TCONS_00036179 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036179
Unique NameTCONS_00036179
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1874

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036179 ID=TCONS_00036179|Name=TCONS_00036179|organism=Clytia hemisphaerica|type=transcript|length=1874bp
CGTATCAACATAGAGAGGCAAGAACAGACTGTAAGTAAGTAAGGAAAAAG
ACTTCATAAAACAAATTTGACTTGctataaaagttttattttttcttgag
AGAATTTTGTGTAAAATTCGTTTTTGATCTCCAATCTGCTCAACATTATT
GGATACACAAGATATTGATTGAAATGGGAATGATCAAGGTGATTTTGATG
ATTGCAATCGTCACCTTGGTGATCAACGAATCGGATGCTTGTTTCACACA
TGTTGGCCCTGGTGGTTTGAGACAATGTATAAAATTTAACACTTATAGCC
AGTACCAATGGGCTACTTGTTTGACAAATGAAGAAGTTCTTGAAAGATCA
GAAGGGAAACATTGGTGTACGAGATCTCCAACATCTGGTGTAAAATATTG
TTGGTATCAGTGCGAGGTGGAGAAATACGGCAAAAATTCTGGTTCAGTCA
GCAGTGATTGTCGATGTAATATATACCAGCAGCCAGCTGTGAAACAACTT
GCAGATTGGTGTTCTAAAGATAATGACACTGGaGCCAATACCTGAATGAC
CATATCAAGGCTGACAAATTGATTGAATGTGGTGGTATACATATTCATAC
TGTCAACCTACAAATGTGTTGCTTACTTGGTCTCCCGGGATGTCATCAAG
GAACCAAAGCTGTTTCGATGTGTGATCTTCCTTGGAGAGAGTTGTGGAGA
ATAGCTACTGAGCTAGGAGAATCATTTAACGGTTTCAATGAAGGTTTCCA
CGCTTTTAGCACAGTCACTTTCACATCAACGCATTGCAAGAATCCTGAAA
AACATTTCGAATACACTAAAGTGATCGAAGTTGTTCTTCTACCATCAGCA
AATCACAATCGAGGAAAAGATGAAACAGATGATATGATTGGTTATCGAGT
CGGTCAGGAATTGattcaaagtttttatgacAACCCTTTGCGTACACGTG
ATGATCGTGATAGAGATTTGGTTTTCTATCCATTCTTTTCACCCAAAGAA
TCCTCATCGTCAAAAACCGTGGTTAAGATCTTCCTCTTCGATAAGGCCAA
TCTTGAAGCAGACAACCCATTGACACCACATACAGTGCGCTTAACACCCA
TTACACAGAAATTCATTGACGAATTTAAAAATGGAAGTATCTCGATCAAA
ACAAAGACCTTATGGCCAACAAAGGCGAGCATTTGTATTGATTATCAATG
CAATGGAAGGAGCGTCACTGTGAAGAACTCAAATAAAGCGCCAGATTCGT
TTTATGTTGCGTCTGGTGATTTCAGTTTCAAAATCAACTATTTCACtatt
ttgtttatgattttCATGACAAAACTTTTCATCATTTAAATCAGTAAATC
GTTGATGTCATTAAAGCAACAAGTTATAATGGATCTATAATATATTATAG
ACGTAGCACATATAATTTCATAAGGACTTCAATTCAGGACTCCTGTAATA
CGCAGATATGTACTTTGGCGCAGAAACGTaattaaattttgcagattACG
TAATTCCTGTGCACGTATGTAATAaaaaacgactggacatctatcttctA
TTGTGTCTTTGAAGTGAGCTTTGTTGCCGCCTGTATTGCAAAATTGGTAC
AAAAAATCCGACAGTATTCCGTCAcagttttatttctttgaattacttcA
GTAAAGGAtcgatagagcttgaacattattTGTAATTCTGAAAAGAAGAG
aattattctcaaattttttattttctcaataAGTTTGCAAcaaattttat
caacatttttcaacgtTGGAATGCAGtgattattttttgtcattccaATA
ATTTTTgcttatgacttgaaaaaaatagtatgccaaacttgagagcctgt
gtcataagaatgtcataatttgaa
Run BLAST on NCBI

transcript from alignment at sc0001422:4894..22742+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036179 ID=TCONS_00036179|Name=TCONS_00036179|organism=Clytia hemisphaerica|type=transcript|length=17849bp|location=Sequence derived from alignment at sc0001422:4894..22742+ (Clytia hemisphaerica)
