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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036284 ID=TCONS_00036284|Name=TCONS_00036284|organism=Clytia hemisphaerica|type=transcript|length=1099bp
CTATTCACTTTTAGGTTTCCGTTTAAGCTaaacaaaagtttcaaaatcaa
TCCAGATGATCAAGCAGTGCAGGAGGATGTGGAAACTTGTGGAGTTCCAG
CCTTTAGCATTGTCAACTTACCAATCGCAATAACTTCTAAATTAACGCAA
GAAGCAACACGCTATTTAACCAATAAAAACTGGGTAATCGCTGGTCCACA
AGGCAGCTCAATCTGGCTCTGTTGTAACCCGACACGTGAGAAAGACCCGA
TAACGGTAAAACAGTCGGAAAACAAGTTTGTCTGTGATGAAAAATCATGC
ATTACTTTTAAAATACATAAAGTGTGTCACCACACAATAGCTTCTGCTGT
TAAagcacaaaaatttcaaaactataTCAAACTTGTGAATAGTAAATCGT
GTTCTGAGATGGCTTCAAATGTTGTTTTtggtcaaaaagaaaaaaatgca
ggacgaaaaaaaaacaaaaatactcagCGACGGAAAGGACCAGCCAACAC
CAAGCGACAGAAAATAACAGAGCTTGTTGAAATAGAAGGAAATCTGTCTG
GATCGACACATGATCAAGCTTTGTGTTTTGAAGGATCAATAATCCAATCA
TCTCAACCATCTCGATCTGGTAGCTATGATCAACAGTCTcaatcattaaa
ttttcaacaaCTACCTCAGTCATTGTCAAGTCAAGCGTCTCATTCATTTA
GCCATAGTCAACAACAGCAGcaacaacaacgacaacagCAATTTTCCCAA
TCCTTCAGCTATCACCTGCCGCATCCGTCTCAATTGTTGAATGCTCAACT
GCCGTCTCAATCATTTGCTTTTCAACCACCTCAAGCAACGCTTCAGCAGT
TGCCCCAAGGAAATATCGCAAGATCGCCAAGTATTAATGGCTTCAACGGG
GCATCAACTAACGCGAGTCCTTTAGGTCCCCTTTCTCCAGATCCATTACC
GGGAACCTATGAGATAGGGCTTGTTCGTTATTGTCATCCAAATACAAGAG
TATGTTACGGTTGTCGACGTCCGCTGCGGACAAATGAAGAGAACCAGATG
ATAATCGTTTCAAAAACCAATCGTGAGTATTGGGACAATCAAGAAGGCC Run BLAST on NCBI protein sequence of TCONS_00036284-protein >TCONS_00036284-protein ID=TCONS_00036284-protein|Name=TCONS_00036284-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
LFTFRFPFKLNKSFKINPDDQAVQEDVETCGVPAFSIVNLPIAITSKLTQ
EATRYLTNKNWVIAGPQGSSIWLCCNPTREKDPITVKQSENKFVCDEKSC
ITFKIHKVCHHTIASAVKAQKFQNYIKLVNSKSCSEMASNVVFGQKEKNA
GRKKNKNTQRRKGPANTKRQKITELVEIEGNLSGSTHDQALCFEGSIIQS
SQPSRSGSYDQQSQSLNFQQLPQSLSSQASHSFSHSQQQQQQQRQQQFSQ
SFSYHLPHPSQLLNAQLPSQSFAFQPPQATLQQLPQGNIARSPSINGFNG
ASTNASPLGPLSPDPLPGTYEIGLVRYCHPNTRVCYGCRRPLRTNEENQM
IIVSKTNREYWDNQEG Run BLAST on NCBI transcript from alignment at sc0001435:23474..24572 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036284 ID=TCONS_00036284|Name=TCONS_00036284|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at sc0001435:23474..24572 (Clytia hemisphaerica)
GGCCTTCTTGATTGTCCCAATACTCACGATTGGTTTTTGAAACGATTATC
ATCTGGTTCTCTTCATTTGTCCGCAGCGGACGTCGACAACCGTAACATAC
TCTTGTATTTGGATGACAATAACGAACAAGCCCTATCTCATAGGTTCCCG
GTAATGGATCTGGAGAAAGGGGACCTAAAGGACTCGCGTTAGTTGATGCC
CCGTTGAAGCCATTAATACTTGGCGATCTTGCGATATTTCCTTGGGGCAA
CTGCTGAAGCGTTGCTTGAGGTGGTTGAAAAGCAAATGATTGAGACGGCA
GTTGAGCATTCAACAATTGAGACGGATGCGGCAGGTGATAGCTGAAGGAT
TGGGAAAATTGctgttgtcgttgttgttgCTGCTGTTGTTGACTATGGCT
AAATGAATGAGACGCTTGACTTGACAATGACTGAGGTAGttgttgaaaat
ttaatgattgAGACTGTTGATCATAGCTACCAGATCGAGATGGTTGAGAT
