TCONS_00036111 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036111
Unique NameTCONS_00036111
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036111 ID=TCONS_00036111|Name=TCONS_00036111|organism=Clytia hemisphaerica|type=transcript|length=1284bp
CCCGTCTATTATTTTTCAACTGTCCAAAAAATGCTGTAGCTGCGCGACGA
GTATTCCAAACAAAAGACATCTTTTCAAAACGACAGACCACCGAAGAAAA
GTCGCAGCTTCActgaaattttataaaaaaAATGAAAGTTTACGCAAGAT
GTGTGTGGCACGAGGGTAACGATCAACTTGAGGAAGAGGAGACTCTTTTG
GGAACTTGGGTGGATGAGAAGAACCACACTATTCGTTGGCCAACACGGGT
CAATGTGCTAAGAGCATTGCGGGAGATGCGGGATCCAGAACCCCATTGGA
AGACTTTCACTTTGATCAAAGTCAAGTTATGGAGTAAAGTAAAAACACCT
TTATCTGGGAAAAGCGCCAGCAGAATTCCTACGGACAATGAAAGAAATGT
CACCCATTCCCCAGCTGGCTCTAGCAGTTGGTTGCTTTCCAAGCCAAACA
AAAGCAAATTTCCACTGCAGGAAGCAAATTACCAATATCGAACAATCTCC
CTATTAGTGGAAATTTTGGAGACACTAAAAAAGATGTCAACCGGCATGGA
TGTCGAGGGTGACGAGGATGTACAAGTGTGTGGGTCATTTGAGGAGCTGG
ACGAGTTTGAGAGCATCCTGTCCCAAAACACTCATAGAAAGAAAATACTT
AAAAATTTATCGAAGATTGGCGGAcagcaatttgaagaaaacacAAGAAA
TGTGATGAGAAAGTTGATGTCAAATGGCCTAATGTCGCAGATGAATAAAG
ACGGGCAAAGAGGGAAGCGAAGATTTCTCGATTTCGAACGAGTCGTAGAA
CTTATCAAAGACGCAGTTTTGATCAACTTTCCACCTTCGTCTGATGGTAC
TCCGAAGGTAACAGGGGCCCAAGTTGAAAAATACATGGGTATGGTTTTGA
AGCGAGCCCCCGATCGAAAGGGAGGTGCAGGAAGACCTGAAAAAGTAGAC
TTCGAGAAAGAAAATGTGAGTGACCAAAATACAAGTGACCAAAATGCGGA
TTCGGAAGTAAAGAAAGTAGTGTTCGACGAATCCGAAGAGTAACTACAAA
TATAAAgtaattttttggacctaccccggttgggttggaggtcctataaa
ttaacctttgtccgttcgttcgttcgttcgtccgttcgttattacctttc
ctcgtgattgactcgttagtttttttctgattttttgcacaaagatgtgt
aaacaactataaaccctcgaatatgacggagcccgattttcgaaaaacaa
aatttttgggcaaatttgggccaaaaaacgggtt
Run BLAST on NCBI

transcript from alignment at sc0001414:37079..48163+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036111 ID=TCONS_00036111|Name=TCONS_00036111|organism=Clytia hemisphaerica|type=transcript|length=11085bp|location=Sequence derived from alignment at sc0001414:37079..48163+ (Clytia hemisphaerica)
CCCGTCTATTATTTTTCAACTGTCCAAAAAATGCTGTAGCTGCGCGACGA
GTATTCCAAACAAAAGACATCTTTTCAAAACGACAGACCACCGAAGAAAA
GTCGCAGCTTCActgaaattttataaaaaagtaagtAATAAATTATGTAT
ATGTTTTGAGATTTAGACTGATCATTTTGTTTTTAGCCTGCAAATATTAA
AGCAGAAACTGAAAGTAAAAGTACAAAGTTCATATTCCATGAACAACAAC
AAAGCCAAAGCCTTAGCATTTCGTGTCTCTCTTTGAAGTTGTTGCTCTTC
TTGTTAGACTGGATTGTTATTTGAGTGGTTGTGCTAGTGGGATCAACTGT
ACTGTAAGTTTATTTGACGATTGTGTAAAGGTTTTCCAACTAAATTTTTA