CGTATCAACATAGAGAGGCAAGAACAGACTGTAAGTAAGTAAGGAAAAAG
ACTTCATAAAACAAATTTGACTTGctataaaagttttattttttcttgag
AGAATTTTGTGTAAAATTCGTTTTTGATCTCCAATCTGCTCAACATTATT
GGATACACAAGATATTGATTGAAATGGGAATGATCAAGGTAAGTAAATTg
ctattagcgaggttaagcaagaagctatctattacgtacggaatctatta
cgtgagtttttagACTGGATCCGAACCGTTTTAGCCTGATTCCTAAAGCT
TCACGGCANCCATGACAAAGACAATGTCACTAAATCGTTTAAAATCATTT
AAATAAGGTTTGTGGCGGTCAATGAGCGTATCAACATAGAGAGGCAAGAA
CGGACTGTAAGTAAGTAAGGAAAAAGACTTCGTAAAACAAATTTGACTTG
CTAGAGAAAAAAGAGGTTAAGCAAAAAAGGCGATCTAATGTTAATTTTTC
CGTATCTCACTTTCGGCCCCAActtctaaaattttcttcttcgttttttc
ttttccagttttCTTGTTAGTGGCTTGGTCTATAAAATCCCCTTGCTTTC
AATTTTAATCTACTTAGTTTTTTCCCAAGACAAatgtttttcacaaaaat
taaatctagACAAGCATATCGTCAGAGTATTCTACACCCCTgcctctgtg
acccagtgggatccaccccactcgtcaccccagtgaaaaatattcccaaa
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCCCCATTGAAAGATACGAAGAATCCGCACATACCCCActcaaa
attttatgattttgacgTACCCCAGTAGAATTCTCACATCAAAAGGTTTA
CCCCACTAGAATTCCCCCTTCTCTTATAGAATCCACTTTTTGAATTAACG
AAATGCTCAATTTTTTTGCTCGCTTCGATCGCAATCAAAACTGTATAATT
GTCCATATCACTGCGTCGTCAAAAGTAGTAGCAAGTTATGATCTAAACAG
ATGGTCTAGAATATATCCAATATGTATGAAAGTccttatctttaaaaaaa
aggcaAGAGCAAAATGCGTTTCCGTTTTTCAGTCAagcttttctcaaaaa
ataggtCGGTCGTGTGTCGATCATTCAAGTTCGTAAATCAGAAGCGAAAA
TAATGATGACCTTCAGGTAGACTTGATGACTAGagaaaaaatgatgaata
tGCAAGTTGCTGGGTTAANACgcagttgaaaaatatattccCTATCAGTA
GCCTCAGATAGTGTAACAACGACTCCGCACTACATTTTATAATTTAACAT
TTGACTAGCACTGCTAGCTACTCTACTTAGCATACCAGAATAAACTTTCA
GAAAGATTTTCTTCACCCCAGTGataatcaagaaaaaattgGTCACCCCA
CTCAATTTTTCGGGAAATATCTTGCACCCCAgtgaatttcagatttttca
caTCCCACCCCACTGGATGTTTCACAACCACTggggcacagagacagggg
tgttattctattacttttacttttattCAACATTTTAGTAAACAAAAATA
TGTCTATGACTTATNCATATAGTCTCCATTACTTTCAGAGAAATGTCCTT
ACATACTCCGCTTTTACTTTATCCAAAGAACATACAAATATGAGTATATG
AGAAAATCCTTTTAATTTATGCAGTTAATTCTAGTCAGTAGGGCAAAGTC
TCCTGATTGCNTTAATTCCTAGTTTACATAGGTACCAATCAAAAATTACG
GCTTTATCTATAAACAAAAAAGTAATCTGTAAGAGCATAGTGTTCAGATA
TGTTATCCTTATTTAGCTGAATTTCTATATGAATGCTTCACCATTGGCAT
TACCATCGCGCAGAATTGATGTTGCAATTTTTGTCATCTATAAAATGAAG
TCGTTGCACTGTTTTTCGCGCGAGTTCTATTTTCtaccaatcaaattgcg
tcacgcattcgaaagattcgaaaatgttgcaatcaaaacattgaattcat
tTGTGAGTTTGGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNGTATCTCAGAGCATAGGCGTTGAATACCTTTACATCAAAAAATGC
TCGTTGTCCACGAACCCAAAAGCCTCCAGCACTGATGTCAGCTCTCGCGT
TGTcagaaaaaaaagttgtcaaaaactgtaacgtcaatttttaTAAGAGT
