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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036154 ID=TCONS_00036154|Name=TCONS_00036154|organism=Clytia hemisphaerica|type=transcript|length=1124bp
CGTTGCTTACAATAAAATAGTTATCTTAAGACACGTGACTCCATCAATTT
TTATGAGTGGACAATCGCCATAGTTCATATCGTCACACTTTAGTTTCGAA
TCTTCATACCACCAAAATTTCGTCTTCTTTGGACAACCACCGAAATGGAG
ATTCACACCCAACGGTAGAATATCTGTTCGACCTGAAAGGATAGTGGTGA
ATTTGAGAGTTTTTGAATTGTCTGAGAGTTGAAATGAAGCTCTTACTCTT
TCTTGAACACCTTGGTTTCCTCTTTTAAATTCAAGTATCATATCTTTGTG
TGTGAATGGGTTCGCAATCATATCCATCTGATCAAGCCCGATCCAAAAAT
GGGAACTAAAGACATTATCTGTTCTTTCATTCTCCGAAAGGATGTTCGGT
TTCGCAAGCATCATGATTTCTCGACTTTCCTTGCATCTTGCGAGTCGTAA
TTTTGGAGGGTCCAGTCCCATAGTTGGCCGGGGATCCTCGACGAAATATA
CTTTCGACAAACTTTTAGTTTGGCTGCATGATTTGTATGCGGGCTCATCT
AAGTTCTTAATTTCGAAATTATTCGGTGATTGTgcgaaaataatgaaatt
gtcCTCCTTGGTGAATCTGTTTCCATTTACCCAGGCGCCCGTTTTGTAAA
AATCACACTCAAAAAGTCCGGTCGCGCCCGGATAAACTTCGATGGTCCGG
AAATTATTTTGACAAATCAGCGTTAGACATTCTTCTGGTATTTGAACTGT
TGCCGTGAAAAAAGGTACTATCTTTCTCTCGATGTGCGTCACCGTATTTT
CCtcgtttggtgacgtcattttatcggCCGGCTTTTTGGTTGGTGTTATT
ATCTGTTGCTGGGCAACCGACCATTCGATTCTCATACCGTTCAGTCTTGC
GATGCTGTTCCTGGGTGGTGCTGCTGGTGGAGAGCTGGCATCTGAAAGCA
TGATTGTCTTCAAGAAAACGAGAACTGATAACAGATGCATATTGAATTTG
CAGTCCTTCTCTGGAGAAAGAAAGTTTGAGCTTGGATTTTTCCTTCTGTT
AATTCGGAAAGTGTCTTTCTTTTCCGTGGTTTTATGGGGTGAGCGATTTC
TGTTAAAATTTATTCGtccaaatc Run BLAST on NCBI protein sequence of TCONS_00036154-protein >TCONS_00036154-protein ID=TCONS_00036154-protein|Name=TCONS_00036154-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
FGRINFNRNRSPHKTTEKKDTFRINRRKNPSSNFLSPEKDCKFNMHLLSV
LVFLKTIMLSDASSPPAAPPRNSIARLNGMRIEWSVAQQQIITPTKKPAD
KMTSPNEENTVTHIERKIVPFFTATVQIPEECLTLICQNNFRTIEVYPGA
TGLFECDFYKTGAWVNGNRFTKEDNFIIFAQSPNNFEIKNLDEPAYKSCS
QTKSLSKVYFVEDPRPTMGLDPPKLRLARCKESREIMMLAKPNILSENER
TDNVFSSHFWIGLDQMDMIANPFTHKDMILEFKRGNQGVQERVRASFQLS
DNSKTLKFTTILSGRTDILPLGVNLHFGGCPKKTKFWWYEDSKLKCDDMN
YGDCPLIKIDGVTCLKITILL Run BLAST on NCBI transcript from alignment at sc0001418:14799..15922 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036154 ID=TCONS_00036154|Name=TCONS_00036154|organism=Clytia hemisphaerica|type=transcript|length=1124bp|location=Sequence derived from alignment at sc0001418:14799..15922 (Clytia hemisphaerica)
gatttggaCGAATAAATTTTAACAGAAATCGCTCACCCCATAAAACCACG
GAAAAGAAAGACACTTTCCGAATTAACAGAAGGAAAAATCCAAGCTCAAA
CTTTCTTTCTCCAGAGAAGGACTGCAAATTCAATATGCATCTGTTATCAG
TTCTCGTTTTCTTGAAGACAATCATGCTTTCAGATGCCAGCTCTCCACCA
GCAGCACCACCCAGGAACAGCATCGCAAGACTGAACGGTATGAGAATCGA
ATGGTCGGTTGCCCAGCAACAGATAATAACACCAACCAAAAAGCCGGccg
ataaaatgacgtcaccaaacgaGGAAAATACGGTGACGCACATCGAGAGA
AAGATAGTACCTTTTTTCACGGCAACAGTTCAAATACCAGAAGAATGTCT
AACGCTGATTTGTCAAAATAATTTCCGGACCATCGAAGTTTATCCGGGCG