AGTTGAGAGGTGAGAAATTAAACATAGCAACACATCCTTTATTTTGCTAC
CAAATATCAAATATCTTCAAACACAGAAAGATCAAACAAAAAGAAACCTT
AAAAATTTCCTtataagtttatctttcttaaCCTATGCTTTGGCCAGGTT
GTCCTCCGACCGACTCAAAGTATTTGTGAGAAAGATGCTTAATTTGtcca
ggcccaattgattgtttggttcgtgtcctagagagtagaagctttgaaaa
attggtcggtcggtcggtagctaaaattggaacctttttttcattttcct
accaaaaacctcaatttttaaaattcctCAAGCAATCGCGCAATCCTGGA
ATCCAACACCGCAAATGTAAAGAAATAGCCTAAAGCCCAGATCCACAAAG
ACACGCATCGCGATCGTAAGATAACTTCTAGTTGGAGATTAAGGCGTTCA
CGGCGTGTGCTTAAAGGAATACAGCTGTGACTCTCTGCTTTTAGGTGCTT
AATATTTGTTTTAAGTAGGGGTTACACCGGGACATTTTCTGTGCGCAAAG
AGGATATTGTTTATAGAAGAATCAAAGCAGTCAGTTAAAAAAGAACTGCA
GAGATAGCAGTTATCATGTGAAAAGGaggtaaaatttttttgatttttcc
gactcaaagtgaaacacttttcctcaaaaatttagagtcggtcggaggac
acgaaccaaactatcaattgggcctggccttttgagtcagaaaaatttct
tctttccCCCTTTTCATGTgattgacatttttttctttaacaaCATCCAC
TTCGTGCACAGaaacaaaatataacattttttaagcaCCTAAAAGTAGAG
AGTTGAGACTGTATTCATTACAAGAACACGCATCAAACGTCTCAATCTAC
AAATGTAGAAGTGAATTTTTTGATTATTACTTGCCTTTGTGGATGCGTTC
TCCTAAACCAATACCGTATGGGGTACAGGTTTTTAATCCGTCATGTTTTt
tcaatgatacaaaatagtaAGCAACAAACCTTTGATCATACGATTGCAGA
ACGTATAAAACATTCCAGTTGACAACCATACTGCAATTTTAATTATTTCA
TCTTGTAAAACATTGACATTGACATTGTTGCATTAATaattacaagcaaa
aaaaaattcaataacaaTTTAATTACATGCACGTTTCAACAGTTCGAagt
cataaaaatcaaaatgaatttgatctTGCAATGTTTTTTGCGGGTGCTAA
AAGACAAGCTTACAGACAAACAAGAAGCTTCGgtcaagttaaaaacatta
caGTATGTAACAGCTAATTTGTACCATCAAAACAAATCCTATTTATACac
tttttttctagtttttttttagCTTATATTTAAATACAATtataatattt
aattttcaaagcaATCATATTTGTTTCCATTGTTATGAAATTGTTCAGGT
CACTTTGGCGGCTAAATAGACATGGTTACTTGGGTGGCTAGTTTTTTCAT
GGACCGTCTTTCATTGTTATGTAGTAGTTCAGGTCACCTTGGTGGCTAGG
ATAGGCATGATCACTCTGGTGGTTAGCTTTACATAACTTCTAAATTTCTT
CCCTGCTCATGAATACGTACCCTCCTTTCATTATTAATAAGTGGTGTATG
TGACCCGTGTTACTGAAATAGGCAAGGTCTTTCTAGTAGTCTACTATCTG
TGATTTTTAAAATGCTTCCctttttatgaattttgttttcaatgTTATGA
AGTTGTTCAGGTCAGCTTGGTAGCTAAAAAGACATCATTACTCAGGTGGC
TAGCtttgtgattttgaaatttcccctTTTTATGGACTATCTTTTCATTA
ATATGTAGTAGTTCAGGTCACCTTGGTGGCTAGAATAGGCATGATCACTC
TGGTGGTTAGCTTTACATAACTTCCAAATTTCTTCCCTGCTCATGAATAC
GTACCCTCCTTTCATTATTAATAAGTGGTGTATGTGACCCGTGTTACTGA
AATAGGCAAGGTCTTTCCAGTAGTCTACTATCTGTGATTTTTAAAATGCT
TCCctttttatgaattttgttttcaatgTTATGAAGTTGTTCAGGTCAGC
TTGGTAGCTAAAAAGACATCGTTACTCAGGTGGCTAGCtttgtgattttg
aaatttcccctTTTTATGGACTATCTTTTCATTGATATGTAGTAGTTCAG
GTCACCCCGGTGGCTAGAATAAGCATGATCACTCTGGTGGTTAGCTTTAC
GTAACCTACAAATTTCTTCTCTGTCTACGAATTTGTGCCTCAATTTTGTT