AAATAAAGATTTCTTCTGTTATGCTTTTGCAGGTGGAGGCGTAAATTTCT
TTGGGCTTGGCAGAGCAGTCTTTTTCTCGTGTTTGCTGCTTTGTTTTGAC
ATATTATAACTTTGGCTTCTTCGCACTTGATGGTGGCACCAcagaaacac
tgaaaaacatgaaaaagaaatatggttacATGCTGTTCATTGTAATGGTT
ACTTTGGATGTATTTGGACTTTCAGAGCATATATAAAACaagataaaaaa
gagaagaaaaacaaaagaaccagaaagacacttctgtttgttttgttttg
ataaaaaagttagCAAAGATTATTTTATTACAGTTACACATTGACCTTCT
TTTGTGCAATAAATCCTTTCACTTTGTTTGTATGCATCATAGTTTCCATA
GATgagattcaaaaaatttcttctgtTTTTAGTTTTCTGAGCTCAAACTt
gtcagaaatcaaaaaaatttaccaaagtttcatttctgtttacatttttt
tcgggTGATTTTTTATCCTAAACGATTCAGCCCAATCTCCATAAGATAAA
TTTCCCGTGGatcatgcttatatcctaatcgATATCTATTACGTGAGATT
GGAGAATTTCGCGCAATAGATCCACTCCCCAAAATACGACGTACAGGTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNga
tagcttcttgcttaacctcgctattgtaAATTCTATATTCTGTCCCTATA
AGGCCCGATGGGGGGGGGTACTGGGGCAAAAAGGGTTACAGGGGATGTGC
CGCtagtcagggtacctttttttaacctccacgagtcccggGTAGGGTCG
CAATACACCAAAGTAGAAAAACCAGttcctcgtagggtgccttttttgga
aaatttgggaaaaaagtagaaaattttagaaaattttggaattttagctc
caggtcacttttttcgcaaatttcggcaaaatatttaaaaaaacgactcc
aacgtagggtccatttttcgaacctcagcggagcaccccttCGGTCGGCA
AGGGCAGTACCCCCAACTGGGCTCTGAGAGACCAGATTGTCTGAAAATGC
TGTTGACTTGGCGAGACTTCACAACCCCTTTCATCATGACAAGTCGGCGA
TGCAAGGAGTTATCACGTATTGATACTATAGGCAATTATAGATTATAANT
GGATGCAAGGAGGAATGACGTATTGATATTATAGGCAATTATAGATTATA
AACCAATGGTTTAATGGACCTCATTGCGTAACACGTTTCTAATTgttaaa
tttttggattttgtcGAATTCAAATCTTTTGTGTGAAAGCTATAATATAA
ATCTTTATTTCATACTAGCTTAGTAAAAGTGGCGAAAAGGTTCGGTGGCC
TTGGTTAAGCTTCTGACCTAACAAACTTTTAGTGACCTGGTTCAAATATC
CTACCTAAAGAACGTTCAAAGTGCATACATCTGAGCCAACTGGCCGTTTA
TCTCTAGAAATTAATCAAAAGACTGTAAAAGACTTAGATCAAGAGGGGGT
TTACTTGGGCAAAAAAGGGAAGGGGATGTGCTACTGCTCAGGGTACCTTC
TTCACCTCCGTGAGTCCCATGCAGGGGTTGCAAAGCcagcaaaatagaaa
aaatcagtccctcgtagcgtaccttttttggggaatttaggaaaaaaatg
taaaaattttgagaaaattttggaatctaAGTACCCCTCCTTCCGCCAGG
GACCTAGACTACTGGGATATCtacgcaaaaatattgaccctaGCAGACAT
AACATATCATCTTGCTTTTTCTTTAGGTGATTTTGATGATTGCAATCGTC
ACCTTGGTGATCAACGAATCGGATGCTTGTTTCACACATGTTGGCCCTGG
TGGTTTGAGACAATGTATAAAATTTAACACTTATAGCCAGTACCAATGGG
CTACTTGTTTGACAAATGAAGAAGTTCTTGAAAGATCAGAAGGTGACCTG
TACTTNAAATTTAACACTTATAGCCAGTACCAATGGGCTACTTGTTTGAC
AAATGAAGAAGTTCTTGAACGATCAAAAGGTGACCTGTACTTTTTATATT
TAGAGCTAGAGGTCATACATTGGTAGGAAAGTCACGAGCATCATGACTCA
CTGATTCGTGACTACCTTATcagccccttttacgccggccctagaTTAGC
ACTAGACCTTATAACTCCAAAGCtcattttgtttaatttttaacctAGTC
CTCATATAATCCCGATCCCTTGTTAACATTTCTTGagcacatttttgaaa
tcttctaattttagaaatgttagcaaatgttacacaaaaatgttaCCGTC
TAACACGACCttaacatttgattttttttattaaaaaagagagaaaaatc
