TCONS_00036254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036254
Unique NameTCONS_00036254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2057

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036254 ID=TCONS_00036254|Name=TCONS_00036254|organism=Clytia hemisphaerica|type=transcript|length=2057bp
aaaatattaaaaagatGTCAGATGACTTCTGGGATTGAGAAATTGGAAAT
GAGTATCCTCCATGGAAAGTTTTGCAATTCAGCAACAAATTATCTTCAAG
AAAGGATGTTGGAAGGATAGAAGAGGAGTAACTTCACATCCAGAACAGAT
TTTTAAAACAAACGATGATTTGCAATTTCCACATTTTCATGCATCCTACC
CCGGGAAGACTTACCTTCTTATTTCAGAGTTGAAGGACTGCTACAGTCAA
GAGATATGATGAAGTTTAACATGAAGTTGAAAGGGACATCCAATAATTCC
AAACCAGCCAAGGTCAAAGTACCAAAAATTGagatcaatgaatgtaaagt
taAAACAAAGGACCacaaaaagttggaaaatgaaATGTTACAACAAGCGA
AGGAAGCTCAGCTTTTGTTGGAACAATTATTATGCGAAGATCGTTATGAT
GAATTCGGGAGACCTCGATCGAACTCACTGAACGCAACAGTTGAAAATTT
GATTCTTTCCAAGAAAGTTCCAAACAAAGCGACCAGCAAACCGCGTGGTA
GTGTGCCCACACTCACCAACATTCCCAGGAAATTCTTAATACGTAACAAA
AACAACTCCAACGACCAATCCGCAACATCTTTACCTTGCTCACCCAAAGA
TAATCGTCGCACCAAAATGAGTCCTTTAAAATTCATGCGTAAATATAATA
CCGACAACTCACAAACGACGAGCAACGAGTGCCGATCACCGAAATCTAAA
CGAACATTCGAACCGAAAGACGTGACTGCAGAGAGCTCGCCCAGCGAGGC
GGCTTCGAGCGCAAAATGTACTTCTTATAAACAAATGAACCAAGAAGATG
AACAAGATGAGAGTCAGCAAAATTGGGAAGGGGAAAGCATATAGTTAAGT
TGAGAGAAAGTGTTCAAATCCTTTAAAAGGACTTTACAAGGAGAAGCAAG
AACACAAAACCTCATTTTGGGCCACAAAAGCGACCCACAATTCAATAAGG
GAATAGCGAACGAATAGTTTGTTGACGAGATGAATTTGTGTGTTTATTAA
CATCGATCCGTaatagatattttgaaaaatggatAATTTATTTCCAAGGC
CCTCAAgctttacataaattattgtccGTTAAAGTAGCACGGACTTTCTG
CCTCTGATTAGATAAAGGAAGCGCTCTCagcgaccattaaattttcgaTT
TACAAAGGAATATTTTTACTTAAGTGGGTAGTTTGAAAACGTTTGGGTTT
TATTTTCTAGAATTAGAAATTTATATCTCAACTATAAAATGTTCCAactt
tgtatttctcaaggaaaattgTTATAAACTGTCAAAGGGGTATTTTTACC
AAATTCTAACCAGTTTTCGACAAAAATTTACGTGTTGAAACTTATTATAG
AGGAAACATATGAAATATCTGAGTACATTGGAAATTACATCAATTTGCCT
AAAAATCTCATCACGATGTTATCAATTTATTTCGagaagaaatgaaaatt
gaaacaaaaattaaGGAATTTCTTAAAGATGGAAAAAGAGTAAACTCAAT
AAAAACACGTTTAAGTTCTAGCTTTTTATCTAATGAGTGCTACAGCAGCA
GTGCTACAGAATCGCCAGAAAATTCTGAGTAAGATAATATAagaccccct
tctcacagacccggtagattATTTTTAGCCATTGGGGAGTGGGGCTAGAA
ATAACAGACAAAAATACGATTGGGATTGGGGATATTCCCATATGTTTCTA
AGGCCCTGACCATCGTGAATTTTAATATTTGtcacgtacaaaatataaat
ttctgcctgatgtagctCACAAAACtttggcatgttatacatattctgtt
aggccaactatccttgagtctgaaaatttaagaagcgcagagaaaaaatt
taatgaagaagaaaatgaagacttttgcggcgaagagtatttcaactttg
aagagcttattttggtcgaagaagaaatattttgaaaaaacttttgtggt
agatggtgtatcttttaccgaactaaaaatatattttcggaaattttttc
