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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036181 ID=TCONS_00036181|Name=TCONS_00036181|organism=Clytia hemisphaerica|type=transcript|length=727bp
GACTGGTCTAATTTAATGTTTAAACACAGCTCAGTAATTTAATAATTTAA
ATACACAATATTAAATTCTTAAAGATACAGTGTAACCtactttctttttc
agaaataaaatgaaaaccgTAATGCAAAGATACAACAGATTCTTCTGCGA
ACGCACCAAAGACGGCAATCAACATCAGCAACAGCAACAAGATTTAAGGC
AAGTCCTCGAACAAAGGGTTCAAGAACAAGTCGATCAATTGCATGAACAA
CATCaaaagtcaattgaaacaatccaAAACAAGCACAGACAGGATATTGA
ACAATTGCTGAGTAGATTTGGGAACGCTGAGGGTAGTGAGAATGACCACA
CGGATGGAGATTTCCTCCTGGAAGAGACACCTGAAAATAACGATGATTAA
GAAACCCCGGATGAACCAGTTGAACTCACACGTGCCGATTTTGATGAGTA
TCGTCTGGACCATCCCGGGCCAATGTCAACCAGCGCCTTCAATAAATGGA
AGAGTTTGGGAGGCAAAGACGCTTCTTGGTTTGTTTGGCGGGTGGGACGA
AGAAATCGGGGTAGGGGTGGAAAGGGTAGAGGTGGTTGGGGCAGGGGTCG
TGGTTTAGGTCGAGGTCGGGGTAGAGGTAGAGGGGGTATTGCTACGGGTA
GAGAGGATGATGTAGTGGGAAGGGGTGAGAGAGGGAGAGGGGGTAGTGTA
GTGGGTGCTAGAGGGGCTAGAGCTGAC Run BLAST on NCBI transcript from alignment at sc0001422:48104..48994- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036181 ID=TCONS_00036181|Name=TCONS_00036181|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at sc0001422:48104..48994- (Clytia hemisphaerica)
GACTGGTCTAATTTAATGTTTAAACACAGCTCAGTAATTTAATAATTTAA
ATACACAATATTAAATTCTTAAAGATACAGTGTAACCTACTTTCTTTTTC
AGAAATAAAATGAAAACCGTAATGCAAAGATACAACAGATTCTTCTGCGA
ACGCACCAAAGACGGCAATCAACATCAGCAACAGCAACAAGATTTAAGGC
AAGTCCTCGAACAAAGGGTTCAAGAACAAGTCGATCAATTGCATGAACAA
CATCAAAAGTCAATTGAAACAATCCAAAACAAGCACAGACAGGATATTGA
ACAATTGCTGAGTAGATTTGGGAACGCTGAGGGTAGTGAGAATGACCACA
CGGATGGAGATTTCCTCCTGGAAGAGACACCTGAAAATAACGATGATTAA
GAAACCCCGGATGAACCAGTTGTGAGTAAAATTTACGATATTAAAGAATC
AATTGAGACCATGGTTTTCTTGCACCGAAACGTTGAAGTGCCAAATGTCA
AAACCATCTATTCTATACCCTTTGAACTTGACCGTGTAACCGGTACTCTA
CTTTATGTTTAAGTAAATTTGATATTCTTTTTAAGGAACTCACACGTGCC
GATTTTGATGAGTATCGTCTGGACCATCCCGGGCCAATGTCAACCAGCGC
CTTCAATAAATGGAAGAGTTTGGGAGGCAAAGACGCTTCTTGGTTTGTTT
GGCGGGTGGGACGAAGAAATCGGGGTAGGGGTGGAAAGGGTAGAGGTGGT
TGGGGCAGGGGTCGTGGTTTAGGTCGAGGTCGGGGTAGAGGTAGAGGGGG
TATTGCTACGGGTAGAGAGGATGATGTAGTGGGAAGGGGTGAGAGAGGGA
GAGGGGGTAGTGTAGTGGGTGCTAGAGGGGCTAGAGCTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036181-exon-sc0001422-1575043694:48574..48994 | TCONS_00036181-exon-sc0001422-1575043694:48574..48994 | Clytia hemisphaerica | exon |
| TCONS_00036181-exon-sc0001422-1575043694:48104..48409 | TCONS_00036181-exon-sc0001422-1575043694:48104..48409 | Clytia hemisphaerica | exon |
| TCONS_00036181-exon-sc0001422-1510915933:48574..48994 | TCONS_00036181-exon-sc0001422-1510915933:48574..48994 | Clytia hemisphaerica | exon |
| TCONS_00036181-exon-sc0001422-1510915933:48104..48409 | TCONS_00036181-exon-sc0001422-1510915933:48104..48409 | Clytia hemisphaerica | exon |
| TCONS_00036181-exon-sc0001422-1491911889:48574..48994 | TCONS_00036181-exon-sc0001422-1491911889:48574..48994 | Clytia hemisphaerica | exon |
| TCONS_00036181-exon-sc0001422-1491911889:48104..48409 | TCONS_00036181-exon-sc0001422-1491911889:48104..48409 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001422 | supercontig | sc0001422:48104..48994 - |
Blast
The following BLAST results are available for this feature:
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