ggCGAAAAAACACGTGTGCACTTGAAGTATCattttaaattccctttaaa
tgGCGGCATCCTTTGATTCAAAATGTTAACCATGAGagcaaatcattttt
ttttgatttgctaTCTGCGCGTAACATTCGTTAACATTTGAATGTTTCTG
AATGTTAATCGATGTTACACGGTAACATTTTGTACAacatttgctatttt
tagaaaatgttacacaaaaatgttaCCGAATGTTATCGTCTAACAAGACc
ttaagggttgtaaaaaatatacaatgaagattcgtgcttaacatcagatt
ttgatcgcttcatattaatattccagatttaacgaaaattggtcattaaa
ccttttgttctccaagagagagggtgtttttccactgacAGATTAGAGAA
GGATAATCCGAAGTCGTTAACTCGACAACAAAAGAATCAATTAAATAAAT
CCCGATTATGTTGGAAACACAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNAAatataaattgaaatattttaaacaagta
gaaaaaatcttcatttttttcttcttcgtttttcattttcattttcgaat
ttttcgaaaatttttaaaattttataatctTCCACTTAGAATTATCTTTT
CAGCGAGGTATtacttttgattatatcttttttCCTTCAAGAGGAATTGA
CCAAAATGTGCGGACTGCCAGAACTTTTGGAATAAACTTTAGTTctttaa
attatgaaaaagcaAATTAGTTTTTATCATatgtttttatttatctttCA
TAACTTTAGCTAATTCtaacaaaaatttcatctctttCTCTTTTTGTGTT
TCTTCGAATTTCTGTTGAAGCTCCACCATTTTTGTAAAGAAGGTCTCAGT
TCTTTTATCAGACTCCTCAACTAGAGTTTTTAGTGAGGTTACAGTCTCAC
TAGATTTACGTTTTGTCCCACTacttctgaaaatattttgctggATTGCT
CCCTTGAAGGTGGGATCACTTGATTTGCTTGTGAAGATGGAGCggctgtt
gttgctgttgttgtaaTTGTTTGATTTGGTCCAGTGGAACTTATGGCCTG
GTTGGCTCTAGTTGTGGTTGTGTGAGTTGTACCTTCGCTGGCTCTCGTTG
TagttgttgttttattttgtccagttgCGGTCTGGGTAGAGTTGGTTTGA
GATATAATCGTTACATGATTAGTTTGGGATCTGCCAGTGGCTAGAATGGG
TCCAGTTGGGTTGCTTGGTCCATTATTTGTTGTTGTAGGTGTAGTCTGAA
GTGTTGATGGTCCGATGGATGTAGATCTAGATGATTGAAGACCTGAAACG
AATAAAAATGACaccttttgtaaatattttttgtttttcaagtttaaaaa
aagacaATACTCTCTTAACAAATGACTTTCCTTCTCAGTACATCGTAAAG
TTAACATTTCTACATTTTTGTACCTTTTcacattgttttcaaaaagaaat
ttataatcTTCACATTGACGTCTacctattttcaaaatgtttgtcTTTCC
AACAGTATTTGACAGCACTAGAGCTCTGGGATCCTCTTCCATTTCACAGA
TAcactgtttattttttataagaattctttttataagaatcatgaggctc
aaaatcttaagaattttaagaatTAGTTAAGAATCACTCTCAGCCTCAAA
TAATTTTATAATCAGCGAGAATCTATTCTTCAAAGGTACCTCAGTGTCAA
TCCACTAACATGAATTTCCCAATTTTTACATAATCCTTTATAACGATAAA
ATACCTTGTGTAAGTAAAACCGATGTagatcttgaaaaaaaattcaaaaa
gNTTTTATAATCAGCGAGAATCTATTCTTCAAAGGTACCTCAGTGTCAAT
CCACTAACATGAATTTCCCAATTTTTACATAATCCTTTATAACGATAAAA
TACCTTGTGTAAGTAAAATCGATGTagatcttgaaaaaaaattcaaaaag
tcgaccttgaaaatttaagaatcattTAAGAATATTCATAGGCTCATCTC
AATTtatgtaattcttataaaaaataaactgtGTATAGTCCGTAGAGGTT
GGGAACTGAAGGTACCCACGGGATAACTTTTNcttttcaaaaactgctga
tgtcatcaaaaatgacgtcattgttttatgaaaagatttactcattttct
gcatggattttaaacctcGATTTTATTCGTATGTTAAAAACCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgtactttttcattggtaagCGATAATtatgaaactttgtga