taaaagc
Run BLAST on NCBI

protein sequence of TCONS_00036254-protein

>TCONS_00036254-protein ID=TCONS_00036254-protein|Name=TCONS_00036254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MMKFNMKLKGTSNNSKPAKVKVPKIEINECKVKTKDHKKLENEMLQQAKE
AQLLLEQLLCEDRYDEFGRPRSNSLNATVENLILSKKVPNKATSKPRGSV
PTLTNIPRKFLIRNKNNSNDQSATSLPCSPKDNRRTKMSPLKFMRKYNTD
NSQTTSNECRSPKSKRTFEPKDVTAESSPSEAASSAKCTSYKQMNQEDEQ
DESQQNWEGESI
Run BLAST on NCBI

transcript from alignment at sc0001431:31700..43797-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036254 ID=TCONS_00036254|Name=TCONS_00036254|organism=Clytia hemisphaerica|type=transcript|length=12098bp|location=Sequence derived from alignment at sc0001431:31700..43797- (Clytia hemisphaerica)
AAAATATTAAAAAGATGTCAGATGACTTCTGGGATTGAGAAATTGGAAAT GAGTATCCTCCATGGAAAGTTTTGCAATTCAGCAACAAATTATCTTCAAG AAAGGTATTCAATGACCTCAAGAATTCTATATTTTTATCTTTGATAGCCG GAACTCGAGAATATCTTGCTTATTTTCGGATTTCCCAAAATTTAGTACTT GATCTCTTTTCTTTTTCTATGACCTGGATCGGTGGTATATTCCTGGGTAC TAAGTTCTTTTCATTTCATTAGGATGTTGGAAGGATAGAAGAGGAGTAAC TTCACATCCAGAACAGATTTTTAAAACAAACGATGATTTGCAATTTCCAC ATTTTCATGCATCCTACCCCGGGAAGACTTACCTTCTTATTTCAGAGGTA AGATGGCTTTTCTTCAGTATTCTTCAAGGAAAATTAGTTTTCTTAATTTC GCATACGATGAGTAATATATCACATTGTGTACTTTTCGAGTGGATGTGTG TTGCAATGTCATATTTTTATCGCTTTTTATGGTCACGAGAACGGCTCATT TTCTTAAAATAGAACTCAGTTACTTTATTTGCAAGGATTGAAAAGATTGT TCTGGTAGTAATTGAGAATCCACCGCAAAGGTCATTGACCACTGAAGAGT TCAAGATGACTCATCCTCCATTTATTTTACATGCTCAAAAACAAAACATA AAACCGTTATCAGTATTNTGAAAAGATTGTTCTGGTAGTAATTGAGAATC CACCGCAAAGGTCATTGACCACTGAAGAGTTCAAGATGACTCATCCTCCA TTTATTTTACATGCTCAAAAACAAAACATGAAACCGTTATCAGTATTTCA TGACGTACTAGCAAAAAAAGTTCACTTTTGTTTCAGAATGTTCTTAGAAA TCTTTCTGTAAAACAATAAAGGTCAACAATGACAAAGTGCTCCCCGAGGC CAAGTAGTATCAATCAATAATGACCTGTCAATAATCAAAGCGATAAACAC AGAAAACTTTTCCCACACAGATAAAAAGCCAATTAATTAAACATCAATAC CTGAAAACCAATTTAAAGGTACTTAATGAGTCAGGCGAGCTAATTCAAAA GTTACTTTCTTTGGTAACTATAGTGACCATCCAAACCACTTTATTTGTTG GAGAAAAGACATAAAATGAAGGTTTTTTGCCATCCTTAATATCGTAATTA TGGGAAAATGACAGCGGATTAAGTACTAGACGTACGAAAAATGTAGAAAA AGGATATGAATTTGTTTTTCGAAATTCAAATTAAGAAAGAAGTCAAAAAA TACAATAACAAAACTAGAGATATTTTTTTCGGTCAAGAAAAGACCACAAG GTGGTTAGGTACTGAAATAAATACAAATTTCAAAAATGTTCAAAGACTTA CATCATTTCAAAATACTAACTGTGTTTATTTTGAACCATCAATGTGGTAG CTCTATTGCGATACACGTTTTTTTTTATAAGAACATCCAAAAAATTTAAG CCTTGGGATGTTTTTAACTTTTCGAGTTTTAAGCCTAAAAATGTTCTTAA CATGTTCTCATTTTCGTCATTTTTTGAGTATTTTTGTCTATTTTCCTAAG