TCONS_00036401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036401
Unique NameTCONS_00036401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1492

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036401 ID=TCONS_00036401|Name=TCONS_00036401|organism=Clytia hemisphaerica|type=transcript|length=1492bp
ACGAAGGTGACGACAATTCCAGTACTTCGACTGACTCACAATCAGTTTCG
GCTGGAAACAAAGattttcctgGACACTCAACTGAAGAGGAGCTAGTTTT
TAGTGATTTGCTTCATGAAGAACCTATGTCTGACAACTTGTTGAAAAAAC
TCCATAGACGACTATCCAAATTTACTAAAGACGATTTTGATAAAGAATGG
CCAATTATCAAAAATGCTTTGGTCAAGATAGCTGAAGGAAAAACACAAAG
TTATAGACATGATGTTTACCATCGTAAAAGAACACATAATTTTTCTGATG
GAAAACAAGTTCTAAAGCATCATCTTGGTTACTTCCATTTCGTATCGCTT
AATGATGAGCTCCGGGAGCACATTCCCATAGTCATGAGGAATCACTTTCC
TGATACGCAACTCGATTATGTCATGGATGTGTTAGAGCCGGCTGCGTACA
AGTTCTTCCTGGTTTCTAAATGCGATGTGTCGTGCGAGGAAGTCCAATAT
TATGTGGAAAACTATGCCTCAAATGTGAGTGTATTCGACGAGGCCGACAC
TGTAACGGAAGATATTGATGACGAAACAGCTGGAAATCATGTTCATAGAC
CAAGTGACGCCAAAGAGTTGATCAAAAAGAAAGCTTTGAAAGACCTTAAA
GAATTGGAGGCGGTCATCGACGGAAAAGAAAGGAAAGCCGACTGGCATCA
AACTAAAGTCAGTCGCTCGTTGACACTAAAGTTACTGTACATATCCCgat
caatgatacaaaatatGAAGTTTATTTCCTCCCAATGGGGTTCCCTTCTT
GACGAACATCGTATAGGATTTGATGTGAAGATGGCCGCACAGGATGCTTA
TCAAATTGTGCGCTATATGATCAAGCGATACAAGAAAGAAGATACAACCG
ATAATCACAGGGCATTCAATAGAATGTTGGACGAAGCACGCATGTTTTAT
CGCCGCTCAAGGGAGCTGCAAAACAAAATTCATtcataaacgtttttttt
tcccTGTCAAATCCATGCATCAGATTTTATCTTATTATCCCACGCGCGTA
AATAAGagcatttgattggcttctttactgtccaatattttcgaatatat
agctaCCGTGGAGGGTATATATTTGCAAAATTGACGTCACTTAACTGTTT
TGTTGACAATTTAGcgtcttctttttgacgttacgtcacaaaatagaAAC
AAGAAACCAATCAAATGCTCTTATTTACACGCATGGGATAATAAATGTAA
ATAGTATGTAAATATCTCACATCTTATTTTCACATATTGCTGTATTCCAA
AAAGTAGATTCTGTAGTCTCGAAATTTGAAGTCATCTTCTGTTCAAACAC
CACTTTGAGTTGGCTTTTGCTGGTGGAAATTCCAGCAGACTTTTGTGTTG
CCTTGCACCTTGACATAACTAAATAGTTGAACTGGGAAATTATGTCTTTT
GTAGTTTAAACATATACACATTAACAACCTCGTACTTTTGtg
Run BLAST on NCBI

protein sequence of TCONS_00036401-protein

>TCONS_00036401-protein ID=TCONS_00036401-protein|Name=TCONS_00036401-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
EGDDNSSTSTDSQSVSAGNKDFPGHSTEEELVFSDLLHEEPMSDNLLKKL
HRRLSKFTKDDFDKEWPIIKNALVKIAEGKTQSYRHDVYHRKRTHNFSDG
KQVLKHHLGYFHFVSLNDELREHIPIVMRNHFPDTQLDYVMDVLEPAAYK
