TCONS_00036291 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036291
Unique NameTCONS_00036291
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036291 ID=TCONS_00036291|Name=TCONS_00036291|organism=Clytia hemisphaerica|type=transcript|length=186bp
TAATATTATGCCTAGTTTTTGTATTAAAGCTCGCCTCAACTCTCAAATAT
TTAGCAGTAAAAGGGTTTCTAGGAATCCTGGGCGTGTCAATTAGGAAAGC
AACGTATATTAATTTTCAGAGCGCCAAAGTTTTTATGTAGATATAAATAT
ATTATATAGCTATTGTACATATCAATATGGTTTTAG
Run BLAST on NCBI

transcript from alignment at sc0001436:26356..26541

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036291 ID=TCONS_00036291|Name=TCONS_00036291|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0001436:26356..26541 (Clytia hemisphaerica)
CTAAAACCATATTGATATGTACAATAGCTATATAATATATTTATATCTAC
ATAAAAACTTTGGCGCTCTGAAAATTAATATACGTTGCTTTCCTAATTGA
CACGCCCAGGATTCCTAGAAACCCTTTTACTGCTAAATATTTGAGAGTTG
AGGCGAGCTTTAATACAAAAACTAGGCATAATATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021351XLOC_021351Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036291-exon-sc0001436-1491911889:26356..26541TCONS_00036291-exon-sc0001436-1491911889:26356..26541Clytia hemisphaericaexon
TCONS_00036291-exon-sc0001436-1510915933:26356..26541TCONS_00036291-exon-sc0001436-1510915933:26356..26541Clytia hemisphaericaexon
TCONS_00036291-exon-sc0001436-1575043694:26356..26541TCONS_00036291-exon-sc0001436-1575043694:26356..26541Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001436supercontigsc0001436:26356..26541 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036291 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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