AAATTGGGTGTTTTAGAGCCCACAAAGCCTTAAAATGTTCTTAACTTGTT CTTAACACTTAAGCTGTCGATGTTCTTATAAAGTTTAAAGTTCTTATAAA AAAACGTGTATATCGAAATGTTTTGAATACATGGAACCCACTCATTTGGT TCTTCTTAATCTACTCATCCAAATAACTCTTTGATTCACTGCTACAAAAC GAAGTAATTAAAATTTTAATTACCAAAACAATGATTGATGATATTTTTAT AAACAAGATGATTAAAAGGATATTTATGATATTGTTCGAAAGAGGCTCCT GGTGTTACTATTTTGTCGCCTAGCAACTGTGTTTCGTCAACAAACCACTC AAACACGTTTTCAACTTTCGCATTTAAGCTCGAGAAAGAATGATCTACAT TTTGAATGAGTTTTTTAAATCAGTTTAAAGTTGAAGTGATTATCAGATTT TCTAGCTTAAGAATGATTCCTTTGTGCAGTTTGATATTCTGAAAAAATGT GTCACGTTTATATTTTGTACAATCTTACTTAACATGTACAAAACAATCCT TATTTGATTTGAGGAGCTCCAATCGTGCTCTTGAAATTTTATTTTTAAAG TTCAGATTATCAGCAATACAGTGGAGTCTCCATAACTCGAACGCGCACGT GAAACCGAGATTTGTTCGACTTATTGAAAATTTGAGTTTAAAATTTTTTC GAAGGAAGTGAAAGATTAGGAACTTTCTTCAAGTTAAAGAGACATTCGAA TCTAAAGTCCAAATCTCGTTTCTCCTTTATCAAATTTCCAAACTCTCTTT GAAGTTGCCATGTACCGTCATGCTTGGAAAGCCCTGGTCATGAGGAGAAA GAGGCCTGTTCAGNACTCTCTTTGAAGTTGCCATGTTCCGTCATGCTTGG AAAGCCCTGGTCATGAGGAGAAAGAGGCCTGTTCAGGCCTGAACATCTTA GCAAGCAAGCCAAATCTTCTGAAAAAGCTCTACTGTTTTCTTTGGCTAAG ATGTAATCCTTGAAGTTGTCATCTTTCAGAAGGTGAATTCCTTATGTTTT TCTCTGAATGGAAGTCAATGAAAAACTAAAAATATATCATATATCTTCTC GTTTTCTTTTTGGAACATGCAGTTCTTCAGAAATATTATCATACAAGAAG GTACTCGCGATCGAAGTACGCAATGTATTCAACATCGTTTTGTGACGTCA TCACTACTCCACACGTCACATGCTTTCCAAGAAAGAAAGCATAGAAGCTG CAGGAACATGTTTCACTGCAGACCTTCGAGGAGGTAATTGCCAAGTAGAT ACAAGACGTCATCTGATGATGTCATTGCTTGATGATAAACGACGTTGTTT TCTCTCGGCGAGATAATGTTGTCTTACCAGGAAGATTTGGAAAGAAACTT CTAGTTTCGAATGTTGATTCATGATCGCGAAAAGTGAACATCAACACGAC AACAAAAAATAATCAGCGCTCTTCAGTTTGTGGTTCACCCGAATTTCTTC CTGATTTGCGGTTTCGTGTTTTTGTTTTTTGACAAGCATTTTGCTTTTTG TTGTCTTGAATTGGACTTTGACCGGAGCATCGCTTTGCTATCCAAGTCTA CCTAGAGCTAGATGACGAATTCTGATGCTTTGTTCAGTAAAGGAGTGCCC TTAGTGTCCTATCTTTTCTTTGTTATATCAGCGAGATGTGAAATAAAACT CTCCTTGGGTTTTCTTGTTATCTGTTAATCAAATTGAACATCGGAGGCTG AGGAATTCTTGACATATCTCTTTCAACTAAAAATACCATGTACAGGGTGT AAAAGAAGGAAAAAGGGGTTTGCAGAAAGTTCAAGTACACATGGGAGATG AGATGTCTTCAAAATTAGAAAAGTTAGCTTGGAATACGACGACTGTTCGA AAATCCCTTCGATTGATTTTGTTCGACGTTCGACGTTTCGTTTAATAAGG TAAATAACATCAAGAGCTTATTTTCTTCAAATACTTTCTATGGCTGTGAC ATGTTTAAGTTGACCTTGCACACAAAAAACCTCCCTATCTATCTATACTA CCAAAATATTCAAATATTGCAATCTGTGATATTTTTTTAAAATTTTCGCT AAAGTGGGTTTATTATCGGAAGTTGAAATTTCGTCCGTAAAATGAATATC GCCCCATCATACCGTTTCCTGATGCTGACAGTCTGAATTGCATGAATTTG CACTTTTGAGAAATCACAACTTCATCAACAAAATATTGTTTCAATGTTTC GGTGAAAGAATGGACAATCAAGCTAATGCAAATTGAAGTAAATGTTCACA GAAAGGCTAAAAGTGTTATGAGGTGTTGAATTTTTCAGAAAAACTTTACT