FFLVSKCDVSCEEVQYYVENYASNVSVFDEADTVTEDIDDETAGNHVHRP
SDAKELIKKKALKDLKELEAVIDGKERKADWHQTKVSRSLTLKLLYISRS
MIQNMKFISSQWGSLLDEHRIGFDVKMAAQDAYQIVRYMIKRYKKEDTTD
NHRAFNRMLDEARMFYRRSRELQNKIHS
Run BLAST on NCBI

transcript from alignment at sc0001454:39717..43885-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036401 ID=TCONS_00036401|Name=TCONS_00036401|organism=Clytia hemisphaerica|type=transcript|length=4169bp|location=Sequence derived from alignment at sc0001454:39717..43885- (Clytia hemisphaerica)
ACGAAGGTGACGACAATTCCAGTACTTCGACTGACTCACAATCAGTTTCG
GCTGGAAACAAAGGTAATCATTTATGATGCATTCTTATTACACTATAAGA
TTGTTTGTAAATGTTCGAATTTGGCAACTCCACAATTTGTCTTTCGCAAT
ACATATAACATTTTGTTACTTCTTTTTTCGACAAGTTTAAAATTAACTTT
TCAGCACTGTTTCTCTATTTTTCTGACAGTTAATAACATAAACTTCTGGC
TTCTTTTTTACTTTTGATTTCAAGGTGCGCAAATTGTCAAAAGTAGTGAT
AAGTATGAGGTTTTAGGATTGAAGATTTAACGTTAAATCTTCAATCCTAA
AAACTCATACTAATCACTACTTTTGACAAATTGCGTACCTTGAAAATAAA
AGTAAAAAAGTCTTCAATCCTAAAATCTATTACTAATAACTACTTTTAAC
AATTTGCGTACCTTGAAATCAAAAGTAAAAAAGGTGACATAGATATTGTG
ACAACATTCTTTTCATCTTGAAAACAACGCCGCCTTTTTGTTTTTAGTAC
ATCTCCTTTTCACATTTTATAATTAAAGTTGTCTTTTTTCAGATTTTCCT
GGACACTCAACTGAAGAGGAGCTAGTTTTTAGTGATTTGCTTCATGGTAA
GTACTTAGAATACTTTGGGCGTACAATCTTTTGCGAGTACATAGGATTAC
TGCAAAAATTATCTGAAAAGTAGGATATCTGTAAAATTTCGTCAAAATTG
AAACTAGTAATTATGGCATTTTAGGCCTTAAGAGTATCATTGAAGTCTAT
AAATTTTCATTTTAATCACTCTCTTCCCGAAAGTTCAATTCTATAGCTGT
AATCTTTTTTTTCATTTTAACTCACATTTTGAAACATTTATTATTTAACT
ATTATAGAAGAACCTATGTCTGACAACTTGTTGAAAAAACTCCATAGACG
ACTATCCAAATTTACTAAAGACGATTTTGATAAAGAATGGCCAATTATCA
AAAATGCTTTGGTCAAGATAGCTGAAGGAAAAACACAAAGTTATAGACAT
GATGTTTACCATCGTAAAAGAACACATAATTTTTCTGATGGAAAACAAGT
TCTAAAGCATCATCTTGGTTACTTCCATTTCGGTACGTTCATCTTTTATT
ACTCATTCAGCCTTTTGATGCCTCTATTTTGAAGAGAATAGAAACGTGAA
ATTGTCTATCTATCCTTATATCTAAGATGCATAAAACATAAATATTCATC
ATCACTTCGTAGACGTACTTGGTACTTTTTGTTTTGATTTTTTCTATAAT
TAGACAAATTGAAGATGTTTCACTCAAAAGTGCCAGTCAATGCTGGAAAG
AAAACTTAAAGACAGTTTGATTCTGAATTTAAAAATTCGACGTTTTATGT
TTTTGCCTCATTTTATTTAGTATCGCTTAATGATGAGCTCCGGGAGCACA
TTCCCATAGTCATGAGGAATCACTTTCCTGATACGCAACTCGATTATGTC
ATGGATGTGTTAGAGCCGGCTGCGTACAAGTTCTTCCTGGTTTCTAAATG
CGATGTGTCGTGCGAGGAAGTCCAATATTATGTGGAAAACTATGGTAAGT
ATATTTAAGCTTTTACCCTTTTATTGCGCTGATATATACAAATTAGTTCT
