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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036204 ID=TCONS_00036204|Name=TCONS_00036204|organism=Clytia hemisphaerica|type=transcript|length=554bp
atgaagaagaaaagctGGATGATTTGTTGATGGGTTATTCAGATTATGAC
CAAACagACGATGAAGTTGATGACGTAGTTGATGTTGTTGAAAACAAACC
CAGTGACGGTACACTACCGCCATCAGTTCCACCGCAAAGCGCGGCTTGCT
CAACAGACTTCACAGAAGATGATAATGAAGCAAAAACATCTGAATTTTCA
ATATACTATGACCAGCAAAGTAATACAATAATGGAAGAACTACCATCCAA
TACACTAATAAGTGATGAGATCCACCTTGAAGCAGCTGATATCTTAATGG
AAAACCCAACAGCAACTGAAAACAACAATCATCGTATTGAACGCATTGTA
CCGTCATCGCCAAAGGATGCTGATGAAACATCGCTATCAGATAATGAACC
CTGTTCTTCTGAAAGAGCTGAAGTAATGTTTATTGATGATGAAAGTGTGT
TAGAACACATATCTAATTACAGAGGAAAACAAAAAGCTGCTAAAAGAGAC
ATCCGCAAAAGGGAAACTAAGGTAACCCCCCCAGTTGTAAAAGAGTCTGC
TGCG Run BLAST on NCBI protein sequence of TCONS_00036204-protein >TCONS_00036204-protein ID=TCONS_00036204-protein|Name=TCONS_00036204-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
EEEKLDDLLMGYSDYDQTDDEVDDVVDVVENKPSDGTLPPSVPPQSAACS
TDFTEDDNEAKTSEFSIYYDQQSNTIMEELPSNTLISDEIHLEAADILME
NPTATENNNHRIERIVPSSPKDADETSLSDNEPCSSERAEVMFIDDESVL
EHISNYRGKQKAAKRDIRKRETKVTPPVVKESAA Run BLAST on NCBI transcript from alignment at sc0001426:8607..9491- Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036204 ID=TCONS_00036204|Name=TCONS_00036204|organism=Clytia hemisphaerica|type=transcript|length=885bp|location=Sequence derived from alignment at sc0001426:8607..9491- (Clytia hemisphaerica)
ATGAAGAAGAAAAGCTGGATGATTTGTTGATGGGTTATTCAGATTATGAC
CAAACGTAAGTTTGTTTTTGACGGATTTCTTCGGCCGCGCAGTTTCTTGA
ATCCTGAAAACCTTTATTGAAATGTTTACTTATTCACAATCAGAAGCATA
TGTACTTGTTTTTATTCTTGCTGGGATACTAGGGATCATGTTGAAACCTA
AAGTGTTCTTATACAACAACTTTTAAATATTTTAGAGACGATGAAGTTGA
TGACGTAGTTGATGTTGTTGAAAACAAACCCAGTGACGGTACACTACCGC
CATCAGTTCCACCGCAAAGCGCGGCTTGCTCAACAGACTTCACAGAAGAT
GATAATGAAGCAAAAACATCTGAATTTTCAATATACTATGACCAGCAAAG
TAATACAATAATGGAAGAACTACCATCCAATACACTAATAAGGTATAGTC
TCTGATTTCAAACTCAAGCGCGACATGGCGCTTTCCGTTACACGTGTAAT
TATGAATATTTATTTTCCACATTTTGTTTATGAATAAATTTAAATAAAGT
GAATAATAAATTATTAAACCTAGATAATTCTTTGTTCTTTTAGTGATGAG
ATCCACCTTGAAGCAGCTGATATCTTAATGGAAAACCCAACAGCAACTGA
AAACAACAATCATCGTATTGAACGCATTGTACCGTCATCGCCAAAGGATG
CTGATGAAACATCGCTATCAGATAATGAACCCTGTTCTTCTGAAAGAGCT
GAAGTAATGTTTATTGATGATGAAAGTGTGTTAGAACACATATCTAATTA
CAGAGGAAAACAAAAAGCTGCTAAAAGAGACATCCGCAAAAGGGAAACTA
AGGTAACCCCCCCAGTTGTAAAAGAGTCTGCTGCG Coding sequence (CDS) from alignment at sc0001426:8607..9491- >TCONS_00036204 ID=TCONS_00036204|Name=TCONS_00036204|organism=Clytia hemisphaerica|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0001426:8607..9491- (Clytia hemisphaerica)
TGATGAGATCCACCTTGAAGCAGCTGATATCTTAATGGAAAACCCAACAG
CAACTGAAAACAACAATCATCGTATTGAACGCATTGTACCGTCATCGCCA
AAGGATGCTGATGAAACATCGCTATCAGATAATGAACCCTGTTCTTCTGA
AAGAGCTGAAGTAATGTTTATTGATGATGAAAGTGTGTTAGAACACATAT
CTAATTACAGAGGAAAACAAAAAGCTGCTAAAAGAGACATCCGCAAAAGG