CCCCCTGAATTTACATCCTTTTTAATTTTTTAACCTTGCGATATTCCACC TACGAAAAAGTAACAACATTTTTCGAATCGAAGAAAAGACACCCGGAAAA AAAATTAACCGAAAGAGACGTGATCTCATTTCGACGATGATGTCATTTTA CGGTTCCATCTTGAGTTACATATTTTCCATTGTTTTATAAACAATTGTCA TTATTACTGCACATTTCCACCTGCTTTAAAAATTTTGAAAATCAGTAACA TCTATTTAATAAGAATCTGAAAAATAATTTGAATGAATGTATGTAAGTTG TATAGTTTTCCTGTTCTTAGGCTTAAACACACGTGACTTCGCAATGATGC CTTTTTCCCTCGAAGTAAGATTTTCAAGAATCAAATGTTAAGGGTTACTT AAAGTCTTGTTATGGAATTCGACATTAAACTTAATTTTCAAATAAAAAAT CATTTCCCTTAAACGTGATATCGAAAGTTTCAAAAAGACCGCTTTCTGTT CAAAAGATTTTGTAATCAAGTTGACCCGGTCCGTTGCAAAATCATTTCCT GAGAAAATATTAAGGAATGTAATCATTATTTATCAATTGATTAATTAGTA GCATCCTTAATGGGGTTATCCCATGTCAGATTAGGTTAATTTGCTCTGAA AATCATTTATTAAGCTAATGTTACCCGTATCGCTAGTTTCTTATGGCTTT TTTGATTATCAATTAATTGACACGAANCCATTAATTAAGCTAATGTTACC CGTATCGCTAGTTTCTTATGGCTTTTTTTTATTGTCATTTAATTTAAACG TAAATACAAATCAAAGCAAGATTTCTCCTTTTCTCAAGCAGTACAAAAAT GCTGTCGTTCTACAAATTTTTTTTTTTTTTTTCCCCTCTTCGATCAGACT TTCATCTACGTACGCTTTTTTTTATAAGAATGGTGTAAACCCATTTTCAT CATGGATATTTTTAACTTTTTTGGGAAAATCATCCTAAAATATTCTTACA GCATTCTTAGGTTAGGATCCTAATTCAGACTAGATTTAACATTTAGTACA TACTTCTCAAGTATAAAATGGCATTTTTGTGAAAGAAGTGAGCCTTACTT GGGGGTAATTGGCAATTTATAATTGAAAATGCTCTGAAAATGGCATTCTT AGCTTGAGTAGCAAAATTCCATGATGATGATATTCTTAGCATATTCTTAA TTTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATTCTTATAA AAAAAGCGTGTATTTAAGAAATCCCTGTCTCTGGAACTTGATAGGGGCTT CAGTATTTGTTACCGTCTCTCCATCTTTATATAACATCCCTGTCTCAGTG ATCCGGTGAAATTTTGAAATCCATCGGGATGAACACACCTTTATATGAAT TTTCCCGAGGTATGGACAAACTTTCCACTTTCAGGCATTACTCTTGTGTG CTTAATTATAGGGGAAAATCACCTCCATATCACTTTATACTGACCCCCCC CCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATTTTGTT GATTTTTACCCATCCCTGCTTATTCCACCCCCCCCTTCTACAATTAAGCA CACAAAGAGTAGCAGGTCTGGTTTTCGGATTTTCTTAGAAATTTATGTAC TTTCTTTTTTACTTTGACTCAGAGTAAGATCATTAATCTCCCACTTTGAT CTGGGTTGAAAATGTCTGCTAATTTAAACCGGGTTTAATCATTTCCCACC AGAAACTTTTTTACCGGGTTTCTATTGGACTAAAAAATGAACGGGGAAAT GTTTTTAATTCGAAAATAGGGTATTTCAAATTTGTTTAATTATGTTTGTT CCTCATTTTTCATTAAATTTTACAACTCCTAGTAGCTTATTTTGTTTTTC TTTCCAAAATGGCCAACTGCTCCTGGCCTACTTCACTGGGCATCGTCAAT GCCAACAAAAATTACCAGAAAGAAATATCTAAGGCGTATTATACGAGACC TAATATTATGCCGTAACAATTATCATCTAATACCCATATTACGTACCATG AACTACTCTAGACTTTAAACTCATTAACCCTGATTTTGTAGGTCCAATCT CTGACATAATCTATCTTGTCTTACAGACAATTTCTAATTAAACACCCCTA TCTTACAGGCCCAGTGGAACCTCAGTGAAGATAAAAATTCATATTGAAAT CCCAATGGGTTAAAAAATACAGTGGGGATGGTTTTGGATTACAATTTTTG AAAATTGAATTTCGAATGGGGACGAAGTCAATTTCACAATGGGGCTGAAA TAGGGTATTTTCCCACCGGGGACGAAATTTTTGCCAAATTTTCCAGTGGG