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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036160 ID=TCONS_00036160|Name=TCONS_00036160|organism=Clytia hemisphaerica|type=transcript|length=281bp
TATCGAAGACGAAATAAAACGTGTTATTGTAGGCGCAGGCTTTAAATCAA
GAGTCACTTACATCGGTCCGCGTGGAGAAAACAGAAAAGCGACTGACATT
TCTTTGTCCAGGCTCAAAACTACGATGAAGGATTACAACAATGCGTTTGG
TAACGGTTTGGCAGAAGAATTTGACCAACCAGTTTCTGAAATAGTCACGT
TTAGGAGCCAGTACTATGAAGACATAGGGGCACAAGCGTTGCGCACTGTA
AATGTCAACTTTGTAATTATATGTGGTGCTC Run BLAST on NCBI transcript from alignment at sc0001420:19480..20622- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036160 ID=TCONS_00036160|Name=TCONS_00036160|organism=Clytia hemisphaerica|type=transcript|length=1143bp|location=Sequence derived from alignment at sc0001420:19480..20622- (Clytia hemisphaerica)
TATCGAAGACGAAATAAAACGTGTTATTGTAGGCGCAGGCTTTAAATCAA
GAGTCACTTACATCGGTCCGCGTGGAGAAAACAGAAAAGCGACTGACATT
TCTTTGTCCAGGCTCAAAACTACGATGAAGGTATACTTTAAAATTTGCTT
TCCTTATTTATTTCTGATCGATTTTCATGTCTGAACTTTTTGAGAACACT
AGCTAAGCTTTATTCAGGATTTTCTATTTAGAAATAAACGTAAGCAGCTG
TCATTTTGTCACTTTGAAAGTCTTTTTTTGTAAAATTTATGCAATTGAAT
ATGCGTAAGAGCAGCCTGAAACGGCTGTAGGATCGTCAATTTGGAAACTA
CTTCATTTACTTGTAGCCCGTGGTAGCCTATAATCATACTTGACACAGCC
TCAAACGGCTGTCATATCATGACTTTGAATATTTTCAACTTTTTCTGGAA
GCCTATTGTAGCCCAAGTATAGCCCTGACGCAGCCCAAGGTTTTTAGTCT
GACTTTGCTTGTATAGCCCTGTAGCCCTGGATATTGGACATGTGAATCAT
ATTTCATCATGACTTTGAACATTTTAAACTACAGGGCTTCTCAAACCTTT
TCAAGGTTAAAATCCAAGGGCTACATTAGGGCTACGTTCGGGCTCCCAGG
AGCTATTACCGATTCTTACTTTACATTTTCTATGTGATGACTTTTCGGCG
TTTTCTGATAGTCTTAACTTATGCTGAGATGTCAAAAACCGAGGGCTACA
GGGCTACTCAAACCTTTTCAAGCTAAAATCCAAGGGCTACGTTAGGGCTA
CCAAAGGCTATCATAATAGTGACTTTAAATTTTCTATGTGATGACTTTTC
GGCCGTTTTCTGGCAGTCTCAACTTATGCTGACATGTCAAAAACCTAGGG
CTACAGGGCTTCTCAAGACTTTTCAAGCTAATATCCAAGGGCTGTTGTTC
CTTGTCGTGATAGCATTGCAAGTTCTATTTTTGCACTTTTAGGATTACAA
CAATGCGTTTGGTAACGGTTTGGCAGAAGAATTTGACCAACCAGTTTCTG
AAATAGTCACGTTTAGGAGCCAGTACTATGAAGACATAGGGGCACAAGCG
TTGCGCACTGTAAATGTCAACTTTGTAATTATATGTGGTGCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036160-exon-sc0001420-1575043694:20493..20622 | TCONS_00036160-exon-sc0001420-1575043694:20493..20622 | Clytia hemisphaerica | exon |
| TCONS_00036160-exon-sc0001420-1575043694:19480..19630 | TCONS_00036160-exon-sc0001420-1575043694:19480..19630 | Clytia hemisphaerica | exon |
| TCONS_00036160-exon-sc0001420-1510915933:20493..20622 | TCONS_00036160-exon-sc0001420-1510915933:20493..20622 | Clytia hemisphaerica | exon |
| TCONS_00036160-exon-sc0001420-1510915933:19480..19630 | TCONS_00036160-exon-sc0001420-1510915933:19480..19630 | Clytia hemisphaerica | exon |
| TCONS_00036160-exon-sc0001420-1491911889:20493..20622 | TCONS_00036160-exon-sc0001420-1491911889:20493..20622 | Clytia hemisphaerica | exon |
| TCONS_00036160-exon-sc0001420-1491911889:19480..19630 | TCONS_00036160-exon-sc0001420-1491911889:19480..19630 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001420 | supercontig | sc0001420:19480..20622 - |
Blast
The following BLAST results are available for this feature:
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