GCTTGAATAGGAACAGTCATTCCAGAAGTTGAGACAACTCTGATCTTTTT
GCTTTCTATTGATTTAACTTTCTTAAAATGCTATAAAATATTGTTCCCAC
TAGTCAATTACTTTCAATAGAATCCTGGCTTTAGGGCAGAGCTCTATCAC
ctaaaaaagagaaatgaaGAATTGCTAAGGGCAAGTGTGGGGATTTTCAC
TTTAATTAGATTTAATTCAATTGTAGTGAGCTTTGTTTTGCTTTGATTCA
CTTTCAGTTATGTATATATGGCTTCTCGTTTGAAGAAATGGAgggaaaaa
cagaaaaagattTGTCGATACCTTGAAGAGAGTGATGAAGAAATTGAGGA
CGATTTTGTTAATTCATCAAGTATTGAACATGAAGACAATGATCCTGAAC
ATGATTACAACTATGAACTCAATATTCAGATATTGAAATGGattctgaaa
atgagtttgaccCTGAATATGATATTGGCGACTATATCATGTCAAGTGAT
GAGGATGGTGAAATTTTTGACATGGAAGAGCCATAAGAAGATGTTCAgat
tactttcaaccagtcattGGCAAAGTGTGCACTTGACAATGGATGGACAC
GCAACTCAATAGATCAATTGCTAAAGGTTCTTAGAAATCACGGTCATGAA
GAGCTACCCAAAACTGCTCGAACTCTTTTAAAATGTCCACGAGATATTGG
TGTTTCAAACAAATGTGGTGGGGATTATGTGTACCTTGGCTTAAAGGATA
ATATATTGAGAACTTTAAATGATGATCCATTGTCAAGCAATGATACATTA
GAACTTTTGGTCAATGTTGATGGTCTACCTTTGTTTAAGTCAAGCCCAAA
GTCTGTTTGGGGCATATTGTGTGTATTGAATAACTCTGAAGTTTTTGTTG
TTTGTCTGTATTACGGAAAAAAAAAACCAGATCCAGTTGATGAATATTTA
TTTGACTTTCTAACAGAGTGGCGTGAGGTTAGGCAGCATGGTATTGTGTT
CAATAATGACACTTATCGCTTTAGAATAAAAGCCTTTATGTGTGATGCTC
CTGCTTGTGCCTTTTTGAAGGGTATTGCTTACCACACCGCATACAATCCA
TGTGAAAGATGCACCATCAAAGGTGATTATGATGGCAGAGTGATTTTCAA
CAACTTTCCTGATAACCTGCAGTTGAGAACAGAAGAAAGGTTTTGTCAGT
TTGGCTATCCAGAACATCAACGCACTGTTTCTCCATTGGTGGGTGCAGAA
ATTTCTTTGATCAATGGCTTTGTCCTTGAGTATATGCATTTAGTCATGCT
AGGCGTTGTTCGCAGATATTTGACAGGTCTTGTACAACCATCGTTTGGTT
CAAAGTTGAGACTGTCAGCAAATCAAAAGGAGTTACTCAACTCTCATATG
ACATGTTTAAATggttccttgccttctgaattTAGCAGGCAACCAAGGCC
GTTAGATGAACTACAATATTGGAAAGCAACTGAATTTCGACAATTTCTTT
TATATGTTGGCCCAATTGTACTACATGATATCCTTTCATCTGATGCCTAT
GAGCACTTCATGTATTTGAGTATAGGGATTTCAATTTTGTTGAACACCAA
TGATGAATTTCGAACATCAAACATACCCTTGGTTAAAGAATTTCTCAAGT
GCTTTGTGTTAAACTGCAAGGCTGTGCTGGGAAATACATTTTGTGTGTAC
AATGTTCATGGCTTGTTACATTTACATGAAGATGCTGTATACCATCAATG
CTCGTTAAATGACATTTCCTGTTTTgcgtttgaaaattttttgcaaaaag
tgaAAAGATCCGTGAGAAGTCGACGGAGTCCACTTGTTCAAATTTGTAAA
AGACAGCAAGAAAGGTTTCGTTTTCCACTGAAAAAGTCAACTCATTTCAC
CAAAATAAGAATTAATTCATTAAAGGATGGTGTTTTCACGGATGGAGATA
GTGTACTATTTGTCAAGGAAAAAAATGGCGAGAACTACACTTGTAATGTT
TTTAAGAACCATCAAATGCATGATATTTTCTTTGACCCTTGCCCATCAAA
GTCATTAAACATCTTTCTTTTGAGAAATAATTTGAGACCACATTGTCAGC
GGGTGGTTACAAAAGAcagttttaaaagaaaaatggtttGTTTACCGAAC
AAAGATGGAAAATGTCTATTCCCTTTGTTGCATGAAATTGAAAGACACTA
AACTTAAGTTCTTCATTGATTTATCGANTTGAGACCACATTGTCAGCGGG