GCTGGGGTTCCAGTGGGTCTGCGGCATAATTAATTGAAACTAACAAATTC GAAGAAGCTTTTCAGTGCGCTTAGTTAGAATATTCTCAGTGTTTTCATGG TCCTTTTTAGATTACTCTGTAAGTGAAAATGTTCTTAGCTCGTCAGAGCC CCCATCAGATCTTAAAAATAAACTTTTTTAANTAGATTACTCTGTAAGTG AAAATGTTCTTAGCTCGTCAGAGCCCCCATCAGATCTCAAAAATAAACTT TTTTAATCTTATGTCCATATATATTTTGTACTTAAAAAGGGCGTGATCTT CAGTTACGGAAGCAAGGTGTGATCAGCGTGCTAGGGAAACTGGAAGACCA AATAAAAACCATCTTTTGGGCTGAATATTTTATCTATGATCACCTTCTAA ATCAAAATGTGAATAAAAGAGAGGTGTTCTTTTCCCTGTTCACTCTACGC AGTAGCGTTGAAGAAAACCATTCGTCTGCTCCCCTTTTTGCTTGATAAGG ACGCTGAGTGTTTGGGATAGGTTGATAATCTAACCCTTTGTTTCGAAAAA CTGAAATTATATTTGAAACTATGAAAACAAACTTGTACAAATAGCGATAA ATGAGATTTTCTCATATAATGGTTAAAAATTTCATCAAAGAAAGATTAAT ATGTCTATTGTTGAAGAAAGTCGAGCAGATGTTGGACCAAAAGTCTCTTC ATAGGGAAGACGACAACAAAGTTTGTAAAGTGAACCAAAATAGCCATGTT CACACTTCCTCGCTTAAAAAAACGGTGAGATGTTTAACGTTCGCGCAGTG GCTTTCTTTATGAGACAAACAGATTTCATTATGAAGGAGAGTGTAAAGTT ATACTTAGAGCTGTAGAATGTTTTGTTTCGAAGAAGAAGAAGAAAAAGAA GAAGAAGAGTATATAGGAGACCTGAATGAAAGACGAGCCCTTTCACAAAA ATAACAAGTAGAGAAAGTTGAGAAAGCGTCAGAGAGAGAGAGAAAGAGAC TGGAGCAGAGTACAGATTATTTGTCAAGAAAGTGGAGAAAACCTTGTAAA GCTCACTTCGACGAAAANGAGATTATTTGTCAAGAAACTGGAGAAAACCT TGTAAAGCTCATTTCGACGAAAAGAAGAACGTGAGCCATCAAAAGCTCAA AAAAAAAGAAATGACAGCAAAAGAAGAAAAAAAGGAACAGAAATAGAAAA AGAAGATGATTTATTTATAAGTGAAGAACCTAGCTTGTTGTTATCCACAC TCCAATCCTTACAACTTATACTTTCGTCGTCGAAAAGAACGCACAAAAAA GCAAAAATTGGATTTCTTCATATGTATATATTAAAAGTGAATAATAACAA TTAACGAAAAAGATTGATGAAGATTATGAAATAAAAGTTGGAATTCGAAT TTCTTGACTGAACTATTTTGATTTTGTAGTTGAAGGACTGCTACAGTCAA GAGATATGATGAAGTTTAACATGAAGTTGAAAGGGACATCCAATAATTCC AAACCAGCCAAGGTCAAAGTACCAAAAATTGAGATCAATGAATGTAAAGT TAAAACAAAGGACCACAAAAAGTTGGAAAATGAAATGTTACAACAAGCGA AGGAAGCTCAGCTTTTGTTGGAACAATTATTATGCGAAGGTGAGTCATCG ATTTTCACCTATGGAACATTTTATGAATTTGTAGGTGACGGGTAGGTGAA TGAACTCGGTCGAGTGGCCACCCCTAAGTTGACATTTAAACCACTGTTTC GATGTGTACATGTACTACACCCCTATCTCGGCATTAGTACCCCTCCTCTG TTATTTAGATAGCATATTTACTCACCAAGGATAAGAGGAGACTTCGAGAT CATGCTTCAATTTTTTTCCGTTTTTATGATTGATATCCAGAAAATGACAG CCCTTGATTTATGTCTGTGAATTTAAATATTGGAAAAAGTCTACTATGAT CTACCATAGAGACCAATTTTTCAAGGACATGGGTATGGGATGTTATATTA TACCAAGTGAAAACTTTTGAAGCCTCTGATAGAGAGAATTATCAACTGCC AGAGATGGCAGAGAAGGTAATCTATACCCATACATAATCACAACTTAGAA ATCGAGGCTCCGCAGTAATTTCGTTGCATTATTTCTTCAAATTATTTCCT AATGTTCTGAACGATAAGATCTGCAAAAAACAACTTAAAATTAATTTCTT ACGTAATTTTAGTCTTCAATATTCTATTCTTATTTTGCTGACGTCAGCCA CCCACGAAGAAAGGATTTACGTCAAAAATGCGTGTGCTTTATAAAATAAT TTTGTGAAGAATCGAAGAAGAGAAATTGTTTCAACTTCTTTTCATCTTCA