TCONS_00036071 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036071
Unique NameTCONS_00036071
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length922

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036071 ID=TCONS_00036071|Name=TCONS_00036071|organism=Clytia hemisphaerica|type=transcript|length=922bp
GAAACAGGCTAATAGAGTCAGGgttgtttttaaattcaaagACGGTCAAG
CTGTTGATGAAGAAGTTGGTATAGATCATGAATATGATGCCTTGTTATGG
ACAGCACCAGAGCATTTGGATAATATAAAAGAAGAACGATCTAAGGAAGG
CGATGTTTACAGCTATGGAATTATCTTACAAGAAATCATAACCAGAGGGT
CTCCATATTCGATGTATGAAAACTTGTCTGCTAAAGAAATCCTTGACCGC
GTGAAGAAATGTTCAAACCCTCGATTCCGGCCGGTCGTACCGGAAGATTA
CGGACATCCCGAGTATCATGATCTGATGAGTCAGTGTTGGGAAGAAGCTC
CTACGTCACGGCCTCGTTTTgatgaaatcatgaaagctcTGAAGAAACTA
AACGGGGGAAAGAACATTAACATCGTGGATAATATGATTAAAATGATGGA
GAAATACACAGACCATTTGGAGGAGTTGGTAGCAGAACGAACAAAGCAAT
TGGAGGACGAGAAAGCCAAAACAGATGAATTGCTCTACCGAATGTTACCG
AGAACAGTAGCAGAACAGCTGAAACATGGAGAAGCAGTGAGCGCTGAGAC
ATTTGATATGGTGACAATCTTTTTCAGTGATATTGTTGGGTTCACCAAAC
TGGCTGCCGAATCCACTCCAATGCAGGTTGTTGATTTGTTGAACGATTTA
TACACGTGTTTTGATCAGATCGTCGACCAACATCATGTTTATAAGGTAGA
AACAATTGGAGACGCATACATGGTGGTGAGCGGTCTCCCCGAACGAAATG
GAAATCGACACGCAGGTGAAATCGCACGCATGTCTCTCGACCTGTTGAGT
GCAACAACCACTTTCGTTGTGAGACATAAGAAAGAGTATCGCATACAGCT
AAGGATTGGCATTCACTCAGGT
Run BLAST on NCBI

transcript from alignment at sc0001410:27604..48984-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036071 ID=TCONS_00036071|Name=TCONS_00036071|organism=Clytia hemisphaerica|type=transcript|length=21381bp|location=Sequence derived from alignment at sc0001410:27604..48984- (Clytia hemisphaerica)
GAAACAGGCTAATAGAGTCAGGGTTGTTTTTAAATTCAAAGACGGTCAAG CTGTTGATGAAGAAGTTGGTATAGATCATGAATATGATGGTAAGTTTTCG GTCAAAACTCTGTTATTTTTGATTGATTAATTGAGGCAAGGGGTGACTTT TTCATATAAAAGCATTTCGAACGAGACAGGGTAATAGAGTCAAGGCTTGT ATTTGAATTCAAAGACGGTCAAGCTGTTGATGAAATAAGCCGGAATTGAA TACGATGGTAAGGTTTCGGTCAAATCTCTGTTATTTTTGATTGGTTAATC GAAGCAAAGGATGACTTTTTTTCATATAAAAGCATGTCGAACGAGACAGG GTAATAGAGTCAAGGGTTGTTTTTAAGTTCAAAGACGGTCAAGCTGTTAA AAAAGTCGGAATTGAATATGATTGCAAGTTTGATGTCAAAACTCTGTTAT ACTTGTTTCGCTAATCGAGGCAAATAGAGTGCCTAAAAACACAAAAGCCT CTAAAAGTAAGCATAGGTCAAAGGTTAACCCGGGGTCCACTTAAGGCTTT TTTTTTTGTAGACTGACCGGGACGATTTAGTGGCCCGGTAGTACATGGTA ATATTGCTTTTGCTTAGGTGGACTGTAAAACAATCCGCTAGATTTTAGTT GTAAAAAATGGATGAGGCAATAATGTTTTTATTAACAAATATTACAGATC TGTTATTCATGTTTGCTCCCGAATCTTAATTATATTTTTCAGCTCCAGGT TTTTTGTTATCTGAAATTTTTGTGCTTTTCTTTCAAAATGGCGACCTCGT CAAATGCGCCTGGTCTAGTCGGTATATCGCGATAGATTTAGAAAGCCCCC TAAGTGGTTTGCGTGATGACGTAATAGGAACTTCTTTGTAGCGTGATTAC GTAATTTTGAATTTGTTTTCGTGATAACGTGATCAGGGGCCAAAACTTGA TCGTGATTTGAAAAACTTTTGAGCCGTGATTCGTGATTTGGACTTTTTCA AAGGGGAACGTGATTATACAATTTTTTTGCTGATTTGCGTGACCGTGGTT GAAGACAAAAATTTGCGTGATATCGTGATCAGAGTTAGCCTCATTTAGTA CTCAATTATTATTGGGCTCTTCCAGAAAATGTACATGGGGGGGGGGGAGG ATATACAGGGGGTAGCGAAAAATAATCAAAATTTGCCTTGTCCGGGTAAA TTTGCTCTTTCCGGGGGGGTCAACTGATGTTTTTCTGGGAGTAAAACCCC