ATTTTAGGCCGTTTTTACACTGGGGTTGTTTGTAATAAATAAAATGTTTT
TTATTACATTACAAAGTGTCATTCAAGTTTTTCAAATGATTTATGTAGTC
AATATATTACACCCAGACTTATTAATATTCACACTATTCTTTCGCGAGAA
AGTGCTAATAACCTGCCTCTAACACAAAAGGGTTGTTCCTTTATTTAGCC
TCAAATGTGAGTGTATTCGACGAGGCCGACACTGTAACGGAAGATATTGA
TGACGAAACAGCTGGAAATCATGTTCATAGTAAGAGTTCTATTGATTTTT
ACCTATATTTGTCTATTCATCATTGGATAGATCTTTTTGTTTAACTTCAC
TCCTTCCTTCTTTCGAGGGTCTTCTACTTATTCTTATTATCAATAAATTT
GTGTTTGTAAACTTGTAATCTTAAGTAACTAATTTCAATAACATTTATTT
TTCCAACCAGTGGCGTTGTGGGAAAATTTTTCTGGAGGGGCCAAAGTCAA
TTTTTTAGAAATGGCACCCCCAATTTTCCAAAGTGGCGCCCCCACCCATC
AGTTGCTGAACTCTTACCATTTACTAATTCGTTTGCCTAGGCATAATGAG
GAAAGAAATATTTAGTGGATAAAAGTAGATATATCTTTGATAAATGGAAA
GGGGAAAAACATGTCCCACCATGGTTGGGGCCGACTAGAAAATTTTTGAA
AATCCACTGCCAAGATGAATCACTAAACCAACCCTGAATCACTAAATAAA
AATAGACAAATTTCATACNTCGACTGCCAAGATACCCTGAATCACTAAAT
AAAAATAGACAAATTTCATATTGGCTAGAGTGAAAAGAAACTTAAAGAAA
CAATGTGCAAATGCGAGCGAAGCGAGCGAAAAAATTTATGTTTCGCGATT
TCAATATTGTTGTCAGCAAATTGATATTGGGGCGCAGTTAGATTTTTATT
CAATAATGCTATTGTACACAAAAAAACTTTTAAATTAGCTATATTACAAA
GAAGTTACCAATTAACTTTATTGCGAACAAAGCGAGCGAGAAAAAAAATT
GCAAGTAATCTCAGTAAAATTGGTCCTGGGCGCAATTTCAGGAGTATAAA
GTATGATTTTTAAGATTGGGGCGTTTAAAAAATCTTTTGGCGCCCCTTGC
TCTTCGGCGCCCCTTCAGAAAAGCTCCGCTGGGGGGGCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGCCCCCCCCGCCCCCCCCTGCCACA
ACGCCACTGTTTCCAACACTTGTAAAACAATAAAAAAATTATCCATCCTA
GGACCAAGTGACGCCAAAGAGTTGATCAAAAAGAAAGCTTGTAAGTGAAG
GGTTTCACAGTCTTAAATTCATTTTCTTTTCATCAACCCATTTATCTGCC
CAGGATGCCCACATTTTCATTGTTGACTATGTATGAAGCTGTTCACATAC
AGAAAAAAGGATTTTCTGATTCTTTTATGAATACTTTTTTTGACAATAGT
CAAGATAATGAAAAAGTTTTAATAAACAAATTCAAATAAAAGTTTTTCTT
TAAACCCATTTAGTGAAAGACCTTAAAGAATTGGAGGCGGTCATCGACGG
AAAAGAAAGGAAAGCCGACTGGCATCAAACTAAAGTCAGTCGCTCGTTGA
CACTAAAGTTACTGTACATATCCCGATCAATGATACAAAATATGAAGTTT
ATTTCCTCCCAATGGGGTTCCCTTCTTGACGAACATCGTATAGGATTTGA
TGTGAAGATGGCCGCACAGGATGCTTATCAAATTGTGCGCTATATGATCA
AGCGATACAAGAAAGAAGATACAACCGATAATCACAGGGCATTCAATAGA
ATGTTGGACGAAGCACGCATGTTTTATCGCCGCTCAAGGGAGCTGCAAAA
CAAAATTCATTCATAAACGTTTTTTTTTCCCTGTCAAATCCATGCATCAG
ATTTTATCTTATTATCCCACGCGCGTAAATAAGAGCATTTGATTGGCTTC
TTTACTGTCCAATATTTTCGAATATATAGCTACCGTGGAGGGTATATATT
TGCAAAATTGACGTCACTTAACTGTTTTGTTGACAATTTAGCGTCTTCTT