TGGTTACAAAAGAcagttttaaaagaaaaatggtttGTTTACCGAACAAA
GATGGAAAATGTCTATTCCCTTTGTTGCATGAAATTGAAAGACACTAAAC
CTAAGTTCTTCATTGATTTATCGActtgaattttaattatttaaaaTACC
GTTCATGATTTTGGTTCTTTTTGAATATAGTCTAGAGACATTTCTATTGC
ATCTATTTTATTCTGTACAGGTCCTTCACAGGTCTGTCCTTAGATTTGCC
AATATATCTAGATTTATCCCATTGTGACTGTGTATGCAAAATAGAGACTG
AGTGATATGACTGATTGAGTCAGATATATCTAAAAATGTGCACCTTATTT
TGTATAAACTTTGGCAGAGAGNAGTCAGATATATCTAAAAATGTGCACCT
TATTTTGTATAAACTTTGGCAGAGAGAAATATAAAGCATAATTTATCTAA
ATTAGTCCCCCTTTTCAAGACATCAAATTTAATGCATATTAAGTATCATA
ATTCAATTAGTTATACTTTTAAGAAGGCCCAACCTGTCATTAATTTAAAC
CATTTTCTAAAACAGCTTTGCTTTGTTCAGGTTTTGAAGTTTTTAGTGGT
GAATACAGCAGCCTACTATTACATTACGATAGGCgtttttttatgtttga
atGAATGTTTGAGCATATTTGACTGATTAAAACTCCTATTCTtacaattt
tgtcaattttcaccctgatactcttatagaagatattcttatttaaaaaa
aagtaatgtAACTTCGTGCTTCTAATTTTCGTATGTAGAATGAAAGTTTA
CGCAAGATGTGTGTGGCACGAGGGTAACGATCAACTTGAGGAAGAGGAGA
CTCTTTTGGGAACTTGGGTGGATGAGAAGAACCACACTATTCGTTGGCCA
ACACGGGTCAATGTGCTAAGAGCATTGCGGGAGATGCGGGATCCAGAACC
CCATTGGAAGACTTTCACTTTGATCAAAGTCAAGTTATGGAGTAGTAAGT
TTTACGATTATATGATACCCATTCCAATCAGCGAAATAAAAATTATAAAC
ATCAGGGTTTTTCTATAAGGTTTTTATCTCGAATCAACAAGACGTATCCG
AAAATTATTTCATATCAGGCATCATCAACAGATTAATTTGTACAAGCCTA
AGTTTAACAAATAGCTCAAGAATACTTTCTTTTTTCTTTCTTAGATAGCA
TAAGAGAATGTGACGAATATAACTTTACTACATCTGGTGAAACGGAAGAT
GATGAAAATACAGGTTATTTAATTTTCAACACTCCTATGTCACAGACCCG
GTGGGGCCCCCAACTCACAGGAAAATTTGATCAAAATTTCGACCCAAGTA
GGAAGAATACCCAACAAATTCAGCCCCACTGGAGTATTAACTTTTACTTC
ATCCACATTTGAGATTCATTGTAAAAAACCGCACTCCAAAACCGTCTCCA
CTGGATGTTTTGAGCTTTGGACAATAGAAGTTTTATCCCCATTTGGATTT
GAAAAGAAATTTTCATCCCGACTGTGAGAAAAAGGTTACTCAAAAAAGGT
TTCTCGAAAAAGGCATGTTAAGATCGTTAAATATCAAATGATATAATGTT
TGATCTTCATTCTCTGATATTAGCTGAAAGTGCCAAGATTCCGACAAAGG
AATTTCATACCAAACAAAACTCTTGTAAGTTACATATAGGAAGGGGAGTT
GATTTTTTTGTGCAAGACCTTTTTCCCGGATTTTATTTTACTTTTTTCTG
TGGTTGGTTCTTTGGAAAAGTTTCTAGTTTTTATCAAATTAAAATGTATG
CACAGAAAAAGGGTTCTGGGATCCCTTAGAATTTTTAGTGTGGTCTTTTT
AAACACCCCTGTCTTAATCAGCCGAAAACTTATAAACCTTTTGAGATACA
ATGAATGAGTTAAATATGCCAAAAGCGGTATTACATGCATCTTGCTTCCA
CTCAGTGGAGATTCTATTATTTACAGCTATAAAACTTTAGCGGAAATCCA
AATCCTTATTGTCTTTTCAATTCTTAATTTACTTGTACCTGGTACCTATC
TTATAAGTTATAATTGTTTTCTATTTCAGCAATTATTTCCAAGGTTGCAC
TTTCTGAATCTCCTGCGTCACCAGACACGTTCAAAAGTATTCGTAAGTCG
TTTGCCGATGTTAACACTTTATTTTTATTTTATTTGGTAATCTTTTGATG
AGTTTTGGACAAAATTTTGATCAAAATAATTATAGGTTGCTGTGAAGAAT
TTTCTCGTACACGTTTGACCAACTACCCTATTTTTTTTTAATTTGCAGTT
