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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036379 ID=TCONS_00036379|Name=TCONS_00036379|organism=Clytia hemisphaerica|type=transcript|length=1192bp
ATTGCAATACAGCGAAATTGACAGTATGAAGTGATGAAAACAAATCAATG
AccaatttttaggcttttaaagGATGCTTAAACTGTTTTAATTGAAACTT
GGTTTAACCAAAATGTCAGAGGATTTATTGGTTGTTGGTGCAGGAAGGCT
TGGAATAAGGATAGCGCTAATATGGAAAAACACATATCCAACAGCCAAGG
TGACAGTAAAGAATAAATCAAAGGACATTGAGAGAAGCAAACAGTTCAAG
AAAGAAGGATTCGTGCCAATAACGAAAGAGGAGAGCCAGGCGTGCAGGGC
GCCCTTTGTGGTGTTTTGTGCGCCCTCAATGACTGGGTGCATTGAGGATA
TTGAGTTCAGTATTAAAGAGCATTGGGATACAGATCTCCCTGTATCTGCG
TTTGTTTTGACATCATCTGGAGGTGTTTACGAGGACAATTTCGGTGATAT
TGTCGACGAAAACACAGAAACAACCTCAACTCAGAGAAGTCAAAATTTGT
TGGCAAGAGAAAAGATTGTGCGCCAAAATAAGGGCTGTATTTTACGTTTG
GCTGGTTTATACTGTAAGGAATATGGAAATCATCATTTTTGGAGAGGTGT
CGAAAAGATACCATTGAAACCGAAAAATTGGATGAATTTGCTTCACTATG
ATGATGCTGCCAGGGCTGTTGTTAAATGTCTACAGAATCCATCCAAGATT
GAAAGAGAGGTCTTCCTAGTAGCTGATGGATATCCAATGTATATTCAAGA
CATAGCCAATGTTACCGGAATTGATGTTCAATTCACAGGAGGCGAAGGGA
TCGCAGGGAAAATATATGATATTAGTAAAATCAAAACAGAGCTTGAATGG
GAGCCGGAGTGTCCAAAATTTTACGACTTTTTTCAAGGAACTAAATGAAT
CAATTAAAACAGCCAGGTCTTGCTAAAACGTACCACACACATTTGTCGAT
TGTGCCGATGAAACCCTAATTCGAATGGAGGAAAAATCAGTCAAATAATT
GATTTTCGCTACTGAAGAATTGAACACAATTTTATGAAAGcttaaaaatt
tagttttttaccAATATGTATAAAATTCAATCttattgaaagtaattttc
ATGGTCTCTTTCATTCATCTTGCGGTTATCGTGATGGCGTAATTGGCGTT
TTTAAAgttcgtgatttcgtgatttaagattttaaagtgcgG Run BLAST on NCBI protein sequence of TCONS_00036379-protein >TCONS_00036379-protein ID=TCONS_00036379-protein|Name=TCONS_00036379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MSEDLLVVGAGRLGIRIALIWKNTYPTAKVTVKNKSKDIERSKQFKKEGF
VPITKEESQACRAPFVVFCAPSMTGCIEDIEFSIKEHWDTDLPVSAFVLT
SSGGVYEDNFGDIVDENTETTSTQRSQNLLAREKIVRQNKGCILRLAGLY
CKEYGNHHFWRGVEKIPLKPKNWMNLLHYDDAARAVVKCLQNPSKIEREV
FLVADGYPMYIQDIANVTGIDVQFTGGEGIAGKIYDISKIKTELEWEPEC
PKFYDFFQGTK Run BLAST on NCBI transcript from alignment at sc0001452:30171..31362 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036379 ID=TCONS_00036379|Name=TCONS_00036379|organism=Clytia hemisphaerica|type=transcript|length=1192bp|location=Sequence derived from alignment at sc0001452:30171..31362 (Clytia hemisphaerica)
CcgcactttaaaatcttaaatcacgaaatcacgaacTTTAAAAACGCCAA
TTACGCCATCACGATAACCGCAAGATGAATGAAAGAGACCATgaaaatta
ctttcaataaGATTGAATTTTATACATATTggtaaaaaactaaattttta
agCTTTCATAAAATTGTGTTCAATTCTTCAGTAGCGAAAATCAATTATTT
GACTGATTTTTCCTCCATTCGAATTAGGGTTTCATCGGCACAATCGACAA
ATGTGTGTGGTACGTTTTAGCAAGACCTGGCTGTTTTAATTGATTCATTT
AGTTCCTTGAAAAAAGTCGTAAAATTTTGGACACTCCGGCTCCCATTCAA
GCTCTGTTTTGATTTTACTAATATCATATATTTTCCCTGCGATCCCTTCG