tgacgtcatcatctttatgatgacgtcatcaacccaaatttttttatatg
GACTCCTTTTATAGTAGAGAACATTTGTGCCAAACTTCaagtccatacct
tttctagatcaaaagttatgcaaggctggtggcccggggggggcactcaa
ggtaaattacttaccagacgttcggcccttaagggtagatttttcatagt
tcagctagtgcactgtaagggtaggaaattacaaaacttcactgaactgc
actgtaagggtagggaATTGTGATAAAGAgtcaattttttggtaaaattt
gcacaaaattgGTCCATTTTGGACGAAAAATTctacattttcttggaaaa
ttgcaaaaattttcgcccttacgggcgtgaaattttgaacaagtgcactg
taagggtatgatttttcatggaaattcactgcactgtaagggtccgattt
tagaagccaaattttgggccgaacgtatggtcgttttcagatcgagtgcc
cccccggggctggtggaaaacacccccccttgagaatacaaaatccaaaa
aagcctgataataatagggttaaggggTTTCCGGTCAAATCTAAGTTTAT
AGATCGTTTCGTCGAATTTACAATTTCGTTACCAAAataaatcctcgcca
aatttagaaatttcattaTCTCGCCGAAATAAATTCCGCATGCGTAAGCC
GTCGGCagaaaagttgtgatttttttctgaagtgCAAAACCTCTATGGTA
AAGAAGGGGTTTAGGTAGAAAACTTATAAGATGGTAACTTCTCACCTTTT
TGATTAATGCCAACTTGGAAAACATAAGGCAGTCTGTGCGGATCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTagacctctcttggctt
aatgaccaattaagcgaaaaaggcagcataaataaattggttgccataaa
agtagcagaatgtgcagagggattcttttgtaaaagtttggtcatatggg
aaaaatgttttctttcccgataaagttgaagagcaaactttcatctgtat
tgatttgatacaaaagacgaggaatcttatcacagaaaatgttcattaga
aggctgtaattctaaatcccttgatatgcgagttgatgatttttaataaa
gttttcttcaaattcaaagggttgtaaacgctttgacaactgttttggga
gtcagtaatgctttcccatcaattttctttgtttcagctaatcgattttc
gccagacagtctcagtgaaaaaccacccaTTGTTGAACTAATTCCATACA
GATAGATCAAAAATATATAGTGAAAAATCTGGCattgaaaaaaaactaga
aaCAATGAGCAATGACTATACTACAAAAGAAATACAAACGTCTAGGGATT
CGTATAAAAGATAATTGCTTTAAGAATATAAAACGAGATAATTGCTATAT
AATTGATAGGTTAATGATCATAGAGACACAAAGGACTGAGAGTTCCGTGG
GGAAATACAAAATGTAGCACTTATTTTACAGGGAAACATTGGTGTACGAG
ATCTCCAACATCTGGTGTAAAATATTGTTGGTATCAGTGCGAGGTGGAGA
AATACGGCAAAAATTCTGGTTCAGTCAGCAGTGATTGTCGATGTAATATA
TACCAGCAGCCAGCTGTGAAACAACTTGCAGATTGGTGTTCTAAAGATAA
TGACACTGGGTAAATTTAATGATACTTAACTACACAATAAATATACCGTT
TCacaaattacgtcacgaatatcacttgcctcgtatgcaaacaattacca
tggtgattatgtcccttaaGACATTAAAGGATTTTTTACTGAATATAAGG
TAGTTGTAATAAAacccgctgggagttaatcaccatggcaataattttaa
aacgaggaaagtgatgttcgtgacgtaatttatgaaaagttctATTGAAG
ACTTGAAGTCGAGATTAGAATACCCTCTTCTCGAGATGAATAAATTTATT
GCTGTCCTCGTTTTCatacagatttcattgctataaaattacatattcaa
atcaatttaaattcccaaaggAAGTATTAtctctaaaacaaaagaacatg
aaattcaaaatgcctaatgaggtgtaaacaacacaattatcattgNAAGA
ACATGAAATTCAAAATGCCTAATGAGGTGTAAACACCACAATTATCATTg
cgaatatgtaattttatagcaatgaaatctgcttgaaaacgaggacaaca
ataaagttatgcatctcgagaagagtgtattgtttgatactcaaagtttc
acgcAACCTTTCGTTAcgatcttcagtcaaaaattctatATTTAAAATTT
GTGTCaagtttataaaaataaactGAAAAGTCTTCGTCAAGAATGATACC
