TCONS_00036186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036186
Unique NameTCONS_00036186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length99

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036186 ID=TCONS_00036186|Name=TCONS_00036186|organism=Clytia hemisphaerica|type=transcript|length=99bp
ccttgaaattttcagcttgTGCTTTTATGTGGTTTATGAGCATGAGCAAG
TAATTTTCACATATTCTCACTCTATTCTCAACTACTTTATACCTCAAAc
Run BLAST on NCBI

transcript from alignment at sc0001422:39030..39128

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036186 ID=TCONS_00036186|Name=TCONS_00036186|organism=Clytia hemisphaerica|type=transcript|length=99bp|location=Sequence derived from alignment at sc0001422:39030..39128 (Clytia hemisphaerica)
gTTTGAGGTATAAAGTAGTTGAGAATAGAGTGAGAATATGTGAAAATTAC
TTGCTCATGCTCATAAACCACATAAAAGCAcaagctgaaaatttcaagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021283XLOC_021283Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036186-exon-sc0001422-1491911889:39030..39128TCONS_00036186-exon-sc0001422-1491911889:39030..39128Clytia hemisphaericaexon
TCONS_00036186-exon-sc0001422-1510915933:39030..39128TCONS_00036186-exon-sc0001422-1510915933:39030..39128Clytia hemisphaericaexon
TCONS_00036186-exon-sc0001422-1575043694:39030..39128TCONS_00036186-exon-sc0001422-1575043694:39030..39128Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001422supercontigsc0001422:39030..39128 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top