AAAAGACCAAAAATCAATTCGATTTCCAATAGCACCCATACGCACAGCAC
CGTTGAAAAGAGTAAGTTACACTAAATAGTTACATTTTAATTATTTTATT
TTGAAAATAAAGAATCTAGTATGTGATGACCCATTCAAAATTTTGACCAA
TCTCACAGTCATTTCGCTTTTGTTTCGTAGAAGAGATCTCTTCACAAAAC
AAACATCGAACTGAAGATCCGATAGATTATACACCACCTCCAAAGAAAGC
TCACACTGAAAGTAAGAATAAATTTCTATGATATCTATGTATTCAAACAA
AATACTCTTACTCCATGTGTCTTTTCAATGTAAAGTCGTAAGTTTGTACT
TCTACAGTACTTGCCAACTGATCATTGTATTATATAGTCTATAATATGAT
AAATTTTTATACAATTTCTTTATTTATAGAAGTAAAAACACCTTTATCTG
GGAAAAGCGCCAGCAGAATTCCTACGGACAGTAAGTACATTTTTATAATG
GCTTTCTGAGTATTTATTGGTTTTTATCATTAATTTGCTTTTCTCATCTA
AATGGAATTTTATCATTTCATGATATGCGCCACTGGAGAGTCTTCTGAGA
ACTTTTAAAATTTCCCACCTGTTACGTCACTTAAAAAATAGAAATTGTGA
CGTATTGAGTGGAAATTTTTGAAAATTCTTGGAAGGCTCATTAATATTAG
ACCTTTTTTACAGATGAAAGAAATGTCACCCATTCCCCAGCTGGCTCTAG
CAGTTGGTTGCTTTCCAAGCCAAACAAAAGCAAATTTCCACTGCAGGAAG
CAAGTAAGTTCATTTCTCTATTAAATAATATTGCATTAAATGTTACAAAG
CTTATACACTCAAAGGTCCTTAGTACTTTCTTATTTTCATATTTCTAATG
TAATTTTTCAGATTACCAATATCGAACAATCTCCCTATTAGTGGAAATTT
TGGAGACACTAAAAAAGATGTCAACCGGCATGGATGTCGAGGGTGACGAG
GATGTACAAGTGTGTGGGTCATTTGAGGAGCTGGACGAGTTTGAGAGCAT
CCTGTCCCAAAACACTCATAGAAAGAAAATAGTAAGTTATTATAATTAGT
ACTTTGCAGTCTGATTTTAAGTatcaatttttgcaaaaaaaaaattatgt
agcAAAAATCACACAGCTCTATGCAGAACGATGGTCCTGAGAAGACGCAA
TTAGTCCCGAGAAGACGAAATTAGTCCCGATAAGAATAAAAATGGGTAGC
ATTTATATCATAGTAGCCCTAAAGATTTAAGTATATGTGATCTAAAATAT
caattctcaaaatttaatcCATTTTATTATATGAAATAAATCCCGAAAAC
CCTTTCAAATTTAGTACTCATGCAAATCGAGAACTAAGTACTGACCCTCC
AATTCATTGATCAAAAGTTACTGAATGATGTGATGTTTCTTTTGTAGCTT
AAAAATTTATCGAAGATTGGCGGAcagcaatttgaagaaaacacAAGAAA
TGTGATGAGAAAGTAAGTATTTGATATCTTAGAGTACTGTGAAAGcaaat
tttgttatatttttctgaaaattgtatcatgcCCCTTCATCTTGTAGAGT
AGTCTTGAAGCATCGCTTAACCTTTAATACATATTGATATCTTCTGTTAA
CACTACAGGTATTTTGCCATATATGACCTTATATTCGATTAAAATTCTAT
ACATCATTCTTTCTCAGGTNCCCATATATGACCTTATATTCGATTAAAAT
TCTATATATCATTCTTTATCAGGTTGATGTCAAATGGCCTAATGTCGCAG
ATGAATAAAGACGGGCAAAGAGGGAAGCGAAGATTTCTCGATTTCGAACG
AGTCGTAGAACTTATCAAAGGTGCAAATGCTTTCttatacttttattttt
agatacAATCTAAATTTCAGCTCAAACATACTCAAACTAACATGATATAT
AATTTATCGCAACCACCaaataatttgattattttcgctaaatctgtacc
gtgtcccgtccgaaatTAAGTTCTAACGAGGGTAATGTGCGATGTGAAAT
CAAAGAAAGCTTTTTAGTGAGTTTTTTCTGCctttgttcgattaaaaaag
ACATCTCTTTTctagttttgatttatttagtcgtgaaattcgcgaaattt
gatccacgcgaaatttttaaattcttctctcgcgaaaattagacacgcga
aaatttatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTCATTCTTTCTCAGGTTGATGTCAAATGGCCTAAT
GTCCCAGATGAATAAAGACGGGCAAAGAGGGAAGCGaagatttttggatt
ttgaacGAGTCGTAGAACTTATCAAAGGTGCAAATGCTTTCttatacttt
tatttttagatacAATCTAAATTTCAGCTCAAACAGACTCAAACTAACAT
GATATATAATTTATCGCAACCACCaaataatttgattattttcgctaaat
ctgtaccgtgtcccgtccgaaatTAAGTTCTTACGAGGGTAATGTGCGAT
GTGAAATCAAAGAAAGCTTTTTAGTGAGTTTTTTTCTGCctttgttcgat
taaaaaacacATCTCTTTTCTAATTATGATTTATTTAGTCgtgaaattcg
caaaatttgatccacgtgaaaattttaaagacccttgattcgcgaaattt
aatctacGCGGAATCTTGAAATTCTTCTCTCGCGAAAATTagacacgcga
aaatttatccacttaagttAAATAAACATGTTTACTATCACGTTCCCATA
TTTGTCACCTTGATGAAATTACCAAAGTTCAGTCCAATAAAGAATCATTT
CTCAGAGATGTTGTAAATAATGTTATAAGGATAGAATGAAGGTGATAGAT
AGGTCATGGGAAGTAAGATTGACAATCATCCGTTTATTTGAGTAATGTAT
TCATTTTATAGACGCAGTTTTGATCAACTTTCCACCTTCGTCTGATGGTA
CTCCGAAGGTAACAGGGGCCCAAGTTGAAAAATACATGGGTATGGTTTTG
AAGCGAGCCCCCGATCGAAAGGGAGGTGCAGGAAGACCTGAAAAAGTAGA
CTTCGAGAAAGAAAATGTGAGTGACCAAAATACAAGTGACCAAAATGCGG
ATTCGGAAGTAAAGAAAGTAGTGTTCGACGAATCCGAAGAGTAACTACAA
ATATAAAgtaattttttggacctaccccggttgggttggaggtcctataa
attaacctttgtccgttcgttcgttcgttcgtccgttcgttattaccttt
cctcgtgattgactcgttagtttttttctgattttttgcacaaagatgtg
taaacaactataaaccctcgaatatgacggagcccgattttcgaaaaaca
aaatttttgggcaaatttgggccaaaaaacgggtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021230XLOC_021230Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036111-exon-sc0001414-1491911889:37079..37208TCONS_00036111-exon-sc0001414-1491911889:37079..37208Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:37079..37208TCONS_00036111-exon-sc0001414-1510915933:37079..37208Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:37079..37208TCONS_00036111-exon-sc0001414-1575043694:37079..37208Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:42817..43022TCONS_00036111-exon-sc0001414-1491911889:42817..43022Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:42817..43022TCONS_00036111-exon-sc0001414-1510915933:42817..43022Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:42817..43022TCONS_00036111-exon-sc0001414-1575043694:42817..43022Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:44758..44808TCONS_00036111-exon-sc0001414-1491911889:44758..44808Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:44758..44808TCONS_00036111-exon-sc0001414-1510915933:44758..44808Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:44