TTactataattttttgttttgaaatttcggCTGTCCCTTATTTTGTTCAC
CATTACTATCAGACTTGAATTGTTTGAATGATTTTTGATGATTGGGTTCa
acacagtggagtctcttAGCTCAAACACATACAAGGAACACAAACTTATA
TTTTCCGGAATTTACCGGGTATTTTTCCTATGTTTGCTTCCTATATAACG
ATTAAACTATTAATGATTAGGAAATCGGCTGAAAGTTTAATGTGGGGAAA
ATTTGAAGTGATCGACTCGGGAGTTTCCTCTTCAGAAAAcgccattttca
ttttctcattcAGGACATAATTCCTGAAGGTGtgttataattattttatt
ctGAATCGGACAATTAAAATCAATGTCTGAGAAGTTTTGAAAAGTCATAC
TGTAGACTAGGGACGAAAAATCATTCTAAGAAACCTCTAGGACTTGGTCC
TGTAATTGGACTCATCTATGCGCAGCAGAGTCTATttaaccatagtataa
gaaagtcacggctggaatgataacatctgaatttctgttgttctatctct
gtcgtatttgatgactatttgttgatcaagaaatcagtaatgtagcatct
ttaatggtaaattttattggtttgtcatTAATACTCACGTCTCAGTGCGT
TTTGGACATTAATTATATGCCCTCAATAATACATTTGAACTTTataatca
ttgtaaaggaaagatcaacaataagaaatttaaacaagcacaaaatggct
ggactgaaagaactcaaaaattaataaagtgcctcgaatgccttctcaat
atttcagtgaaattattgtagaaatcaatgaaaaagtacatcaagataat
actgtcagaatttcaagccagcaccttcaaatttttcattcaaactgaca
ggaaagttgtcatcttgaatatagttcttataatctcaattttggcgaaa
aactattgtttccacaaaatacccctaaaatattccaaaattagttcaag
tgctCTATTgtgtacagattcaaagatatctagcaaaagaaaacttttta
agaaGCAAAATaagagcaaaatttcaaaaactatctaccaataataaaaa
tgagcatcttgatgttcttataaagctcagAGACAGAGTTGggacagcaa
ttaactgaaaagacaatgcggtacatattccagccgcggctttttATACT
ATGCTTTAACTATAtaactctataactcgaatgtctcctaaactcgaatg
tctcctaaactcgaatgtctcctaaaCTCGAATAAGTTTTCCTATCCCCG
TGCgcgtttgagttatggagactccacttagaattttttaattcgCTTGG
ATTTAAAATCAAGAATGATCCAGAAATTAGCTGAAAATAGCCCTGAAAAT
ACGcccatttttatcaaaaatagatATTCACAACGAATTGCAAAAGGATT
AAAAGCGAAGAAGGGATTTTTTTTACGATGGATTGAGTGTTGTCGTATTA
TTCGTCTTTATTGCTGCTGCACCTCTCTACAGCCACTAACAGCTTTGATA
TTTCTCTGTGCTCTAATCCTTATTGACTATAATATAAACCCCTGTATGAC
TTCAAGTTAGAACAATTTCCCACAATGGggaataaaatttctattaaaat
CCCGATTGGGATGATGGAGATGGTTTtagagtttgttttttttttaatgg
ggATGAGGTCAAAGTTGAagaaaaagttgagaaaaaacCTTTAATTCCAT
GCTCAGAAAAGAGTTTCTGAGCCTTGAATTAAAGGTTTTTTCTCAACGGT
GACGAAATTTCCACAAAACTTTCCAGTTGGACTTGGGTTCTAATGTCTTT
GTAAAACGCTGGTTACATGACCTTGAAATATGATCTTATAGGTGCCATTG
GTATGACCAGTGCATTGGGAAATATCTCAACTGTGAAAATACAGCAACCG
AAAGAGACATTGCATTCAACAAAGCTCTTTGCAAGCTTACAGATAACCAT
TTTACAAGGAAACAAGAATTATCGTCTTCAGCTAAAGACTGGTTGAATAa
cacaaaaaaatgtttgaaggtaCAAAATTAATCGGGCATTTCCAGAacaa
accgtataccccctgttgaggagatCCACccctctgtggctggaaatgct
gcaaCCCATTgaaattccaggcaatttcaggtttaaacccctctggaatt
ctgaattttaatataatttaaaaagctacccccatGAAATTCcaattatt
tttgacagatttttgtatctccctatgtaATTCCGCttcatatcaaacct
tacccccttgaaACGGAAATGAACCTCCTCAACTGCGGGGatacgttttt