CGACCGGACTTTTTGAGTGTGATTTTTACAAAACGGGCGCCTGGGTAAAT
GGAAACAGATTCACCAAGGAGgacaatttcattattttcgcACAATCACC
GAATAATTTCGAAATTAAGAACTTAGATGAGCCCGCATACAAATCATGCA
GCCAAACTAAAAGTTTGTCGAAAGTATATTTCGTCGAGGATCCCCGGCCA
ACTATGGGACTGGACCCTCCAAAATTACGACTCGCAAGATGCAAGGAAAG
TCGAGAAATCATGATGCTTGCGAAACCGAACATCCTTTCGGAGAATGAAA
GAACAGATAATGTCTTTAGTTCCCATTTTTGGATCGGGCTTGATCAGATG
GATATGATTGCGAACCCATTCACACACAAAGATATGATACTTGAATTTAA
AAGAGGAAACCAAGGTGTTCAAGAAAGAGTAAGAGCTTCATTTCAACTCT
CAGACAATTCAAAAACTCTCAAATTCACCACTATCCTTTCAGGTCGAACA
GATATTCTACCGTTGGGTGTGAATCTCCATTTCGGTGGTTGTCCAAAGAA
GACGAAATTTTGGTGGTATGAAGATTCGAAACTAAAGTGTGACGATATGA
ACTATGGCGATTGTCCACTCATAAAAATTGATGGAGTCACGTGTCTTAAG
ATAACTATTTTATTGTAAGCAACG Coding sequence (CDS) from alignment at sc0001418:14799..15922 >TCONS_00036154 ID=TCONS_00036154|Name=TCONS_00036154|organism=Clytia hemisphaerica|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0001418:14799..15922 (Clytia hemisphaerica)
tttggaCGAATAAATTTTAACAGAAATCGCTCACCCCATAAAACCACGGA
AAAGAAAGACACTTTCCGAATTAACAGAAGGAAAAATCCAAGCTCAAACT
TTCTTTCTCCAGAGAAGGACTGCAAATTCAATATGCATCTGTTATCAGTT
CTCGTTTTCTTGAAGACAATCATGCTTTCAGATGCCAGCTCTCCACCAGC
AGCACCACCCAGGAACAGCATCGCAAGACTGAACGGTATGAGAATCGAAT
GGTCGGTTGCCCAGCAACAGATAATAACACCAACCAAAAAGCCGGccgat
aaaatgacgtcaccaaacgaGGAAAATACGGTGACGCACATCGAGAGAAA
GATAGTACCTTTTTTCACGGCAACAGTTCAAATACCAGAAGAATGTCTAA
CGCTGATTTGTCAAAATAATTTCCGGACCATCGAAGTTTATCCGGGCGCG
ACCGGACTTTTTGAGTGTGATTTTTACAAAACGGGCGCCTGGGTAAATGG
AAACAGATTCACCAAGGAGgacaatttcattattttcgcACAATCACCGA
ATAATTTCGAAATTAAGAACTTAGATGAGCCCGCATACAAATCATGCAGC
CAAACTAAAAGTTTGTCGAAAGTATATTTCGTCGAGGATCCCCGGCCAAC
TATGGGACTGGACCCTCCAAAATTACGACTCGCAAGATGCAAGGAAAGTC
GAGAAATCATGATGCTTGCGAAACCGAACATCCTTTCGGAGAATGAAAGA
ACAGATAATGTCTTTAGTTCCCATTTTTGGATCGGGCTTGATCAGATGGA
TATGATTGCGAACCCATTCACACACAAAGATATGATACTTGAATTTAAAA
GAGGAAACCAAGGTGTTCAAGAAAGAGTAAGAGCTTCATTTCAACTCTCA
GACAATTCAAAAACTCTCAAATTCACCACTATCCTTTCAGGTCGAACAGA
TATTCTACCGTTGGGTGTGAATCTCCATTTCGGTGGTTGTCCAAAGAAGA
CGAAATTTTGGTGGTATGAAGATTCGAAACTAAAGTGTGACGATATGAAC
TATGGCGATTGTCCACTCATAAAAATTGATGGAGTCACGTGTCTTAAGAT
AACTATTTTATTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036154-exon-sc0001418-1491911889:14799..15922 | TCONS_00036154-exon-sc0001418-1491911889:14799..15922 | Clytia hemisphaerica | exon |
| TCONS_00036154-exon-sc0001418-1510915933:14799..15922 | TCONS_00036154-exon-sc0001418-1510915933:14799..15922 | Clytia hemisphaerica | exon |
| TCONS_00036154-exon-sc0001418-1575043694:14799..15922 | TCONS_00036154-exon-sc0001418-1575043694:14799..15922 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001418 | supercontig | sc0001418:14799..15922 . |
Blast
The following BLAST results are available for this feature:
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