TTTGACGTTACGTCACAAAATAGAAACAAGAAACCAATCAAATGCTCTTA
TTTACACGCATGGGATAATAAATGTAAATAGTATGTAAATATCTCACATC
TTATTTTCACATATTGCTGTATTCCAAAAAGTAGATTCTGTAGTCTCGAA
ATTTGAAGTCATCTTCTGTTCAAACACCACTTTGAGTTGGCTTTTGCTGG
TGGAAATTCCAGCAGACTTTTGTGTTGCCTTGCACCTTGACATAACTAAA
TAGTTGAACTGGGAAATTATGTCTTTTGTAGTTTAAACATATACACATTA
ACAACCTCGTACTTTTGTG

Coding sequence (CDS) from alignment at sc0001454:39717..43885-

>TCONS_00036401 ID=TCONS_00036401|Name=TCONS_00036401|organism=Clytia hemisphaerica|type=CDS|length=6909bp|location=Sequence derived from alignment at sc0001454:39717..43885- (Clytia hemisphaerica)
TGAAAGACCTTAAAGAATTGGAGGCGGTCATCGACGGAAAAGAAAGGAAA
GCCGACTGGCATCAAACTAAAGTCAGTCGCTCGTTGACACTAAAGTTACT
GTACATATCCCGATCAATGATACAAAATATGAAGTTTATTTCCTCCCAAT
GGGGTTCCCTTCTTGACGAACATCGTATAGGATTTGATGTGAAGATGGCC
GCACAGGATGCTTATCAAATTGTGCGCTATATGATCAAGCGATACAAGAA
AGAAGATACAACCGATAATCACAGGGCATTCAATAGAATGTTGGACGAAG
CACGCATGTTTTATCGCCGCTCAAGGGAGCTGCAAAACAAAATTCATTCA
TAAGACCAAGTGACGCCAAAGAGTTGATCAAAAAGAAAGCTTCCTCAAAT
GTGAGTGTATTCGACGAGGCCGACACTGTAACGGAAGATATTGATGACGA
AACAGCTGGAAATCATGTTCATATATCGCTTAATGATGAGCTCCGGGAGC
ACATTCCCATAGTCATGAGGAATCACTTTCCTGATACGCAACTCGATTAT
GTCATGGATGTGTTAGAGCCGGCTGCGTACAAGTTCTTCCTGGTTTCTAA
ATGCGATGTGTCGTGCGAGGAAGTCCAATATTATGTGGAAAACTATGAAG
AACCTATGTCTGACAACTTGTTGAAAAAACTCCATAGACGACTATCCAAA
TTTACTAAAGACGATTTTGATAAAGAATGGCCAATTATCAAAAATGCTTT
GGTCAAGATAGCTGAAGGAAAAACACAAAGTTATAGACATGATGTTTACC
ATCGTAAAAGAACACATAATTTTTCTGATGGAAAACAAGTTCTAAAGCAT
CATCTTGGTTACTTCCATTTCGATTTTCCTGGACACTCAACTGAAGAGGA
GCTAGTTTTTAGTGATTTGCTTCATGGAAGGTGACGACAATTCCAGTACT
TCGACTGACTCACAATCAGTTTCGGCTGGAAACAAAGTGAAAGACCTTAA
AGAATTGGAGGCGGTCATCGACGGAAAAGAAAGGAAAGCCGACTGGCATC
AAACTAAAGTCAGTCGCTCGTTGACACTAAAGTTACTGTACATATCCCGA
TCAATGATACAAAATATGAAGTTTATTTCCTCCCAATGGGGTTCCCTTCT
TGACGAACATCGTATAGGATTTGATGTGAAGATGGCCGCACAGGATGCTT
ATCAAATTGTGCGCTATATGATCAAGCGATACAAGAAAGAAGATACAACC
GATAATCACAGGGCATTCAATAGAATGTTGGACGAAGCACGCATGTTTTA
TCGCCGCTCAAGGGAGCTGCAAAACAAAATTCATTCATAAGACCAAGTGA
CGCCAAAGAGTTGATCAAAAAGAAAGCTTCCTCAAATGTGAGTGTATTCG
ACGAGGCCGACACTGTAACGGAAGATATTGATGACGAAACAGCTGGAAAT
CATGTTCATATATCGCTTAATGATGAGCTCCGGGAGCACATTCCCATAGT
CATGAGGAATCACTTTCCTGATACGCAACTCGATTATGTCATGGATGTGT
