|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036271 ID=TCONS_00036271|Name=TCONS_00036271|organism=Clytia hemisphaerica|type=transcript|length=295bp
TTTGTACTGCAGTCCTATTGATAATTACATTTTATCTTTGAATAACATTA
TAActgtttcattaatttttaggaaaatcacgAACATGGGAGACACAATA
TCCCAATCTATCAGGAATGTTGGTGAACTAGTTAAAAGCCAAGGGGAAAA
GATTGAAGCCCTCGAAACAAAACTTCAATCCATCGAAAACAAATTGAGCC
AGCACCTGGAAACGATTAAAAAGTCAACAAAAGTGActgttccaaaattt
tttcagAAAAGGATCGTGCGGACTTATGGTTTGTGCCCAGAGGAG Run BLAST on NCBI transcript from alignment at sc0001433:17571..18734- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036271 ID=TCONS_00036271|Name=TCONS_00036271|organism=Clytia hemisphaerica|type=transcript|length=1164bp|location=Sequence derived from alignment at sc0001433:17571..18734- (Clytia hemisphaerica)
TTTGTACTGCAGTCCTATTGATAATTACATTTTATCTTTGAATAACATTA
TAACTGTTTCATTAATTTTTAGGAAAATCACGAACATGGGAGACACAATA
TCCCAATCTATCAGGAATGTTGGTGAACTAGTTAAAAGCCAAGGGGAAAA
GATTGAAGCCCTCGAAACAAAACTTCAATCCATCGAAAACAAATTGAGCC
AGCACCTGGAAACGATTAAAAAGTCAACAAAAGTGACTGTTCCAAAATTT
TTTCAGGTAAGACTTTGCAGGACTTTGATTCATTACTCTGAATTAATATT
ATTAAAGACTTTCCAATTGTTTAAATTTAGTTTTGTCACTAACTTTTTCA
TTTATCATCGTCACTTGAAGGAGCAAAAAAAAAACCCACATTTGTAGTTT
TGGTCCTCTGTTTTAGGGTCAGGCCTGGAGTTGCTTGTAAGGTTGCTTAT
GAACCAAAAGCTTAAAATGGGCTAAAAACATTTTTCATTCTTAAATTGAC
AATAAAGGCATTTCTCAGATTTGCAAGGCCTTCTGTTATTTTTTATTGCA
GAAGAAAAAAGTTGCTAATTTGGTTTTGAGGTTTTTTTGAGATTTTACTG
AATTTAAAAGAAGGGGGGCTTGTGAAAATTTCAAATAAAAGGGGTGGCTT
GGACAAAAAGAGGGGGCTTGGAAGATTTGGCAATTTGCAAAAGAGTGTTT
TCCATTCATTTTTAAATTTCTCAACAATTATTATATTTCCATTCATTTGA
ATGAAGCAAAAACTCTTCTTTCTACAACTCTTGATGGAGTATGTTGCTTT
TTCAACCTTTGCAAGACAGCTGCTTTTGTTTTCCACCACTTATTTCACAA
AAGATCGAAACAGAGGGGGGTTGAACTTAAACCTGGGAAAAAGAGGGGGG
TTGAGGAATTTTCATTTTTAAGAGGGGGTTGAGCTAAAAGAGGGGTGTCA
TTTTTAAGGGGGGCTTGATACCCCTCTGCCCACTATGATTTTGAGACCTA
ATCCCTTTAAAGTAGGGCTATCTTGGGATTGGTGACACAGGGGTGAGTTA
AAATTAACTTTTGGAAAGTTTTATGCTAGAAATTTTGAAATTTTAATAGC
TCATAGACATTATTTTCTTGTTTAGAAAAGGATCGTGCGGACTTATGGTT
TGTGCCCAGAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036271-exon-sc0001433-1575043694:18479..18734 | TCONS_00036271-exon-sc0001433-1575043694:18479..18734 | Clytia hemisphaerica | exon |
| TCONS_00036271-exon-sc0001433-1575043694:17571..17609 | TCONS_00036271-exon-sc0001433-1575043694:17571..17609 | Clytia hemisphaerica | exon |
| TCONS_00036271-exon-sc0001433-1510915933:18479..18734 | TCONS_00036271-exon-sc0001433-1510915933:18479..18734 | Clytia hemisphaerica | exon |
| TCONS_00036271-exon-sc0001433-1510915933:17571..17609 | TCONS_00036271-exon-sc0001433-1510915933:17571..17609 | Clytia hemisphaerica | exon |
| TCONS_00036271-exon-sc0001433-1491911889:18479..18734 | TCONS_00036271-exon-sc0001433-1491911889:18479..18734 | Clytia hemisphaerica | exon |
| TCONS_00036271-exon-sc0001433-1491911889:17571..17609 | TCONS_00036271-exon-sc0001433-1491911889:17571..17609 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001433 | supercontig | sc0001433:17571..18734 - |
Blast
The following BLAST results are available for this feature:
|
