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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036250 ID=TCONS_00036250|Name=TCONS_00036250|organism=Clytia hemisphaerica|type=transcript|length=432bp
ACATTGTCTTTCTGCTTTTCTCTTACCACCAACATGTGGTTGGCTCATCC
GACGCGCAAAAAACTCTACTCGTTGAATGGCTACCCAAAATCTCGCCAGC
AACACGATGCGACCATCGATAAGTTAAAAGCAGAAACAGAAACGCCCATC
AAGCCTTCgctcaaaattttgttgatcAGAGGCTTCATCATGGTTGTCTA
CCTGTTGCTAGGTGCTCTCGTCTTTCGTGCTCTGGAACACGAGGACGAGG
ACCCTAATGCTAGAGATACACTAGCCTTTGAGCGCAAACAATTGCAACTA
GAGTTCAATATCAGTGATGTGAGGCTGAAACGGTTTGAAGATCTGGTTCG
AAAAAGGAGACAAGAACCAAAAGATTGGGATTATTACCAATCACTGTATT
TTGCGTCCACTGTCACTACAACTATCGGTTTG Run BLAST on NCBI transcript from alignment at sc0001431:18727..21126+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036250 ID=TCONS_00036250|Name=TCONS_00036250|organism=Clytia hemisphaerica|type=transcript|length=2400bp|location=Sequence derived from alignment at sc0001431:18727..21126+ (Clytia hemisphaerica)
ACATTGTCTTTCTGCTTTTCTCTTACCACCAACATGTGGTTGGCTCATCC
GACGCGCAAAAAACTCTACTCGTTGAATGGTAAGGCTCTTTGGTTTAATG
AGCTGTTTACATGATTGGGTTTGATCCATCGCTTCGTTTCTTTGTTTGTT
CGTTGTGCTTTTCTTGCAGATCTTCTTAATAATCTGGTCATTTGTGGCAA
GCTTTTTTCGCTATTAGTGGAGTTGGATTGGTAGAGATTTTTTGAACAGT
CTTTTATAATGGTGGATCGAAATAAGAGAAACAGCTTCGATGCCAATTCT
TCCATCTCTAAGAAAGTTTCAAAAGTGAAAGTGTCATAATTAGTCACAAA
AATCCTTCATTTCTTTTTCGGTTTAACTTTCGAAAGATATAAGGCCTTAA
AACGGTGAGTGAGTGATAATAACCCAGGAATAAAATCGTACCACTTTGGA
ACCGTTTCCAAAAAGTTTTCGATAAAGCTTTGTATAACTTTATCATAATT
TTAACAGTCACTTTTAATTGACACCTTATCTACTTTTGGTCTTTTTTGAC
ATTGGCTCTTTTTGCAAAATGTGTTGTTTGTTTGAATTGAACACGAAGGG
TGCTATCATTCCCCTTGGAAGATGGCTTTTTTTGTTAACCAAATGAATGA
TGGGAGcaaaaagataatattttttcttgtcTTGTAAAATAACAGAATAT
TATGGGATAATATCTCGTTCAAATTACAATTAAAACACTCCAACATTTAT
TTCTACTCTTTTCACACTTGGTTGATagggaaaatatattttattgaaGA
TAGGATGAAGTATTCCTCTCtcttttctctcttcttttctCATCACGTGA
TACGAGGAAAAGATATTTTATACTATCCAACGAACACAGGCTCTCTACCT
CCCCCCGCCAATTGGGAGGCTCacttcgaatgtttttttttacctaTGTC
CATATCACCAAAACAGTGAATGGCAGTAGACCAAAGGGGCGCAAGATTTT
TTGATATCataaatagataattacagtgccATAAAACCAGccctcctaca
caaattttgcgtccATCTTGTCTACGCTAATGAACggggtttatttgatt
attgcTTTCAATTGGTTGTTTTTCGATCTCATTTTGCCTGCTTAATCTAA
AGTGCCTATCATCACTAAATTTTGCTTATCGTTTGCCATTTTCTGGCAGT
GCCTTGGATATTTCTTTCACTCTTCAACGGCCTAAACTGAAGTATTGCAG
TGGTTTAATAAATTAGTTATACCATCTATCTATGCAATTACTAACCATAA
CCCTTCCTACCCAAACAACGACAacattttccttatttttcttgACACCC
ATCCTGGCTtgaaaggcggacacttctgattagcggacaaaatatttttt
cccggccgTTTTCTAGTCAAATCCTTATTAAAAAGTctccaaaaggcgga
cactcaattagcggacacctCCATTTAGCGGACAAAACTTTTTGCACAGA
ATGgtcaaaaacttgttttttccctccaattagcggacaccgaGGAAAAC
ATAGTTTCAGACATTCAGATACAAGTAATAAATCATTTTAAACCATTTAT
TTCAAGCATTTTATTTCTTCCAAATTTTGTTTACAAAGATTCAGTTTTTC
CATTACCCAGTTGACAAGCGTTCCTGGACCAGTAAAACAGTAAATGACTG
GCACTTCAAGTCCATAGCCACCTCCCCTGTTCactattttgttattttta
gtatttttagactttttttgaacgattgaaaaaaagtattttgttgTGTT
TAAATAACTTTTCTCGAGTCTTTTCATGTTCCTATATCTTTAGGGAAAAC
CATAATTTCATTTTTGCGACCCCCTAGTACGGTTTAATTTCGAAATTCGT
GCCTGAAACTCAAAACCCTCCAAAAGGTGgacacctctaattagcggaca
ctaaacCGATTCCCCGATGGtatccgctaattagaggttccactgtatca
ACTTTTACTCGATTTtatgtttgaaaaatgatttattttgctTTCAGGCT
ACCCAAAATCTCGCCAGCAACACGATGCGACCATCGATAAGTTAAAAGCA
GAAACAGAAACGCCCATCAAGCCTTCgctcaaaattttgttgatcAGAGG
CTTCATCATGGTTGTCTACCTGTTGCTAGGTGCTCTCGTCTTTCGTGCTC
TGGAACACGAGGACGAGGACCCTAATGCTAGAGATACACTAGCCTTTGAG
CGCAAACAATTGCAACTAGAGTTCAATATCAGTGATGTGAGGCTGAAACG
GTTTGAAGATCTGGTTCGAAAAAGGAGACAAGAACCAAAAGATTGGGATT
ATTACCAATCACTGTATTTTGCGTCCACTGTCACTACAACTATCGGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036250-exon-sc0001431-1491911889:18727..18805 | TCONS_00036250-exon-sc0001431-1491911889:18727..18805 | Clytia hemisphaerica | exon |
| TCONS_00036250-exon-sc0001431-1510915933:18727..18805 | TCONS_00036250-exon-sc0001431-1510915933:18727..18805 | Clytia hemisphaerica | exon |
| TCONS_00036250-exon-sc0001431-1575043694:18727..18805 | TCONS_00036250-exon-sc0001431-1575043694:18727..18805 | Clytia hemisphaerica | exon |
| TCONS_00036250-exon-sc0001431-1491911889:20774..21126 | TCONS_00036250-exon-sc0001431-1491911889:20774..21126 | Clytia hemisphaerica | exon |
| TCONS_00036250-exon-sc0001431-1510915933:20774..21126 | TCONS_00036250-exon-sc0001431-1510915933:20774..21126 | Clytia hemisphaerica | exon |
| TCONS_00036250-exon-sc0001431-1575043694:20774..21126 | TCONS_00036250-exon-sc0001431-1575043694:20774..21126 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001431 | supercontig | sc0001431:18727..21126 + |
Blast
The following BLAST results are available for this feature:
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