AAAAAAATGAAGAAAGAAACGGGACTGAAATAAGATATCGTTTTCTATTG AGAAAAGATAAAGTTGGCTGAAAAAAATGAATGTAGGAATGAAAAGAAAA GGGAATATCATTTTGATAAAAGTTCTGAAAGTAAGAACACAAAATTTATG CTAGACTGAGAATATTGAACTTTTGTGTTCATCCTTGGACAATATCTTGG ACTGAGGTCGACAATTTCGAAGTGTCTAAGTGTGAACTTGTCAAAAAATA AAAATAATAATAAAAAATTGATTAGAAAAGATTCCATTTGCTTGATTTCT TTTTGCTTTGTATTCTAACAGTGTGATGAAACTTAAAGGTCCTTCAATAA GGGTAAATTTTATCATCATATGAAATTTTCAGCTTGAGTTCAATGAAAAT CAAATCAACTGATTTTGAAATAACATCAAAATATTTTGGAAATAATTTCC GGTCGGTTCATCAAAATATCCTCTCCATTTCATCTCCATAGCAACAGAAA CATTTCCCACCTTACGCATTTCGTTGAAAATTCTTCACAGTGTTACAGGT GTGGTTTATTGAAAATGCGACTTCCGCCCCTGTTTCAACCCCTGTCTCAG TGACCATCCGATCAGAATTTTAAGTCAGCGGGGATGGATAATCCTTTTTG GTAAAGGGTATGGTCTTAAAGGGACATAACACTACTTGCGAAATTTGTAA ACAAACTGTATGCAGCGGATACAAAATCAAAACAAATGTCACATGTCAAA ATAAAAAATCAAACCAAATATGGCTAATTTTCATTGTTCAATTGTTTTAC AAGTTTGTTTTGTACACTTGATTTTAATTGTTCTCTTTAATGACACGTGG TTCGCGCAATGTTTACCATAAATAACGTTATTTTATTACAGAAAGTTCCA ATGGGGATGATCAATTTTTTACAATGTAGAATAAATAGTAATGGAATGTT CTTAGGATGTTTTTCTCACCCGGGACAAAGCTCGACCTTTTCTAATAACG AGGAATTTTTTTGGGTGATTTTGGGATAAATCTCGTCACAATGCTCGCTC AAAATTATGGCTTTTTATCAGTCTTTTTCTTGAAGTAGATCAAAAAGTTG AAATTTTTTACTTTCTTTGGCACAAAGACGACATGAGAATGGCATCTAAG AGAGAGCCTAAGTGTTGTTTTGGCTTTTCTTTCCAAAGTCTTAAAAAATA TACATTTTTGTTTCTTCAAATTCTTTTATATACTGATGGCTAAATAAATG CATGACCATTAAGTTTATAGTCCCCAAAGGGCAAGAAAGGAATATCTAAA CTCTCTCAAGGAATAAAAAGTGAAGCTTTAAGATTTGCGCCGCATTTAGA ATTACGGATTGAATCAAGTCCTTTCTTTGTTTTCGCGCGACATATTTTTC GATCCGACGATAGGTTTTACTTTTAATCTGGCGTTTGTGTGAAAACCACA CGTTTTGGATGGAAAATTAGCGGAGGGGGACACTTATTACCCGAGAGTAT TCTTGTGGGTTTTAAGGGTTATTTAGATTGTAACTTGTTTTTTGAAGCAC TTAACCACTTAGGTCTAATTGGCTTATCATAAAGCAAGTAACATTTCAAG AAAGAAAGTTTAAAAAAGTTGCGAGGGTGAATTTTCGGCTAAATTTTCCC TAGAATGTAGAGGCCCAATTATTAAGGGCTTTATTATGGCCCATGGTCAA ATGCTATTAACAATTTCATTCATTTTTCAGATCGTTATGATGAATTCGGG AGACCTCGATCGAACTCACTGAACGCAACAGTTGAAAATTTGATTCTTTC CAAGAAAGTTCCAAACAAAGCGACCAGCAAACCGCGTGGTAGTGTGCCCA CACTCACCAACATTCCCAGGAAATTCTTAATACGTAACAAAAACAACTCC AACGACCAATCCGCAACATCTTTACCTTGCTCACCCAAAGATAATCGTCG CACCAAAATGAGTCCTTTAAAATTCATGCGTAAATATAATACCGACAACT CACAAACGACGAGCAACGAGTGCCGATCACCGAAATCTAAACGAACATTC GAACCGAAAGACGTGACTGCAGAGAGCTCGCCCAGCGAGGCGGCTTCGAG CGCAAAATGTACTTCTTATAAACAAATGAACCAAGAAGATGAACAAGATG AGAGTCAGCAAAATTGGGAAGGGGAAAGCATATAGTTAAGTTGAGAGAAA GTGTTCAAATCCTTTAAAAGGACTTTACAAGGAGAAGCAAGAACACAAAA CCTCATTTTGGGCCACAAAAGCGACCCACAATTCAATAAGGGAATAGCGA ACGAATAGTTTGTTGACGAGATGAATTTGTGTGTTTATTAACATCGATCC