|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036301 ID=TCONS_00036301|Name=TCONS_00036301|organism=Clytia hemisphaerica|type=transcript|length=878bp
gaattttttgtgttgcagacataatttttatgggtagtagGAAGGTTGAT
AGTGATCATGTAAGTATTAGTTTACCCCGGCACTCTCTAAAACGTCTCGG
CATTTTGATTTAAGATGGGTAAAATCAattgataattttgttgtttttct
tcaacttttagataaaaaaaatgtaattttaagcaaaacttcCCCCATGG
TAATGGAATTGAGATTCAgctAGTTATCATATTCTTTGTGAAATGCTGTT
AACAACACCGTCCCATAGAAGTATTGGCCATCCAAGTACAGGTTGCAGAT
GCAACAACGCGGCAACAACGATTGACTCAAGATTCAGACATTTTTGGCAT
GTTGACTGTCACGTCTGTTCTGCAGTGCCAGCAGGAAAGGTCTGCTAAAA
GATGAANAGGAGGAGATGCACCCAAATGCCCACCTTTCACAAAATGTCAA
GATGAAGAATGCACAAAATGTGAAGACTACTCCACAGAAGGGAAACGTGT
CGaattgtaaacaaacattttagTATAGTTATACTTAAACTAAACGTAAT
TTCTTTTATAAAGTTTAAGAAGTATCTTTGTATTTTCTCTACACTAACGT
ATCATTTGTTTAAACGGTATTTTTTAAtgtaattttcacatttttatttt
cttaaccAAGCACCTCATccgaaagttttctttttccaaaGCCAAGAcaa
gaatttctttttgaacTCAAAAGGTCTGACGAGTCAATGTTTGCTTCTTA
TAGGGTCATTATCTTTCTTACCTAGAAGTAACATTCAATTATTTAGGCAT
ACtatatttcaaccattttcggagtattgtaattttgtaataggttgaaa
ttttgaaatattgaaattttgaaatagg Run BLAST on NCBI transcript from alignment at sc0001437:795..1977- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036301 ID=TCONS_00036301|Name=TCONS_00036301|organism=Clytia hemisphaerica|type=transcript|length=1183bp|location=Sequence derived from alignment at sc0001437:795..1977- (Clytia hemisphaerica)
GAATTTTTTGTGTTGCAGACATAATTTTTATGGGTAGTAGGAAGGTTGAT
AGTGATCATGTAAGTATTAGTTTACCCCGGCACTCTCTAAAACGTCTCGG
CATTTTGATTTAAGATGGGTAAAATCAATTGATAATTTTGTTGTTTTTCT
TCAACTTTTAGATAAAAAAAATGTAATTTTAAGCAAAACTTCCCCCATGG
TAATGGAATTGAGATTCAGTAAGTATACTTGGTTTCCTCTGTGGTACTTT
TAGCTTTATCTAGGGAAACCATTGATTTCTGGGTTGGAAATTTCAAGTTT
CAACAACAAAAACATTTAAAAAAAATAACTTTGACATGTGATATTTATAA
ATTGTGACTACCTGAAGGGCCATGATTTTGACCAGTCAGTGGATTATGAT
TTTAAGGTGCAAGGCTTTAGTACTTTTACATTCAAAATATTGTTTAATCC
GTGGAATTTGCATTTTGTATTTAAACGGATTAGGGTAATTTCATATACAG
ATTTCCATTTTATATATTTTCAGGCTAGTTATCATATTCTTTGTGAAATG
CTGTTAACAACACCGTCCCATAGAAGTATTGGCCATCCAAGTACAGGTTG
CAGATGCAACAACGCGGCAACAACGATTGACTCAAGATTCAGACATTTTT
GGCATGTTGACTGTCACGTCTGTTCTGCAGTGCCAGCAGGAAAGGTCTGC
TAAAAGATGAANAGGAGGAGATGCACCCAAATGCCCACCTTTCACAAAAT
GTCAAGATGAAGAATGCACAAAATGTGAAGACTACTCCACAGAAGGGAAA
CGTGTCGAATTGTAAACAAACATTTTAGTATAGTTATACTTAAACTAAAC
GTAATTTCTTTTATAAAGTTTAAGAAGTATCTTTGTATTTTCTCTACACT
AACGTATCATTTGTTTAAACGGTATTTTTTAATGTAATTTTCACATTTTT
ATTTTCTTAACCAAGCACCTCATCCGAAAGTTTTCTTTTTCCAAAGCCAA
GACAAGAATTTCTTTTTGAACTCAAAAGGTCTGACGAGTCAATGTTTGCT
TCTTATAGGGTCATTATCTTTCTTACCTAGAAGTAACATTCAATTATTTA
GGCATACTATATTTCAACCATTTTCGGAGTATTGTAATTTTGTAATAGGT
TGAAATTTTGAAATATTGAAATTTTGAAATAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036301-exon-sc0001437-1575043694:1760..1977 | TCONS_00036301-exon-sc0001437-1575043694:1760..1977 | Clytia hemisphaerica | exon |
| TCONS_00036301-exon-sc0001437-1575043694:795..1454 | TCONS_00036301-exon-sc0001437-1575043694:795..1454 | Clytia hemisphaerica | exon |
| TCONS_00036301-exon-sc0001437-1510915933:1760..1977 | TCONS_00036301-exon-sc0001437-1510915933:1760..1977 | Clytia hemisphaerica | exon |
| TCONS_00036301-exon-sc0001437-1510915933:795..1454 | TCONS_00036301-exon-sc0001437-1510915933:795..1454 | Clytia hemisphaerica | exon |
| TCONS_00036301-exon-sc0001437-1491911889:1760..1977 | TCONS_00036301-exon-sc0001437-1491911889:1760..1977 | Clytia hemisphaerica | exon |
| TCONS_00036301-exon-sc0001437-1491911889:795..1454 | TCONS_00036301-exon-sc0001437-1491911889:795..1454 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001437 | supercontig | sc0001437:795..1977 - |
Blast
The following BLAST results are available for this feature:
|