CCTCCTGTGAATTGAACATCAATTCCGGTAACATTGGCTATGTCTTGAAT
ATACATTGGATATCCATCAGCTACTAGGAAGACCTCTCTTTCAATCTTGG
ATGGATTCTGTAGACATTTAACAACAGCCCTGGCAGCATCATCATAGTGA
AGCAAATTCATCCAATTTTTCGGTTTCAATGGTATCTTTTCGACACCTCT
CCAAAAATGATGATTTCCATATTCCTTACAGTATAAACCAGCCAAACGTA
AAATACAGCCCTTATTTTGGCGCACAATCTTTTCTCTTGCCAACAAATTT
TGACTTCTCTGAGTTGAGGTTGTTTCTGTGTTTTCGTCGACAATATCACC
GAAATTGTCCTCGTAAACACCTCCAGATGATGTCAAAACAAACGCAGATA
CAGGGAGATCTGTATCCCAATGCTCTTTAATACTGAACTCAATATCCTCA
ATGCACCCAGTCATTGAGGGCGCACAAAACACCACAAAGGGCGCCCTGCA
CGCCTGGCTCTCCTCTTTCGTTATTGGCACGAATCCTTCTTTCTTGAACT
GTTTGCTTCTCTCAATGTCCTTTGATTTATTCTTTACTGTCACCTTGGCT
GTTGGATATGTGTTTTTCCATATTAGCGCTATCCTTATTCCAAGCCTTCC
TGCACCAACAACCAATAAATCCTCTGACATTTTGGTTAAACCAAGTTTCA
ATTAAAACAGTTTAAGCATCctttaaaagcctaaaaattggTCATTGATT
TGTTTTCATCACTTCATACTGTCAATTTCGCTGTATTGCAAT Coding sequence (CDS) from alignment at sc0001452:30171..31362 >TCONS_00036379 ID=TCONS_00036379|Name=TCONS_00036379|organism=Clytia hemisphaerica|type=CDS|length=786bp|location=Sequence derived from alignment at sc0001452:30171..31362 (Clytia hemisphaerica)
TCATTTAGTTCCTTGAAAAAAGTCGTAAAATTTTGGACACTCCGGCTCCC
ATTCAAGCTCTGTTTTGATTTTACTAATATCATATATTTTCCCTGCGATC
CCTTCGCCTCCTGTGAATTGAACATCAATTCCGGTAACATTGGCTATGTC
TTGAATATACATTGGATATCCATCAGCTACTAGGAAGACCTCTCTTTCAA
TCTTGGATGGATTCTGTAGACATTTAACAACAGCCCTGGCAGCATCATCA
TAGTGAAGCAAATTCATCCAATTTTTCGGTTTCAATGGTATCTTTTCGAC
ACCTCTCCAAAAATGATGATTTCCATATTCCTTACAGTATAAACCAGCCA
AACGTAAAATACAGCCCTTATTTTGGCGCACAATCTTTTCTCTTGCCAAC
AAATTTTGACTTCTCTGAGTTGAGGTTGTTTCTGTGTTTTCGTCGACAAT
ATCACCGAAATTGTCCTCGTAAACACCTCCAGATGATGTCAAAACAAACG
CAGATACAGGGAGATCTGTATCCCAATGCTCTTTAATACTGAACTCAATA
TCCTCAATGCACCCAGTCATTGAGGGCGCACAAAACACCACAAAGGGCGC
CCTGCACGCCTGGCTCTCCTCTTTCGTTATTGGCACGAATCCTTCTTTCT
TGAACTGTTTGCTTCTCTCAATGTCCTTTGATTTATTCTTTACTGTCACC
TTGGCTGTTGGATATGTGTTTTTCCATATTAGCGCTATCCTTATTCCAAG
CCTTCCTGCACCAACAACCAATAAATCCTCTGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036379-exon-sc0001452-1491911889:30171..31362 | TCONS_00036379-exon-sc0001452-1491911889:30171..31362 | Clytia hemisphaerica | exon |
| TCONS_00036379-exon-sc0001452-1510915933:30171..31362 | TCONS_00036379-exon-sc0001452-1510915933:30171..31362 | Clytia hemisphaerica | exon |
| TCONS_00036379-exon-sc0001452-1575043694:30171..31362 | TCONS_00036379-exon-sc0001452-1575043694:30171..31362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001452 | supercontig | sc0001452:30171..31362 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR016040 | NAD(P)-bd_dom |
Blast
The following BLAST results are available for this feature:
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