TAGAGCCGGCTGCGTACAAGTTCTTCCTGGTTTCTAAATGCGATGTGTCG
TGCGAGGAAGTCCAATATTATGTGGAAAACTATGAAGAACCTATGTCTGA
CAACTTGTTGAAAAAACTCCATAGACGACTATCCAAATTTACTAAAGACG
ATTTTGATAAAGAATGGCCAATTATCAAAAATGCTTTGGTCAAGATAGCT
GAAGGAAAAACACAAAGTTATAGACATGATGTTTACCATCGTAAAAGAAC
ACATAATTTTTCTGATGGAAAACAAGTTCTAAAGCATCATCTTGGTTACT
TCCATTTCGATTTTCCTGGACACTCAACTGAAGAGGAGCTAGTTTTTAGT
GATTTGCTTCATGGAAGGTGACGACAATTCCAGTACTTCGACTGACTCAC
AATCAGTTTCGGCTGGAAACAAAGTGAAAGACCTTAAAGAATTGGAGGCG
GTCATCGACGGAAAAGAAAGGAAAGCCGACTGGCATCAAACTAAAGTCAG
TCGCTCGTTGACACTAAAGTTACTGTACATATCCCGATCAATGATACAAA
ATATGAAGTTTATTTCCTCCCAATGGGGTTCCCTTCTTGACGAACATCGT
ATAGGATTTGATGTGAAGATGGCCGCACAGGATGCTTATCAAATTGTGCG
CTATATGATCAAGCGATACAAGAAAGAAGATACAACCGATAATCACAGGG
CATTCAATAGAATGTTGGACGAAGCACGCATGTTTTATCGCCGCTCAAGG
GAGCTGCAAAACAAAATTCATTCATAAGACCAAGTGACGCCAAAGAGTTG
ATCAAAAAGAAAGCTTCCTCAAATGTGAGTGTATTCGACGAGGCCGACAC
TGTAACGGAAGATATTGATGACGAAACAGCTGGAAATCATGTTCATATAT
CGCTTAATGATGAGCTCCGGGAGCACATTCCCATAGTCATGAGGAATCAC
TTTCCTGATACGCAACTCGATTATGTCATGGATGTGTTAGAGCCGGCTGC
GTACAAGTTCTTCCTGGTTTCTAAATGCGATGTGTCGTGCGAGGAAGTCC
AATATTATGTGGAAAACTATGAAGAACCTATGTCTGACAACTTGTTGAAA
AAACTCCATAGACGACTATCCAAATTTACTAAAGACGATTTTGATAAAGA
ATGGCCAATTATCAAAAATGCTTTGGTCAAGATAGCTGAAGGAAAAACAC
AAAGTTATAGACATGATGTTTACCATCGTAAAAGAACACATAATTTTTCT
GATGGAAAACAAGTTCTAAAGCATCATCTTGGTTACTTCCATTTCGATTT
TCCTGGACACTCAACTGAAGAGGAGCTAGTTTTTAGTGATTTGCTTCATG
GAAGGTGACGACAATTCCAGTACTTCGACTGACTCACAATCAGTTTCGGC
TGGAAACAAAGTGAAAGACCTTAAAGAATTGGAGGCGGTCATCGACGGAA
AAGAAAGGAAAGCCGACTGGCATCAAACTAAAGTCAGTCGCTCGTTGACA
CTAAAGTTACTGTACATATCCCGATCAATGATACAAAATATGAAGTTTAT
TTCCTCCCAATGGGGTTCCCTTCTTGACGAACATCGTATAGGATTTGATG
TGAAGATGGCCGCACAGGATGCTTATCAAATTGTGCGCTATATGATCAAG
CGATACAAGAAAGAAGATACAACCGATAATCACAGGGCATTCAATAGAAT
GTTGGACGAAGCACGCATGTTTTATCGCCGCTCAAGGGAGCTGCAAAACA
AAATTCATTCATAAGACCAAGTGACGCCAAAGAGTTGATCAAAAAGAAAG
CTTCCTCAAATGTGAGTGTATTCGACGAGGCCGACACTGTAACGGAAGAT
ATTGATGACGAAACAGCTGGAAATCATGTTCATATATCGCTTAATGATGA
GCTCCGGGAGCACATTCCCATAGTCATGAGGAATCACTTTCCTGATACGC
AACTCGATTATGTCATGGATGTGTTAGAGCCGGCTGCGTACAAGTTCTTC
CTGGTTTCTAAATGCGATGTGTCGTGCGAGGAAGTCCAATATTATGTGGA
AAACTATGAAGAACCTATGTCTGACAACTTGTTGAAAAAACTCCATAGAC