tttctggaaaagcccaatctatGTTAACGAGTGAAAAAATCAAGGAATAA
AGAACTAACTACAATATTGCTGCTACACGGTGTTTCATGGTGGCGCAATC
TGCAGGCAATGCAGTGttgtagattttatttcaatacaGTTTCTAGAGAC
GTAGAAAAGAAGTAGAAGAGttctatgaaataggctaatacTAAAACGTT
TCCTATTCCTCAGCTTTTTGGCAAtagcattttaaaatttcatttctaga
GCCAATACCTGAATGACCATATCAAGGCTGACAAATTGATTGAATGTGGT
GGTATACATATTCATACTGTCAACCTACAAATGTGTTGCTTACTTGGTCT
CCCGGGATGTCATCAAGGAACCAAAGCTGTTTCGATGTGTGATCTTCCTT
GGAGAGAGTTGTGGAGAATAGCTACTGAGCTAGGAGAATCATTTAACGGT
TTCAATGAAGGTTTCCACGCTTTTAGCACAGTCACTTTCACATCAACGCA
TTGCAAGAATCCTGAAAAACATTTCGAATACACTAAAGTGATCGAAGTTG
TTCTTCTACCATCAGCAAATCACAATCGAGGAAAAGATGAAACAGATGAT
ATGATTGGTTATCGAGTCGGTCAGGAATTGattcaaagtttttatgacAA
CCCTTTGCGTACACGTGATGATCGTGATAGAGATTTGGTTTTCTATCCAT
TCTTTTCACCCAAAGAATCCTCATCGTCAAAAACCGTGGTTAAGATCTTC
CTCTTCGATAAGGTAACACTACCGAGTTTTATGTAACCCAATTTTCTTAA
GAGAGCATCGGAGTTTTTAAAACCAGACACAGAAATATAGAGCTTTCGAT
AAGGGATCAACTTTTCTTTTAGCCTTCTAGAATTAGCTCTGATCTTAGTc
tgtggctgaaattttgcttaTCGGTTCCTTATGTGTCCTAGTACCACCAG
ACAATACCTACAATCGATTCAAAATAGTTAAAAGTTACGAGGTCCACTTT
GAGTACAAACCCGCAAACATCGCAactcttttatttgaaagatcATGAAA
AATAGATAACAAAAATTGGTTCGTTCCTAAGAATTTTGCCGATCAACCTC
CataaaatggtccaaaaaatccatttttattGATGTCATCGGCTACAGTG
TGACATTTACACTCTATCTCCCTTGATTGCACCACTTACCCTTGACCATT
CTCTTAATCTATGTGCATCCACTTACACTTGATTCTACTCTTAATAACTA
AGCATATCAAACTGAGAGGCATCATATACCACATACGAAGTCTTTCATAC
AACCCAGCCGGGAATTGAACGCACGACCTTGCCCAATGTAGCCGGATGCT
TTACCACTGCACTTCGGTCACTAATTctattttcaaggggaattggaatG
TCATCGAATTATTGAGCGTATCAAATAGTAAAACGTCGTTAGAGAGTGTC
TTAAATGTATTTGGAAGTATTTGAAGCTATAATCGTTCATAAAAAAGATT
CATTAAAATTCATATTTCAGGCCAATCTTGAAGCAGACAACCCATTGACA
CCACATACAGTGCGCTTAACACCCATTACACAGAAATTCATTGACGAATT
TAAAAATGGAAGTATCTCGATCAAAACAAAGACCTTATGGCCAACAAAGG
CGAGCATTTGTATTGATTATCAATGCAATGGAAGGAGCGTCACTGTGAAG
AACTCAAATAAAGCGCCAGATTCGTTTTATGTTGCGTCTGGTGATTTCAG
TTTCAAAATCAACTATTTCACtattttgtttatgattttCATGACAAAAC
TTTTCATCATTTAAATCAGTAAATCGTTGATGTCATTAAAGCAACAAGTT
ATAATGGATCTATAATATATTATAGACGTAGCACATATAATTTCATAAGG
ACTTCAATTCAGGACTCCTGTAATACGCAGATATGTACTTTGGCGCAGAA
ACGTaattaaattttgcagattACGTAATTCCTGTGCACGTATGTAATAa
aaaacgactggacatctatcttctATTGTGTCTTTGAAGTGAGCTTTGTT
GCCGCCTGTATTGCAAAATTGGTACAAAAAATCCGACAGTATTCCGTCAc
agttttatttctttgaattacttcAGTAAAGGAtcgatagagcttgaaca
ttattTGTAATTCTGAAAAGAAGAGaattattctcaaattttttattttc
tcaataAGTTTGCAAcaaattttatcaacatttttcaacgtTGGAATGCA
GtgattattttttgtcattccaATAATTTTTgcttatgacttgaaaaaaa
