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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036158 ID=TCONS_00036158|Name=TCONS_00036158|organism=Clytia hemisphaerica|type=transcript|length=791bp
AAAACATCATCTGCTTTTGTGGGATGAAGTATCCAACCCTTGTTGTATTG
CTTAACCTCTTTGTCAAGCAAGTCTGATCGTACACTACAACTTTTTTGCG
ATTGTTTGACCAACATAAAGTCTTCGTAGATAAAAGGAATATCCTCAGTC
ATTCGATCTGAAAGAAATTCATACCATTCTTGGTAAGACTTGAAAAAATT
GGTAACTGCTTTCCCCTCTTGTAAAAATTTGGTTATTCCTTCCATGATTT
TTGGTTCTCTGTAGCTTGGAGATTGAAGAAAGGTCTTTGATGCAAAAGCG
ATCATGGAATAAAAAGTCTCCCCATTCCGTATTTCTCTACGTTGACATTC
TTCTGGTGTTTTTGATGTCCAATATGAATACCCTTCTTTCTCGCGTTGTG
TAGTTATTACGATATCATTCAAATGATAAGGGTGCAGGATCCATACGGAT
TTCGTTTTTTCAAGCCAATCACCTCCCTTTTTCTTGAATTCTTTTGTTCT
GTTTGTGTCATAATACAAACTGATTTCATCCGATGCATAACCCTTCTGCG
AATATTTGACAAGTATGATATCTTTGTAGATAAGAGGGATGTCATCAGTC
ATTCTATCTGAAAGATCTTCATACCAATCTTGGTAAGACTTGAAAAAATT
GGTAACTGCTTTCCTCTCTTGTAAAAATTTAGTTACTCCTTCCATGATTT
TTGGTTCTTCGTTTGATGCAAAAGCGATCATGGAATAAAAAGTCTCCCCA
TTCCGATTTTCTTCTCGTTGGCATCCTTCTGGTGTTTTTNN Run BLAST on NCBI protein sequence of TCONS_00036158-protein >TCONS_00036158-protein ID=TCONS_00036158-protein|Name=TCONS_00036158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
XKTPEGCQREENRNGETFYSMIAFASNEEPKIMEGVTKFLQERKAVTNFF
KSYQDWYEDLSDRMTDDIPLIYKDIILVKYSQKGYASDEISLYYDTNRTK
EFKKKGGDWLEKTKSVWILHPYHLNDIVITTQREKEGYSYWTSKTPEECQ
RREIRNGETFYSMIAFASKTFLQSPSYREPKIMEGITKFLQEGKAVTNFF
KSYQEWYEFLSDRMTEDIPFIYEDFMLVKQSQKSCSVRSDLLDKEVKQYN
KGWILHPTKADDV Run BLAST on NCBI transcript from alignment at sc0001418:61527..62317 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036158 ID=TCONS_00036158|Name=TCONS_00036158|organism=Clytia hemisphaerica|type=transcript|length=791bp|location=Sequence derived from alignment at sc0001418:61527..62317 (Clytia hemisphaerica)
NNAAAAACACCAGAAGGATGCCAACGAGAAGAAAATCGGAATGGGGAGAC
TTTTTATTCCATGATCGCTTTTGCATCAAACGAAGAACCAAAAATCATGG
AAGGAGTAACTAAATTTTTACAAGAGAGGAAAGCAGTTACCAATTTTTTC
AAGTCTTACCAAGATTGGTATGAAGATCTTTCAGATAGAATGACTGATGA
CATCCCTCTTATCTACAAAGATATCATACTTGTCAAATATTCGCAGAAGG
GTTATGCATCGGATGAAATCAGTTTGTATTATGACACAAACAGAACAAAA
GAATTCAAGAAAAAGGGAGGTGATTGGCTTGAAAAAACGAAATCCGTATG
GATCCTGCACCCTTATCATTTGAATGATATCGTAATAACTACACAACGCG
AGAAAGAAGGGTATTCATATTGGACATCAAAAACACCAGAAGAATGTCAA
CGTAGAGAAATACGGAATGGGGAGACTTTTTATTCCATGATCGCTTTTGC
ATCAAAGACCTTTCTTCAATCTCCAAGCTACAGAGAACCAAAAATCATGG
AAGGAATAACCAAATTTTTACAAGAGGGGAAAGCAGTTACCAATTTTTTC
AAGTCTTACCAAGAATGGTATGAATTTCTTTCAGATCGAATGACTGAGGA
TATTCCTTTTATCTACGAAGACTTTATGTTGGTCAAACAATCGCAAAAAA
GTTGTAGTGTACGATCAGACTTGCTTGACAAAGAGGTTAAGCAATACAAC
AAGGGTTGGATACTTCATCCCACAAAAGCAGATGATGTTTT Coding sequence (CDS) from alignment at sc0001418:61527..62317 >TCONS_00036158 ID=TCONS_00036158|Name=TCONS_00036158|organism=Clytia hemisphaerica|type=CDS|length=789bp|location=Sequence derived from alignment at sc0001418:61527..62317 (Clytia hemisphaerica)
NNAAAAACACCAGAAGGATGCCAACGAGAAGAAAATCGGAATGGGGAGAC
TTTTTATTCCATGATCGCTTTTGCATCAAACGAAGAACCAAAAATCATGG
AAGGAGTAACTAAATTTTTACAAGAGAGGAAAGCAGTTACCAATTTTTTC
AAGTCTTACCAAGATTGGTATGAAGATCTTTCAGATAGAATGACTGATGA
CATCCCTCTTATCTACAAAGATATCATACTTGTCAAATATTCGCAGAAGG
GTTATGCATCGGATGAAATCAGTTTGTATTATGACACAAACAGAACAAAA
GAATTCAAGAAAAAGGGAGGTGATTGGCTTGAAAAAACGAAATCCGTATG
GATCCTGCACCCTTATCATTTGAATGATATCGTAATAACTACACAACGCG
AGAAAGAAGGGTATTCATATTGGACATCAAAAACACCAGAAGAATGTCAA
CGTAGAGAAATACGGAATGGGGAGACTTTTTATTCCATGATCGCTTTTGC
ATCAAAGACCTTTCTTCAATCTCCAAGCTACAGAGAACCAAAAATCATGG
AAGGAATAACCAAATTTTTACAAGAGGGGAAAGCAGTTACCAATTTTTTC
AAGTCTTACCAAGAATGGTATGAATTTCTTTCAGATCGAATGACTGAGGA
TATTCCTTTTATCTACGAAGACTTTATGTTGGTCAAACAATCGCAAAAAA
GTTGTAGTGTACGATCAGACTTGCTTGACAAAGAGGTTAAGCAATACAAC
AAGGGTTGGATACTTCATCCCACAAAAGCAGATGATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036158-exon-sc0001418-1491911889:61527..62317 | TCONS_00036158-exon-sc0001418-1491911889:61527..62317 | Clytia hemisphaerica | exon |
| TCONS_00036158-exon-sc0001418-1510915933:61527..62317 | TCONS_00036158-exon-sc0001418-1510915933:61527..62317 | Clytia hemisphaerica | exon |
| TCONS_00036158-exon-sc0001418-1575043694:61527..62317 | TCONS_00036158-exon-sc0001418-1575043694:61527..62317 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001418 | supercontig | sc0001418:61527..62317 . |
Blast
The following BLAST results are available for this feature:
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