GACTATCCAAATTTACTAAAGACGATTTTGATAAAGAATGGCCAATTATC
AAAAATGCTTTGGTCAAGATAGCTGAAGGAAAAACACAAAGTTATAGACA
TGATGTTTACCATCGTAAAAGAACACATAATTTTTCTGATGGAAAACAAG
TTCTAAAGCATCATCTTGGTTACTTCCATTTCGATTTTCCTGGACACTCA
ACTGAAGAGGAGCTAGTTTTTAGTGATTTGCTTCATGGAAGGTGACGACA
ATTCCAGTACTTCGACTGACTCACAATCAGTTTCGGCTGGAAACAAAGTG
AAAGACCTTAAAGAATTGGAGGCGGTCATCGACGGAAAAGAAAGGAAAGC
CGACTGGCATCAAACTAAAGTCAGTCGCTCGTTGACACTAAAGTTACTGT
ACATATCCCGATCAATGATACAAAATATGAAGTTTATTTCCTCCCAATGG
GGTTCCCTTCTTGACGAACATCGTATAGGATTTGATGTGAAGATGGCCGC
ACAGGATGCTTATCAAATTGTGCGCTATATGATCAAGCGATACAAGAAAG
AAGATACAACCGATAATCACAGGGCATTCAATAGAATGTTGGACGAAGCA
CGCATGTTTTATCGCCGCTCAAGGGAGCTGCAAAACAAAATTCATTCATA
AGACCAAGTGACGCCAAAGAGTTGATCAAAAAGAAAGCTTCCTCAAATGT
GAGTGTATTCGACGAGGCCGACACTGTAACGGAAGATATTGATGACGAAA
CAGCTGGAAATCATGTTCATATATCGCTTAATGATGAGCTCCGGGAGCAC
ATTCCCATAGTCATGAGGAATCACTTTCCTGATACGCAACTCGATTATGT
CATGGATGTGTTAGAGCCGGCTGCGTACAAGTTCTTCCTGGTTTCTAAAT
GCGATGTGTCGTGCGAGGAAGTCCAATATTATGTGGAAAACTATGAAGAA
CCTATGTCTGACAACTTGTTGAAAAAACTCCATAGACGACTATCCAAATT
TACTAAAGACGATTTTGATAAAGAATGGCCAATTATCAAAAATGCTTTGG
TCAAGATAGCTGAAGGAAAAACACAAAGTTATAGACATGATGTTTACCAT
CGTAAAAGAACACATAATTTTTCTGATGGAAAACAAGTTCTAAAGCATCA
TCTTGGTTACTTCCATTTCGATTTTCCTGGACACTCAACTGAAGAGGAGC
TAGTTTTTAGTGATTTGCTTCATGGAAGGTGACGACAATTCCAGTACTTC
GACTGACTCACAATCAGTTTCGGCTGGAAACAAAGTGAAAGACCTTAAAG
AATTGGAGGCGGTCATCGACGGAAAAGAAAGGAAAGCCGACTGGCATCAA
ACTAAAGTCAGTCGCTCGTTGACACTAAAGTTACTGTACATATCCCGATC
AATGATACAAAATATGAAGTTTATTTCCTCCCAATGGGGTTCCCTTCTTG
ACGAACATCGTATAGGATTTGATGTGAAGATGGCCGCACAGGATGCTTAT
CAAATTGTGCGCTATATGATCAAGCGATACAAGAAAGAAGATACAACCGA
TAATCACAGGGCATTCAATAGAATGTTGGACGAAGCACGCATGTTTTATC
GCCGCTCAAGGGAGCTGCAAAACAAAATTCATTCATAAGACCAAGTGACG
CCAAAGAGTTGATCAAAAAGAAAGCTTCCTCAAATGTGAGTGTATTCGAC
GAGGCCGACACTGTAACGGAAGATATTGATGACGAAACAGCTGGAAATCA
TGTTCATATATCGCTTAATGATGAGCTCCGGGAGCACATTCCCATAGTCA
TGAGGAATCACTTTCCTGATACGCAACTCGATTATGTCATGGATGTGTTA
GAGCCGGCTGCGTACAAGTTCTTCCTGGTTTCTAAATGCGATGTGTCGTG
CGAGGAAGTCCAATATTATGTGGAAAACTATGAAGAACCTATGTCTGACA
ACTTGTTGAAAAAACTCCATAGACGACTATCCAAATTTACTAAAGACGAT
TTTGATAAAGAATGGCCAATTATCAAAAATGCTTTGGTCAAGATAGCTGA
AGGAAAAACACAAAGTTATAGACATGATGTTTACCATCGTAAAAGAACAC
ATAATTTTTCTGATGGAAAACAAGTTCTAAAGCATCATCTTGGTTACTTC