GATTGGATTATTGATCCTTCAAAACACAAAGCTTGATCATGTGTCGATCC
AGACAGATTTCCTTCTATTTCAACAAGCTCTGTTATTTTCTGTCGCTTGG
TGTTGGCTGGTCCTTTCCGTCGctgagtatttttgtttttttttcgtcct
gcatttttttctttttgaccaAAAACAACATTTGAAGCCATCTCAGAACA
CGATTTACTATTCACAAGTTTGAtatagttttgaaatttttgtgctTTAA
CAGCAGAAGCTATTGTGTGGTGACACACTTTATGTATTTTAAAAGTAATG
CATGATTTTTCATCACAGACAAACTTGTTTTCCGACTGTTTTACCGTTAT
CGGGTCTTTCTCACGTGTCGGGTTACAACAGAGCCAGATTGAGCTGCCTT
GTGGACCAGCGATTACCCAGTTTTTATTGGTTAAATAGCGTGTTGCTTCT
TGCGTTAATTTAGAAGTTATTGCGATTGGTAAGTTGACAATGCTAAAGGC
TGGAACTCCACAAGTTTCCACATCCTCCTGCACTGCTTGATCATCTGGAt
tgattttgaaacttttgtttAGCTTAAACGGAAACCTAAAAGTGAATAG Coding sequence (CDS) from alignment at sc0001435:23474..24572 >TCONS_00036284 ID=TCONS_00036284|Name=TCONS_00036284|organism=Clytia hemisphaerica|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0001435:23474..24572 (Clytia hemisphaerica)
GCCTTCTTGATTGTCCCAATACTCACGATTGGTTTTTGAAACGATTATCA
TCTGGTTCTCTTCATTTGTCCGCAGCGGACGTCGACAACCGTAACATACT
CTTGTATTTGGATGACAATAACGAACAAGCCCTATCTCATAGGTTCCCGG
TAATGGATCTGGAGAAAGGGGACCTAAAGGACTCGCGTTAGTTGATGCCC
CGTTGAAGCCATTAATACTTGGCGATCTTGCGATATTTCCTTGGGGCAAC
TGCTGAAGCGTTGCTTGAGGTGGTTGAAAAGCAAATGATTGAGACGGCAG
TTGAGCATTCAACAATTGAGACGGATGCGGCAGGTGATAGCTGAAGGATT
GGGAAAATTGctgttgtcgttgttgttgCTGCTGTTGTTGACTATGGCTA
AATGAATGAGACGCTTGACTTGACAATGACTGAGGTAGttgttgaaaatt
taatgattgAGACTGTTGATCATAGCTACCAGATCGAGATGGTTGAGATG
ATTGGATTATTGATCCTTCAAAACACAAAGCTTGATCATGTGTCGATCCA
GACAGATTTCCTTCTATTTCAACAAGCTCTGTTATTTTCTGTCGCTTGGT
GTTGGCTGGTCCTTTCCGTCGctgagtatttttgtttttttttcgtcctg
catttttttctttttgaccaAAAACAACATTTGAAGCCATCTCAGAACAC
GATTTACTATTCACAAGTTTGAtatagttttgaaatttttgtgctTTAAC
AGCAGAAGCTATTGTGTGGTGACACACTTTATGTATTTTAAAAGTAATGC
ATGATTTTTCATCACAGACAAACTTGTTTTCCGACTGTTTTACCGTTATC
GGGTCTTTCTCACGTGTCGGGTTACAACAGAGCCAGATTGAGCTGCCTTG
TGGACCAGCGATTACCCAGTTTTTATTGGTTAAATAGCGTGTTGCTTCTT
GCGTTAATTTAGAAGTTATTGCGATTGGTAAGTTGACAATGCTAAAGGCT
GGAACTCCACAAGTTTCCACATCCTCCTGCACTGCTTGATCATCTGGAtt
gattttgaaacttttgtttAGCTTAAACGGAAACCTAAAAGTGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036284-exon-sc0001435-1491911889:23474..24572 | TCONS_00036284-exon-sc0001435-1491911889:23474..24572 | Clytia hemisphaerica | exon |
| TCONS_00036284-exon-sc0001435-1510915933:23474..24572 | TCONS_00036284-exon-sc0001435-1510915933:23474..24572 | Clytia hemisphaerica | exon |
| TCONS_00036284-exon-sc0001435-1575043694:23474..24572 | TCONS_00036284-exon-sc0001435-1575043694:23474..24572 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001435 | supercontig | sc0001435:23474..24572 . |
Blast
The following BLAST results are available for this feature:
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