GAAACTAAGGTAACCCCCCCAGTTGTAAAAGAGTCTGCTGCGAGACGATG
AAGTTGATGACGTAGTTGATGTTGTTGAAAACAAACCCAGTGACGGTACA
CTACCGCCATCAGTTCCACCGCAAAGCGCGGCTTGCTCAACAGACTTCAC
AGAAGATGATAATGAAGCAAAAACATCTGAATTTTCAATATACTATGACC
AGCAAAGTAATACAATAATGGAAGAACTACCATCCAATACACTAATAAGG
AAGAAGAAAAGCTGGATGATTTGTTGATGGGTTATTCAGATTATGACCAA
ACTGATGAGATCCACCTTGAAGCAGCTGATATCTTAATGGAAAACCCAAC
AGCAACTGAAAACAACAATCATCGTATTGAACGCATTGTACCGTCATCGC
CAAAGGATGCTGATGAAACATCGCTATCAGATAATGAACCCTGTTCTTCT
GAAAGAGCTGAAGTAATGTTTATTGATGATGAAAGTGTGTTAGAACACAT
ATCTAATTACAGAGGAAAACAAAAAGCTGCTAAAAGAGACATCCGCAAAA
GGGAAACTAAGGTAACCCCCCCAGTTGTAAAAGAGTCTGCTGCGAGACGA
TGAAGTTGATGACGTAGTTGATGTTGTTGAAAACAAACCCAGTGACGGTA
CACTACCGCCATCAGTTCCACCGCAAAGCGCGGCTTGCTCAACAGACTTC
ACAGAAGATGATAATGAAGCAAAAACATCTGAATTTTCAATATACTATGA
CCAGCAAAGTAATACAATAATGGAAGAACTACCATCCAATACACTAATAA
GGAAGAAGAAAAGCTGGATGATTTGTTGATGGGTTATTCAGATTATGACC
AAACTGATGAGATCCACCTTGAAGCAGCTGATATCTTAATGGAAAACCCA
ACAGCAACTGAAAACAACAATCATCGTATTGAACGCATTGTACCGTCATC
GCCAAAGGATGCTGATGAAACATCGCTATCAGATAATGAACCCTGTTCTT
CTGAAAGAGCTGAAGTAATGTTTATTGATGATGAAAGTGTGTTAGAACAC
ATATCTAATTACAGAGGAAAACAAAAAGCTGCTAAAAGAGACATCCGCAA
AAGGGAAACTAAGGTAACCCCCCCAGTTGTAAAAGAGTCTGCTGCGAGAC
GATGAAGTTGATGACGTAGTTGATGTTGTTGAAAACAAACCCAGTGACGG
TACACTACCGCCATCAGTTCCACCGCAAAGCGCGGCTTGCTCAACAGACT
TCACAGAAGATGATAATGAAGCAAAAACATCTGAATTTTCAATATACTAT
GACCAGCAAAGTAATACAATAATGGAAGAACTACCATCCAATACACTAAT
AAGGAAGAAGAAAAGCTGGATGATTTGTTGATGGGTTATTCAGATTATGA
CCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036204-exon-sc0001426-1575043694:9437..9491 | TCONS_00036204-exon-sc0001426-1575043694:9437..9491 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1575043694:9050..9256 | TCONS_00036204-exon-sc0001426-1575043694:9050..9256 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1575043694:8607..8898 | TCONS_00036204-exon-sc0001426-1575043694:8607..8898 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1510915933:9437..9491 | TCONS_00036204-exon-sc0001426-1510915933:9437..9491 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1510915933:9050..9256 | TCONS_00036204-exon-sc0001426-1510915933:9050..9256 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1510915933:8607..8898 | TCONS_00036204-exon-sc0001426-1510915933:8607..8898 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1491911889:9437..9491 | TCONS_00036204-exon-sc0001426-1491911889:9437..9491 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1491911889:9050..9256 | TCONS_00036204-exon-sc0001426-1491911889:9050..9256 | Clytia hemisphaerica | exon |
| TCONS_00036204-exon-sc0001426-1491911889:8607..8898 | TCONS_00036204-exon-sc0001426-1491911889:8607..8898 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001426 | supercontig | sc0001426:8607..9491 - |
Blast
The following BLAST results are available for this feature:
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