CATTTCGATTTTCCTGGACACTCAACTGAAGAGGAGCTAGTTTTTAGTGA
TTTGCTTCATGGAAGGTGACGACAATTCCAGTACTTCGACTGACTCACAA
TCAGTTTCGGCTGGAAACAAAGTGAAAGACCTTAAAGAATTGGAGGCGGT
CATCGACGGAAAAGAAAGGAAAGCCGACTGGCATCAAACTAAAGTCAGTC
GCTCGTTGACACTAAAGTTACTGTACATATCCCGATCAATGATACAAAAT
ATGAAGTTTATTTCCTCCCAATGGGGTTCCCTTCTTGACGAACATCGTAT
AGGATTTGATGTGAAGATGGCCGCACAGGATGCTTATCAAATTGTGCGCT
ATATGATCAAGCGATACAAGAAAGAAGATACAACCGATAATCACAGGGCA
TTCAATAGAATGTTGGACGAAGCACGCATGTTTTATCGCCGCTCAAGGGA
GCTGCAAAACAAAATTCATTCATAAGACCAAGTGACGCCAAAGAGTTGAT
CAAAAAGAAAGCTTCCTCAAATGTGAGTGTATTCGACGAGGCCGACACTG
TAACGGAAGATATTGATGACGAAACAGCTGGAAATCATGTTCATATATCG
CTTAATGATGAGCTCCGGGAGCACATTCCCATAGTCATGAGGAATCACTT
TCCTGATACGCAACTCGATTATGTCATGGATGTGTTAGAGCCGGCTGCGT
ACAAGTTCTTCCTGGTTTCTAAATGCGATGTGTCGTGCGAGGAAGTCCAA
TATTATGTGGAAAACTATGAAGAACCTATGTCTGACAACTTGTTGAAAAA
ACTCCATAGACGACTATCCAAATTTACTAAAGACGATTTTGATAAAGAAT
GGCCAATTATCAAAAATGCTTTGGTCAAGATAGCTGAAGGAAAAACACAA
AGTTATAGACATGATGTTTACCATCGTAAAAGAACACATAATTTTTCTGA
TGGAAAACAAGTTCTAAAGCATCATCTTGGTTACTTCCATTTCGATTTTC
CTGGACACTCAACTGAAGAGGAGCTAGTTTTTAGTGATTTGCTTCATGGA
AGGTGACGACAATTCCAGTACTTCGACTGACTCACAATCAGTTTCGGCTG
GAAACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021445XLOC_021445Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036401-proteinTCONS_00036401-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036401-exon-sc0001454-1575043694:43823..43885TCONS_00036401-exon-sc0001454-1575043694:43823..43885Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:43240..43293TCONS_00036401-exon-sc0001454-1575043694:43240..43293Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:42754..42978TCONS_00036401-exon-sc0001454-1575043694:42754..42978Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:42292..42465TCONS_00036401-exon-sc0001454-1575043694:42292..42465Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:41957..42037TCONS_00036401-exon-sc0001454-1575043694:41957..42037Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:40796..40834TCONS_00036401-exon-sc0001454-1575043694:40796..40834Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1575043694:39717..40572TCONS_00036401-exon-sc0001454-1575043694:39717..40572Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:43823..43885TCONS_00036401-exon-sc0001454-1510915933:43823..43885Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:43240..43293TCONS_00036401-exon-sc0001454-1510915933:43240..43293Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:42754..42978TCONS_00036401-exon-sc0001454-1510915933:42754..42978Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:42292..42465TCONS_00036401-exon-sc0001454-1510915933:42292..42465Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:41957..42037TCONS_00036401-exon-sc0001454-1510915933:41957..42037Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:40796..40834TCONS_00036401-exon-sc0001454-1510915933:40796..40834Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1510915933:39717..40572TCONS_00036401-exon-sc0001454-1510915933:39717..40572Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:43823..43885TCONS_00036401-exon-sc0001454-1491911889:43823..43885Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:43240..43293TCONS_00036401-exon-sc0001454-1491911889:43240..43293Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:42754..42978TCONS_00036401-exon-sc0001454-1491911889:42754..42978Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:42292..42465TCONS_00036401-exon-sc0001454-1491911889:42292..42465Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:41957..42037TCONS_00036401-exon-sc0001454-1491911889:41957..42037Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:40796..40834TCONS_00036401-exon-sc0001454-1491911889:40796..40834Clytia hemisphaericaexon
TCONS_00036401-exon-sc0001454-1491911889:39717..40572TCONS_00036401-exon-sc0001454-1491911889:39717..40572Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001454supercontigsc0001454:39717..43885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.723216	1.07926	0.332653	0.231626	2.48201	2.46238	2.60877	2.93368	1.92496	2.44299	2.01711	2.40602	2.09657	1.55638	1.84068	1.80348	1.4875	1.3526	2.10245	2.63405	2.03297	2.42574	1.81377	2.34882	0.829795	1.72878	1.30981	0.992511	1.82579	1.01258
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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