TCONS_00036399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036399
Unique NameTCONS_00036399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length134

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036399 ID=TCONS_00036399|Name=TCONS_00036399|organism=Clytia hemisphaerica|type=transcript|length=134bp
catataGTCCAGTAGAATTATGTAAATTTTCACCAGAACCTGGACAAAAT
TCCCaacaagctgaaattttgcacagaggtcCCCAATAGGATACTTGACc
accaaaaaaaaagccccatcGATTTGGACATAGG
Run BLAST on NCBI

transcript from alignment at sc0001453:56251..56384

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036399 ID=TCONS_00036399|Name=TCONS_00036399|organism=Clytia hemisphaerica|type=transcript|length=134bp|location=Sequence derived from alignment at sc0001453:56251..56384 (Clytia hemisphaerica)
CCTATGTCCAAATCgatggggctttttttttggtgGTCAAGTATCCTATT
GGGgacctctgtgcaaaatttcagcttgttGGGAATTTTGTCCAGGTTCT
GGTGAAAATTTACATAATTCTACTGGACtatatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021443XLOC_021443Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036399-exon-sc0001453-1491911889:56251..56384TCONS_00036399-exon-sc0001453-1491911889:56251..56384Clytia hemisphaericaexon
TCONS_00036399-exon-sc0001453-1510915933:56251..56384TCONS_00036399-exon-sc0001453-1510915933:56251..56384Clytia hemisphaericaexon
TCONS_00036399-exon-sc0001453-1575043694:56251..56384TCONS_00036399-exon-sc0001453-1575043694:56251..56384Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001453supercontigsc0001453:56251..56384 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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