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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036278 ID=TCONS_00036278|Name=TCONS_00036278|organism=Clytia hemisphaerica|type=transcript|length=844bp
CTNATGTCGATGGTGCTGCTGGAGATGATGAAAGTGCTGGTGAAAATGAA
GaagctccaaccaaaaagaaatcaagaaagaaaTCAACTTCAAAGAAAAC
GCCAAAAGTGCCAAAGAGCCCTAAAAAGTCAGCCTCTCCAAAGAAAAAGG
CTGCACCGAAAACGCCAAAGCGGGGTAACAAACTTATTCCAAATCCTGAC
ATCAATTTATTGGATGAAGACCCAACATACTCCAAGGACAGCACGGTTCC
TCTGTCCATAGAGCGACAGGCCTTTAAAGCTGTCATTACCAACGATGGCA
CTTTATTGGAAGCTTTGCATAAGGATGGAAAGAATTGCTATACTTTATTT
CAACAACGTAGCCCTCAAATATCACGTTCAGCTTACAAGTACGCTTTGCT
TCAAGAGAACTTGGACTATTGCAAACTGATGTTAAAAGATAGAGATGAAG
TTACTGCAAAACCAAAAACTGTCGATTTGAGCAGAAAAGATACCGGAAAG
TAAGGATTTTGAAATATTGGGAATAATGCATATTTTTCGACATTCAGAAA
TAACACTTCACCATGAGggtttattggacctaccccggtggggtggaggt
cctataaattaacctttgtccgttcgttcgttcgtctgttcgttcgttcg
ttcgttattagctttcctcgtgattggctcattagttttttctgattttt
tgcacaaagatgtataactataaaccctcaaatgtgacggagcccgattt
tcgaaaaaaaaaatttttgggccaatcagattttttcaaaaaattttagt
tGGCTCCAAataacgcatgtttatctataagaatcactattaat Run BLAST on NCBI transcript from alignment at sc0001435:6530..7952+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036278 ID=TCONS_00036278|Name=TCONS_00036278|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at sc0001435:6530..7952+ (Clytia hemisphaerica)
CTNATGTCGATGGTGCTGCTGGAGATGATGAAAGTGCTGGTGAAAATGAA
GGTATTTTTTCTGAGAATTTCAACTGATCTTTTCTTAAAAAGCAACCTAT
GAGATCTGCATCTTGTTCTATTGGGTTGGCATAAGACTATCCTGTATGAA
TCATGAATCAATAAGCACTCTTGAGGTAATTATAATTTTTACTTGGTTTT
TCTTCATGAAACTCTCTGAGGAGGTCTCCATTTTGTTAGGTTAGGTTTAG
TTTTAAGTTTAAAATACAGTGGGACGCACTATAATTGTTAAGCTGTTTTA
AGAATACAGAGTTCATGATATgcgccattgcaatgtcttctacattaccc
aacagctgattggttgaaagttacgtattgactgattttacgtcacttat
acaaccaatcagctattgggtccgtgatgtaatggcaatggtgcatatca
tgaatagagggAGTAATGATTAAAAGGCTCTCTCAgtattttaagccatt
ttactTAGAGTATTGTATTGTCCGGTATAAAAAAGGAACCCCTTTTCTGG
TCATGACATAGAATCACCTCTAATTTGCAAAATGAGTTTTCGTGCTTTCG
TCATTTGTatattttactttaaattttcagaagctccaaccaaaaagaaa
tcaagaaagaaaTCAACTTCAAAGAAAACGCCAAAAGTGCCAAAGAGCCC
TAAAAAGTCAGCCTCTCCAAAGAAAAAGGCTGCACCGAAAACGCCAAAGC
GGGGTAACAAACTTATTCCAAATCCTGACATCAATTTATTGGATGAAGAC
CCAACATACTCCAAGGACAGCACGGTTCCTCTGTCCATAGAGCGACAGGC
CTTTAAAGCTGTCATTACCAACGATGGCACTTTATTGGAAGCTTTGCATA
AGGATGGAAAGAATTGCTATACTTTATTTCAACAACGTAGCCCTCAAATA
TCACGTTCAGCTTACAAGTACGCTTTGCTTCAAGAGAACTTGGACTATTG
CAAACTGATGTTAAAAGATAGAGATGAAGTTACTGCAAAACCAAAAACTG
TCGATTTGAGCAGAAAAGATACCGGAAAGTAAGGATTTTGAAATATTGGG
AATAATGCATATTTTTCGACATTCAGAAATAACACTTCACCATGAGggtt
tattggacctaccccggtggggtggaggtcctataaattaacctttgtcc
gttcgttcgttcgtctgttcgttcgttcgttcgttattagctttcctcgt
gattggctcattagttttttctgattttttgcacaaagatgtataactat
aaaccctcaaatgtgacggagcccgattttcgaaaaaaaaaatttttggg
ccaatcagattttttcaaaaaattttagttGGCTCCAAataacgcatgtt
tatctataagaatcactattaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036278-exon-sc0001435-1491911889:6530..6580 | TCONS_00036278-exon-sc0001435-1491911889:6530..6580 | Clytia hemisphaerica | exon |
| TCONS_00036278-exon-sc0001435-1510915933:6530..6580 | TCONS_00036278-exon-sc0001435-1510915933:6530..6580 | Clytia hemisphaerica | exon |
| TCONS_00036278-exon-sc0001435-1575043694:6530..6580 | TCONS_00036278-exon-sc0001435-1575043694:6530..6580 | Clytia hemisphaerica | exon |
| TCONS_00036278-exon-sc0001435-1491911889:7160..7952 | TCONS_00036278-exon-sc0001435-1491911889:7160..7952 | Clytia hemisphaerica | exon |
| TCONS_00036278-exon-sc0001435-1510915933:7160..7952 | TCONS_00036278-exon-sc0001435-1510915933:7160..7952 | Clytia hemisphaerica | exon |
| TCONS_00036278-exon-sc0001435-1575043694:7160..7952 | TCONS_00036278-exon-sc0001435-1575043694:7160..7952 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001435 | supercontig | sc0001435:6530..7952 + |
Blast
The following BLAST results are available for this feature:
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