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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036267 ID=TCONS_00036267|Name=TCONS_00036267|organism=Clytia hemisphaerica|type=transcript|length=611bp
attccgcggaatagctattccggccggaacagctattccggttccggcat
tccgGCATTCCGCCGTTCTGCGTTTTGTCTCTACCCCGCGAAAAttcgtt
ttctttcaaaacttaaaaaatatcgaGGGATCAAGCAAGAAATAAAGTGC
AAGATACTGCTGGCTATCAAAAAGCAACACTTCAACTCAACAAACGAACT
TGTACCTAGTTTGGAAGGTGGCGAAATCCTATGTTATGGAATTAACAATC
CAGTTGTCGAGTTGTCATCTTCATCGGTTCAATTTCAGTAACGAACGTTA
AACTGGTCGATCAAGCTCTCCAGGAAAATTGTTTGGAATATTTGGATTTT
CGAAGTGTATCAATGGACGATAGATCAAAACCGTACTGCCGACTAAGCTA
ATGACGTCCTTTGAATTTCACCATGAAGTTTTGTAAATACGTCAATTTTC
ATCTGTCTcgctttatctttattttttgggATTTCTTTAGTAGGGTGTGT
TTGGTTTTGGCAGTTTCTTTTTGTATGATAAAATTTTGGATAGTCGTAAT
ATCCCTCTTTATCGTAGAGATTCTGGTGGAATTCCAATGATCGATATTGA
GTCGTTTGAAC Run BLAST on NCBI transcript from alignment at sc0001433:3604..5293+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036267 ID=TCONS_00036267|Name=TCONS_00036267|organism=Clytia hemisphaerica|type=transcript|length=1690bp|location=Sequence derived from alignment at sc0001433:3604..5293+ (Clytia hemisphaerica)
attccgcggaatagctattccggccggaacagctattccggttccggcat
tccgGCATTCCGCCGTTCTGCGTTTTGTCTCTACCCCGCGAAAAttcgtt
ttctttcaaaacttaaaaaatatcgaGGGATCAAGCAAGAAATAAAGTGC
AAGATACTGCTGGCTATCAAAAAGCAACACTTCAACTCAACAAACGAAGT
AAGTCAATTTgtaatttatcaaacaaatccAAGTATTTATATTGATTTGT
AGCTGAAAATAGTATAGGTTGGTGGACTAGTCTGTCACTGATACGACTTA
TACACAACAATTGACAGATgcagccggcggagagattttttagaaatatg
tgttcttatcttttaGTCTTTCTAGGAGACCACATGTTATGAACTTCaat
tttcttatacaaatgatgtgttctgatttctagaaAACTATtgcactatt
tgtctccctaaactttttgatatatacacgttttttatataaggaacacg
tttataaggaactcgaggctgaaaatggtccaaaaaataaggaattgttt
aggaactgctcaggctgagattAAGGAAACAAGTTTTAAGGGGCAGTATA
AGAcggttatccaaacttagcagctatgtaaataaggaactttgaggcta
aaattctctttaaaaataaggaactccaggctcagagcaaagttaacgtt
ccttataaaaaaaaacgcgtacttgtaagatatttgttttttccacgaga
gatgtgttctgaaactttctagggttactaggcaacaagatgaCATAAAT
TTTATCTATATTATACCCCTTGTCTACtcaaaagatgtgttctgaagctt
tctagggttaccaagacaacaagaacacgtttgATGACATTggttatacc
cctgtctcgtcagaacacatcattatttctagctgattaattttcgaaga
ccttatcagaacagatcaaaatttctagctgaaacatactctcagaacac
aacggaaaaaaaggtcgcctcgccggctgatTTCAAACTGAGTGTCTTTT
TTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGACTCTGCTTGAGCCACAAAGACTGGACTGTTGTACCAAa
actcattactttttctacttTTCACAGCTTGTACCTAGTTTGGAAGGTGG
CGAAATCCTATGTTATGGAATTAACAATCCAGTTGTCGAGTTGTCATCTT
CATCGGTTCAATTTCAGTAACGAACGTTAAACTGGTCGATCAAGCTCTCC
AGGAAAATTGTTTGGAATATTTGGATTTTCGAAGTGTATCAATGGACGAT
AGATCAAAACCGTACTGCCGACTAAGCTAATGACGTCCTTTGAATTTCAC
CATGAAGTTTTGTAAATACGTCAATTTTCATCTGTCTcgctttatcttta
ttttttgggATTTCTTTAGTAGGGTGTGTTTGGTTTTGGCAGTTTCTTTT
TGTATGATAAAATTTTGGATAGTCGTAATATCCCTCTTTATCGTAGAGAT
TCTGGTGGAATTCCAATGATCGATATTGAGTCGTTTGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036267-exon-sc0001433-1491911889:3604..3801 | TCONS_00036267-exon-sc0001433-1491911889:3604..3801 | Clytia hemisphaerica | exon |
| TCONS_00036267-exon-sc0001433-1510915933:3604..3801 | TCONS_00036267-exon-sc0001433-1510915933:3604..3801 | Clytia hemisphaerica | exon |
| TCONS_00036267-exon-sc0001433-1575043694:3604..3801 | TCONS_00036267-exon-sc0001433-1575043694:3604..3801 | Clytia hemisphaerica | exon |
| TCONS_00036267-exon-sc0001433-1491911889:4881..5293 | TCONS_00036267-exon-sc0001433-1491911889:4881..5293 | Clytia hemisphaerica | exon |
| TCONS_00036267-exon-sc0001433-1510915933:4881..5293 | TCONS_00036267-exon-sc0001433-1510915933:4881..5293 | Clytia hemisphaerica | exon |
| TCONS_00036267-exon-sc0001433-1575043694:4881..5293 | TCONS_00036267-exon-sc0001433-1575043694:4881..5293 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001433 | supercontig | sc0001433:3604..5293 + |
Blast
The following BLAST results are available for this feature:
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