGGAAACTTCTTTAAAAGCAAAACAACAAGAAATCAAA
ACACATGAAGAGAAAATTTCAAATCATCTTTCGAAAATGCAAACATTACA
AGAAGAGAAGAAATTAACACAAATTGAAGATGTTAATTTCAATTCTGTAT
ACCAATCTATCAAGGTATGTAATAGTTATCGCACGGTACAGAGAACAATA
TGGGATATATTTTTCGAGTTCAGATTTTTGTCATATTATAGTCCGTATAA
AAAACCCTGGTTTGGAAGCCTTTCGTTTCTTTCCATTGTTTCTTACTCGA
ACTTGCGTTGAGAAATTAGTTTGTTTTGCTCACTTATTGATCATGTGATT
AAATCTAAACCAATCCAAAAAGGAATACTTGGTAACGTGATCAAAAACTG
AGCAGATCAATTTTCATCTTTTGATAATAACAAAGGAAAAAGCTAACAAA
AAGTTAAAACAATAAGCTTCCAGATCAGGGTTTTTATCAGGACTATGGTC
ATATTTAGAAAAAATATAGAAAACTCTGAACTTTTGCCTCGCCATTTTTA
TCTCTTCTTTGTTTTCTTCTGTATTTTGGTGAAATCAACATC Coding sequence (CDS) from alignment at sc0001458:32304..34095- >TCONS_00036419 ID=TCONS_00036419|Name=TCONS_00036419|organism=Clytia hemisphaerica|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0001458:32304..34095- (Clytia hemisphaerica)
TAACTGTTATGGAAATGAACGAACACGTGAAAAGTATGGAAAGTAAGAGA
AGCCATCATCAACACGAATACAATTCAGTTCTTGCAACCCTTACAAATGC
CCAGAAAGATTTACAAGCTTCACAACAAGAAGCCACAGCACTGGAAACTT
CTTTAAAAGCAAAACAACAAGAAATCAAAACACATGAAGAGAAAATTTCA
AATCATCTTTCGAAAATGCAAACATTACAAGAAGAGAAGAAATTAACACA
AATTGAAGATGTTAATTTCAATTCTGTATACCAATCTATCAAGGTATGTA
ATAGTTATCGCACGGTACAGAGAACAATATGGGATATATTTTTCGAGTTC
AGATTTTTGTCATATTATAGTCCGTATAAAAAACCCTGGTTTGGAAGCCT
TTCGTTTCTTTCCATTGTTTCTTACTCGAACTTGCGTTGAATAGAATTGA
ATCTGAAGAAGTCGAACCTTGATACTGAGATTGCTAACAAGAACAAGGTC
GTTGAACGGAGACAAACGGAAGTGAACAATAAACAGAATGATCTCAACAA
AGCTGAAAAGGACTATCAAGATGCAAAAAATGATAGGGAAAAAGCTGAGA
GAGCACAAAGAGATATTAATATAGTTATGGGTATAGTTGCCTTCGGCTTA
ACTCCAACTTTAGCAGCAGCAGTAACTGTTATGGAAATGAACGAACACGT
GAAAAGTATGGAAAGTAAGAGAAGCCATCATCAACACGAATACAATTCAG
TTCTTGCAACCCTTACAAATGCCCAGAAAGATTTACAAGCTTCACAACAA
GAAGCCACAGCACTGGAAACTTCTTTAAAAGCAAAACAACAAGAAATCAA
AACACATGAAGAGAAAATTTCAAATCATCTTTCGAAAATGCAAACATTAC
AAGAAGAGAAGAAATTAACACAAATTGAAGATGTTAATTTCAATTCTGTA
TACCAATCTATCAAGGTATGTAATAGTTATCGCACGGTACAGAGAACAAT
ATGGGATATATTTTTCGAGTTCAGATTTTTGTCATATTATAGTCCGTATA
AAAAACCCTGGTTTGGAAGCCTTTCGTTTCTTTCCATTGTTTCTTACTCG
AACTTGCGTTGAATAGAATTGAATCTGAAGAAGTCGAACCTTGATACTGA
GATTGCTAACAAGAACAAGGTCGTTGAACGGAGACAAACGGAAGTGAACA
ATAAACAGAATGATCTCAACAAAGCTGAAAAGGACTATCAAGATGCAAAA
AATGATAGGGAAAAAGCTGAGAGAGCACAAAGAGATATTAATATAGTTAT
GGGTATAGTTGCCTTCGGCTTAACTCCAACTTTAGCAGCAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036419-exon-sc0001458-1575043694:33864..34095 | TCONS_00036419-exon-sc0001458-1575043694:33864..34095 | Clytia hemisphaerica | exon |
| TCONS_00036419-exon-sc0001458-1575043694:32304..33024 | TCONS_00036419-exon-sc0001458-1575043694:32304..33024 | Clytia hemisphaerica | exon |
| TCONS_00036419-exon-sc0001458-1510915933:33864..34095 | TCONS_00036419-exon-sc0001458-1510915933:33864..34095 | Clytia hemisphaerica | exon |
| TCONS_00036419-exon-sc0001458-1510915933:32304..33024 | TCONS_00036419-exon-sc0001458-1510915933:32304..33024 | Clytia hemisphaerica | exon |
| TCONS_00036419-exon-sc0001458-1491911889:33864..34095 | TCONS_00036419-exon-sc0001458-1491911889:33864..34095 | Clytia hemisphaerica | exon |
| TCONS_00036419-exon-sc0001458-1491911889:32304..33024 | TCONS_00036419-exon-sc0001458-1491911889:32304..33024 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001458 | supercontig | sc0001458:32304..34095 - |
Blast
The following BLAST results are available for this feature:
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