GTAATAGATATTTTGAAAAATGGATAATTTATTTCCAAGGCCCTCAAGCT TTACATAAATTATTGTCCGTTAAAGTAGCACGGACTTTCTGCCTCTGATT AGATAAAGGAAGCGCTCTCAGCGACCATTAAATTTTCGATTTACAAAGGA ATATTTTTACTTAAGTGGGTAGTTTGAAAACGTTTGGGTTTTATTTTCTA GAATTAGAAATTTATATCTCAACTATAAAATGTTCCAACTTTGTATTTCT CAAGGAAAATTGTTATAAACTGTCAAAGGGGTATTTTTACCAAATTCTAA CCAGTTTTCGACAAAAATTTACGTGTTGAAACTTATTATAGAGGAAACAT ATGAAATATCTGAGTACATTGGAAATTACATCAATTTGCCTAAAAATCTC ATCACGATGTTATCAATTTATTTCGAGAAGAAATGAAAATTGAAACAAAA ATTAAGGAATTTCTTAAAGATGGAAAAAGAGTAAACTCAATAAAAACACG TTTAAGTTCTAGCTTTTTATCTAATGAGTGCTACAGCAGCAGTGCTACAG AATCGCCAGAAAATTCTGAGTAAGATAATATAAGACCCCCTTCTCACAGA CCCGGTAGATTATTTTTAGCCATTGGGGAGTGGGGCTAGAAATAACAGAC AAAAATACGATTGGGATTGGGGATATTCCCATATGTTTCTAAGGCCCTGA CCATCGTGAATTTTAATATTTGTCACGTACAAAATATAAATTTCTGCCTG ATGTAGCTCACAAAACTTTGGCATGTTATACATATTCTGTTAGGCCAACT ATCCTTGAGTCTGAAAATTTAAGAAGCGCAGAGAAAAAATTTAATGAAGA AGAAAATGAAGACTTTTGCGGCGAAGAGTATTTCAACTTTGAAGAGCTTA TTTTGGTCGAAGAAGAAATATTTTGAAAAAACTTTTGTGGTAGATGGTGT ATCTTTTACCGAACTAAAAATATATTTTCGGAAATTTTTTCTAAAAGC

Coding sequence (CDS) from alignment at sc0001431:31700..43797-

>TCONS_00036254 ID=TCONS_00036254|Name=TCONS_00036254|organism=Clytia hemisphaerica|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0001431:31700..43797- (Clytia hemisphaerica)
ATCGTTATGATGAATTCGGGAGACCTCGATCGAACTCACTGAACGCAACA
GTTGAAAATTTGATTCTTTCCAAGAAAGTTCCAAACAAAGCGACCAGCAA
ACCGCGTGGTAGTGTGCCCACACTCACCAACATTCCCAGGAAATTCTTAA
TACGTAACAAAAACAACTCCAACGACCAATCCGCAACATCTTTACCTTGC
TCACCCAAAGATAATCGTCGCACCAAAATGAGTCCTTTAAAATTCATGCG
TAAATATAATACCGACAACTCACAAACGACGAGCAACGAGTGCCGATCAC
CGAAATCTAAACGAACATTCGAACCGAAAGACGTGACTGCAGAGAGCTCG
CCCAGCGAGGCGGCTTCGAGCGCAAAATGTACTTCTTATAAACAAATGAA
CCAAGAAGATGAACAAGATGAGAGTCAGCAAAATTGGGAAGGGGAAAGCA
TATAGATGATGAAGTTTAACATGAAGTTGAAAGGGACATCCAATAATTCC
AAACCAGCCAAGGTCAAAGTACCAAAAATTGAGATCAATGAATGTAAAGT
TAAAACAAAGGACCACAAAAAGTTGGAAAATGAAATGTTACAACAAGCGA
AGGAAGCTCAGCTTTTGTTGGAACAATTATTATGCGAAGATCGTTATGAT
GAATTCGGGAGACCTCGATCGAACTCACTGAACGCAACAGTTGAAAATTT
GATTCTTTCCAAGAAAGTTCCAAACAAAGCGACCAGCAAACCGCGTGGTA
GTGTGCCCACACTCACCAACATTCCCAGGAAATTCTTAATACGTAACAAA
AACAACTCCAACGACCAATCCGCAACATCTTTACCTTGCTCACCCAAAGA
TAATCGTCGCACCAAAATGAGTCCTTTAAAATTCATGCGTAAATATAATA
CCGACAACTCACAAACGACGAGCAACGAGTGCCGATCACCGAAATCTAAA
CGAACATTCGAACCGAAAGACGTGACTGCAGAGAGCTCGCCCAGCGAGGC
GGCTTCGAGCGCAAAATGTACTTCTTATAAACAAATGAACCAAGAAGATG
AACAAGATGAGAGTCAGCAAAATTGGGAAGGGGAAAGCATATAGATGATG
