TCONS_00036293 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036293
Unique NameTCONS_00036293
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036293 ID=TCONS_00036293|Name=TCONS_00036293|organism=Clytia hemisphaerica|type=transcript|length=320bp
TACTTAATAAATTAACGACATGATAACCTGGTGCCTTACAACAACAGAAC
TTTCCTGGCACTTATTCGGGATCCTTCCGCTGCTTTTATCTGATAAACTG
GCAAAGATAGTTGTTCAGCTGTGTATTAATGCCTACACAATGATGTGTTG
CCTTGGAAATGACCGCCTAACTAATTATTTTGATTGAGTACGTACTTCAA
CTTTTTACCTAAACTTGGAAAAAACTGTTTTCTGGTCTACTTTTCTTACC
TCATCAAGTCGCACAAATCAAGTTGCATATAAATGAAAGGCTTTTATAAT
ATGATAATCACAGTTAGGAG
Run BLAST on NCBI

transcript from alignment at sc0001436:37370..37689

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036293 ID=TCONS_00036293|Name=TCONS_00036293|organism=Clytia hemisphaerica|type=transcript|length=320bp|location=Sequence derived from alignment at sc0001436:37370..37689 (Clytia hemisphaerica)
CTCCTAACTGTGATTATCATATTATAAAAGCCTTTCATTTATATGCAACT
TGATTTGTGCGACTTGATGAGGTAAGAAAAGTAGACCAGAAAACAGTTTT
TTCCAAGTTTAGGTAAAAAGTTGAAGTACGTACTCAATCAAAATAATTAG
TTAGGCGGTCATTTCCAAGGCAACACATCATTGTGTAGGCATTAATACAC
AGCTGAACAACTATCTTTGCCAGTTTATCAGATAAAAGCAGCGGAAGGAT
CCCGAATAAGTGCCAGGAAAGTTCTGTTGTTGTAAGGCACCAGGTTATCA
TGTCGTTAATTTATTAAGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021353XLOC_021353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036293-exon-sc0001436-1491911889:37370..37689TCONS_00036293-exon-sc0001436-1491911889:37370..37689Clytia hemisphaericaexon
TCONS_00036293-exon-sc0001436-1510915933:37370..37689TCONS_00036293-exon-sc0001436-1510915933:37370..37689Clytia hemisphaericaexon
TCONS_00036293-exon-sc0001436-1575043694:37370..37689TCONS_00036293-exon-sc0001436-1575043694:37370..37689Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001436supercontigsc0001436:37370..37689 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.8227	1.18532	2.90682	3.55606	1.55119	0.454177	1.84971	0.895641	1.02742	1.18293	2.73626	0.867785	2.30805	1.41107	1.39319	1.4918	0.442019	1.41952	1.13877	1.22309	1.53928	2.85796	1.2934	0	2.44151	1.13949	1.48202	3.33468	0.327689	0.208484
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036293 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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