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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036205 ID=TCONS_00036205|Name=TCONS_00036205|organism=Clytia hemisphaerica|type=transcript|length=276bp
attcagacCCTTGTCCGTGATACTCTGAAGGAGGAATCTGGGAAAGAAGG
TTTTAAACCTTGGATATTGACAGAAACGAAtcCATTCACTGAAGCAAATA
GAGAATTGTCCAAACGAATCTTGGAACTGGTAAAAGGCACAAGCCCTGAA
ACTTCATCTGAAGAAATCACAAATGCAATACACATTCGTTTCAAGTCCAT
TAGAGACACAAATCGGCGAAGAGGGAAGAATCCCAACTACAAAAAGGATA
TGGCCAAAAAATCACGTAAAGATCAG Run BLAST on NCBI transcript from alignment at sc0001426:46084..48192- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036205 ID=TCONS_00036205|Name=TCONS_00036205|organism=Clytia hemisphaerica|type=transcript|length=2109bp|location=Sequence derived from alignment at sc0001426:46084..48192- (Clytia hemisphaerica)
ATTCAGACCCTTGTCCGTGATACTCTGAAGGAGGAATCTGGGAAAGAAGG
TTTTAAACCTTGGATATTGACAGAAACGAAGTGAGTATAATTTAAACTAA
ATTGAAAGGGAATTGGTCCCGGGAGGGGGGGTACTAGGGCAAGATGGGTT
ACAGGGATGCTCCGCTGGTCAGGGTACCTTATTTAACCTCCACGAGTCCC
AGGTAGGTTTGCAAAAACACCAAAATAGAAAAATCAGTCCCGCGTAGGGT
GCCTATTTTTGGAAAATTTGGGGAAAAAGTAGAAAATTTGAGAAAATTTT
GGAATTTCAGTCCCATTCAGGGTCACTTTTTTCGCACATTTCGAGTCCCC
CGTAGGGTGCCTATTTTTGGAAAATTTGGGGAAAAAGTAGAAAATTTGAG
AAAATTTTGGAATTTCAGTCCCATTCAGGGTCACTTTTTTCGCAAATTTA
GAGTCCCACATAGGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGCCG
GTCGACAATGGTAGTACCCCCCCCGGGAATTGGTTTACCAAATTCTGGCC
TTTAAGAAAAGCACCAAATGATTATTTAGGAACAAATTCAATAGGCAGTC
CCAATCTCCTATTTGATTTGCACGTCTTTCAATAAGAGGTGTGTGTTCGT
CAATCTTGTATGGTGAGCAGAAAGTTATGTGCCTGAATTATTATATTATG
ATTCTGTAATATGATTTCTATAAAAAATTATGCGCATATTTCGTAAAGAT
TTCTTGCATTTCATGCATGCTATGTTCATTCACTACATGGATGTTGTGTC
ACTCCTACTTGTTGAAAAGCCTGCTTTGATTACCACTATGCCTATAAAAG
TTAAATTTTCATTTTAGTCCATTCACTGAAGCAAATAGAGAATTGTCCAA
ACGAATCTTGGAACTGGTAAAAGGCACAAGCCCTGAAACTTCATCTGAAG
AAATCACAAGTAAAGACTTGAATTTATTCTATGATTTTTTTAAATAGGAG
CCTGTGAAAGCATGCTTATAAGAGGGTGGCACTTAATGGAGGAAATATAC
CGTCAATTAGGGTTACTTTCATAGGCAGGGGGTAACTTTCATCAACTCCA
AACAGCAGATTTTTCTGGTCTGTTATTTTTAATTGCCAGACGATCTCAAT
CGAATGGAATCGACAATCAAACCAAATCGAACGCAATCGAATCTCAATCG
AACGTCAAAATTCTGAGTAATATTCGATCGGTTTGATTGTTGTTTGACTG
CATTCGATTATCGTTCGATTGCGTTTAACATAAAGCAAAGAAGAGTCTTT
GACGCCCTTTGATGTCCCGTCGGGATCAACTACCATAAGAGTTATATTAG
GGAACTCAACTGTAAGTAAGGCAGAATTCTGTAATCCAATCATCCGAACG
CCATCAAACATCAATCGAACATCAATCTAACGCAATCGAATATCAATCGA
ATCTGAAAATTGCGGCAATTTTCGATTGAGATTCGATTGCGTTTAACAAT
CGAATTTCAATCGGTGGATTGCGTTCGATTTGGTTTGACTGGTTCGATCG
TCGATTCCGTTCGATTGAGATTGTCTGGTAATTGAANTGCGTTCGATTTG
GTTCGATCGTCGATTCCGTTCAATTGAGATTGTCTGGTAATTGAATGTAA
ATAGAATGCAAACAAGTTGTAAATAAGTACTGTGTTGTTTTTCTTTACTT
TTACAAATTGCAGACCAGAAAAATCTGCTGTTTGAAACTGATGAAAGTTA
CCCCTCATTTATGAAAGTAACCCCGATTGACGGTAGTACTGTCTAAACAG
GCAACCCTCACACCAGACATCCACATTCCAACCTATTAAGCTATTTTGGG
TCTGACTTCAAAGATCTTTCTTTTGATAGCCTATTTTCGAGCTTTTATCC
TTGGCTCAACAAAGTTGATTCACTTTCCAAATATATTTTTTTCTTGCATT
TTACTTCCGACCAAATCAGTCAGTCTGTATCATGATTTTAATTTTATTTA
TTCAGATGCAATACACATTCGTTTCAAGTCCATTAGAGACACAAATCGGC
GAAGAGGGAAGAATCCCAACTACAAAAAGGATATGGCCAAAAAATCACGT
AAAGATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036205-exon-sc0001426-1575043694:48113..48192 | TCONS_00036205-exon-sc0001426-1575043694:48113..48192 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1575043694:47234..47325 | TCONS_00036205-exon-sc0001426-1575043694:47234..47325 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1575043694:46084..46187 | TCONS_00036205-exon-sc0001426-1575043694:46084..46187 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1510915933:48113..48192 | TCONS_00036205-exon-sc0001426-1510915933:48113..48192 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1510915933:47234..47325 | TCONS_00036205-exon-sc0001426-1510915933:47234..47325 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1510915933:46084..46187 | TCONS_00036205-exon-sc0001426-1510915933:46084..46187 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1491911889:48113..48192 | TCONS_00036205-exon-sc0001426-1491911889:48113..48192 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1491911889:47234..47325 | TCONS_00036205-exon-sc0001426-1491911889:47234..47325 | Clytia hemisphaerica | exon |
| TCONS_00036205-exon-sc0001426-1491911889:46084..46187 | TCONS_00036205-exon-sc0001426-1491911889:46084..46187 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001426 | supercontig | sc0001426:46084..48192 - |
Blast
The following BLAST results are available for this feature:
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