tagtatgccaaacttgagagcctgtgtcataagaatgtcataatttgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021277XLOC_021277Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036179-exon-sc0001422-1491911889:4894..5081TCONS_00036179-exon-sc0001422-1491911889:4894..5081Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1510915933:4894..5081TCONS_00036179-exon-sc0001422-1510915933:4894..5081Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1575043694:4894..5081TCONS_00036179-exon-sc0001422-1575043694:4894..5081Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1491911889:10370..10535TCONS_00036179-exon-sc0001422-1491911889:10370..10535Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1510915933:10370..10535TCONS_00036179-exon-sc0001422-1510915933:10370..10535Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1575043694:10370..10535TCONS_00036179-exon-sc0001422-1575043694:10370..10535Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1491911889:17175..17352TCONS_00036179-exon-sc0001422-1491911889:17175..17352Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1510915933:17175..17352TCONS_00036179-exon-sc0001422-1510915933:17175..17352Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1575043694:17175..17352TCONS_00036179-exon-sc0001422-1575043694:17175..17352Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1491911889:20643..21155TCONS_00036179-exon-sc0001422-1491911889:20643..21155Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1510915933:20643..21155TCONS_00036179-exon-sc0001422-1510915933:20643..21155Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1575043694:20643..21155TCONS_00036179-exon-sc0001422-1575043694:20643..21155Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1491911889:21914..22742TCONS_00036179-exon-sc0001422-1491911889:21914..22742Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1510915933:21914..22742TCONS_00036179-exon-sc0001422-1510915933:21914..22742Clytia hemisphaericaexon
TCONS_00036179-exon-sc0001422-1575043694:21914..22742TCONS_00036179-exon-sc0001422-1575043694:21914..22742Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001422supercontigsc0001422:4894..22742 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.0821842	0.128233	0.0586671	0	0.0678638	0.119642	0	0	0	0	0	0.228654	0	0.00305643	0.564822	0	0.113274	0.373033	0	0	9.71326e-06	0.487059	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036179 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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