758..44808TCONS_00036111-exon-sc0001414-1575043694:44758..44808Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:45042..45131TCONS_00036111-exon-sc0001414-1491911889:45042..45131Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:45042..45131TCONS_00036111-exon-sc0001414-1510915933:45042..45131Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:45042..45131TCONS_00036111-exon-sc0001414-1575043694:45042..45131Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:45240..45409TCONS_00036111-exon-sc0001414-1491911889:45240..45409Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:45240..45409TCONS_00036111-exon-sc0001414-1510915933:45240..45409Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:45240..45409TCONS_00036111-exon-sc0001414-1575043694:45240..45409Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:45776..45840TCONS_00036111-exon-sc0001414-1491911889:45776..45840Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:45776..45840TCONS_00036111-exon-sc0001414-1510915933:45776..45840Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:45776..45840TCONS_00036111-exon-sc0001414-1575043694:45776..45840Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:46101..46198TCONS_00036111-exon-sc0001414-1491911889:46101..46198Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:46101..46198TCONS_00036111-exon-sc0001414-1510915933:46101..46198Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:46101..46198TCONS_00036111-exon-sc0001414-1575043694:46101..46198Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1491911889:47690..48163TCONS_00036111-exon-sc0001414-1491911889:47690..48163Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1510915933:47690..48163TCONS_00036111-exon-sc0001414-1510915933:47690..48163Clytia hemisphaericaexon
TCONS_00036111-exon-sc0001414-1575043694:47690..48163TCONS_00036111-exon-sc0001414-1575043694:47690..48163Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001414supercontigsc0001414:37079..48163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.528419	0	0	0	0	0.430067	0	0.550477	0.922839	0	0	4.16775e-09	0	2.34878e-09	1.40461	1.62656	0.029531	7.61648e-07	2.38451	0.935565	2.23663	0	1.62563	0	0	0	0	0.496451	0	1.61681
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036111 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top