AAGTTTAACATGAAGTTGAAAGGGACATCCAATAATTCCAAACCAGCCAA
GGTCAAAGTACCAAAAATTGAGATCAATGAATGTAAAGTTAAAACAAAGG
ACCACAAAAAGTTGGAAAATGAAATGTTACAACAAGCGAAGGAAGCTCAG
CTTTTGTTGGAACAATTATTATGCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021320XLOC_021320Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036254-proteinTCONS_00036254-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036254-exon-sc0001431-1575043694:43694..43797TCONS_00036254-exon-sc0001431-1575043694:43694..43797Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1575043694:43401..43525TCONS_00036254-exon-sc0001431-1575043694:43401..43525Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1575043694:35759..35968TCONS_00036254-exon-sc0001431-1575043694:35759..35968Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1575043694:31700..33317TCONS_00036254-exon-sc0001431-1575043694:31700..33317Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1510915933:43694..43797TCONS_00036254-exon-sc0001431-1510915933:43694..43797Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1510915933:43401..43525TCONS_00036254-exon-sc0001431-1510915933:43401..43525Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1510915933:35759..35968TCONS_00036254-exon-sc0001431-1510915933:35759..35968Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1510915933:31700..33317TCONS_00036254-exon-sc0001431-1510915933:31700..33317Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1491911889:43694..43797TCONS_00036254-exon-sc0001431-1491911889:43694..43797Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1491911889:43401..43525TCONS_00036254-exon-sc0001431-1491911889:43401..43525Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1491911889:35759..35968TCONS_00036254-exon-sc0001431-1491911889:35759..35968Clytia hemisphaericaexon
TCONS_00036254-exon-sc0001431-1491911889:31700..33317TCONS_00036254-exon-sc0001431-1491911889:31700..33317Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001431supercontigsc0001431:31700..43797 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.07664 1.99458 0.529475 0.269814 5.25463 3.92362 33.1282 33.1973 19.4109 18.6688 17.5386 19.6231 4.48345 2.83183 0.566863 0.831558 5.87093 7.31903 8.04894 6.0447 5.74415 3.30098 3.44199 4.1175 9.50722 8.48599 2.17125 3.22051 1.87864 2.5967
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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