TTGTCCGAGACGCTAAAAGTCACTTTGTCCGGTTGGTAAATCACTGAAAA TTATTATATCCTCCACCCCAATATTCAATTTTTTTCTGGAAAAGCTGACA TACAACATTGTTTCAGCGTTCATCTAACGTTATATGGATGTTATGAACAT TAGATAAACGTTGAAACAACGTTGTGTCTTTTATTCTCATTCTAGCCTTG TTATGGACAGCACCAGAGCATTTGGATAATATAAAAGAAGAACGATCTAA GGAAGGCGATGTTTACAGCTATGGAATTATCTTACAAGAAATCATAACCA GAGGGTCTCCATATTCGATGTATGAAAACTTGTCTGCTAAAGGTATGTTT TTTAAACTCGGAATTCATGAGTTAGAAAAACCAAGTTAGATGAAAACCGA GTTAGCAAAAAACTGAGTTAAGGAGTCAGCTAACGAAAATTTTGACGTCA CAAATAAAATATCTAACTCGATTTTTTTTGTCAAATTAAAATTTTCGAGT TAGCTAACTCGATTTCTTTTGTCAAATTAAATTCTTTCCAAATTTTCGAG TTAGCTAACTTGTCTGCTAAAGGTATGCTTGTTTATTTGGAATCATATTG CCAACATGCCAATATGACGTTATTTCTTAAGTTGTTTAGGACACCCCTGT GCCAACACCCGCTGGGACCCCACCCCCACTGGGAAATTTGGCAAAAATGC ATCCGCGGCAGGAAAAATTACCCTGAAATTTCAGCCCCACTGGGAAATTG ACTTTGATTTCACTCCCCATTCGAAATTCAATGTTCAAAAATTGCACTCT AAACCCATCCCCACTGGATTTTTTAACCTTTGGAACAATAGAATTTCTAT CCCAATTGGGATTTTAATAGATGTTTTTATCCCACTGAAGAAAATGTTCC ACCGGGGCTGTGAGACAGGGCTGTTTAGAGCTTTTATTGGAGCTACTAGA AAGTTCGGTGTTATCAAAAAAATGCGACAGGGGTATCACTAAATTGTGTT TTCAATAAAAACTGCTGTGTCCCCTGATTTTGCATACTTTTAAGCTGAGA AGAATATACAGAACAGGGGAATCTCTTATTACAGAGTTCAAAAAATAATA ATAAATATCATCGAACGGTTTCGAGCAGAACAACTGCAAATAGTCAGAGC AAGGGGGTCAAGTTAATCGTTCTGTATGATGATTTTAATTCACTAATTGG GACGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAC CAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCGTCATTTTTAT TACTTCTAATAACCAATTATTAAGGTATCTTATAAAATCTCCATCTCATC TGCACTAATTAATAGCATGAATAAAAACCTGGTCTGGAAGTCGGGTTGTC TTTTTTTTCGAGGATGAAATATTTTTTACCCATTCGTTTTGGTCGTGATC AAAATTGACGTCAGAGATTGGTCAATAACTTTTGGAAGCCACTGCAGTGG AGTAGCTGTTGCCACGTCACCCAGCAAAAATTCTGTAGATCGCCCATTTG TTTTGATCACGACAAAAATGCAACCTTTTTGCTTGCGTTTCCTGACCTTA AAGTTAGGAGACTTCTTATGTATACTGACTTCAAGAAATGACAAGTGCTA TGGGGAGGCTTAAAGAAGAATTAATGCAAATCAGATTTGAAAGTTTTAAA AAAAATCTAACTTATTTTAGAAATCCTTGACCGCGTGAAGAAATGTTCAA ACCCTCGATTCCGGCCGGTCGTACCGGAAGATTACGGACATCCCGAGTAT CATGATCTGATGAGTCAGTGTTGGGAAGAAGCTCCTACGTCACGGCCTCG TTTTGATGAAATCATGAAAGCTCTGAAGAAACTAAACGGGGGAAAGTAAG TGTGCAACTCACAACGTTGTTTCAATGTTCATCTGACATTATATGGACGT TGGGCAACCTCGTTCCCTTCTGTGTAATATCAGTTTTTTTATTGCTTACT GATAGCGCTAGATAATACCCTGGCATTAGCTGGTTTTCGAACGCGTAAGA TTTCGTAATCCAAAAATAAAACGTCAGATTTCATTCGTTCTTCTTTTTTG AAGCCGTTGCATTTCAGTGTAACTTTGTAACGTCAGATTTTTTATGACGT ATTGTTTTGAGAAGTTCCCCCTCTGAGAGGGGAACTCGCATCAGCCAACA CCAGGGTATTTTCTGGCGTCTATCAGTAACGTAAATAAAGCCTGGAATAC ACGGGGACGAGGTTGGGACCTTGGGAACATTATAAAAACGTTGAAAGAAC GTTGTGTGTCAGCTGGGTGTGTTTTCTTAAACTTTTTCAAATGGTCTTCA AGGTCTTTCTTTCTATTTCATTTTGCTTCCTTGAACTGCAACTTGAAGTA CACTGCATCACCTATTATGTCTTTTGTCAACATTATCCCCATAATATTTT CAAATAGAAAAACCCGACATTGTATGTAACGTGATCAAAATGATGGAGAA GTACACGACATCTCCAAGAACCCAATTTTTGTCCCTCTATTCAACAATTC TTAATATTTTCCATGAAAACATCAGCATTTTAAATAACTTGATCAAAATG ATGCACATCAAATTATCTCTTTAGTGCAATATTACCTTTTCACATATTTC TCGCTAGAAACGATCAATATCTCTTTAACATTTTACTCATTAGAAACATT AGCATCATTGATAAAATACAGTAAAACCTCTAATTAACGGACACTCTAAA AGGCAGACACCTCTGATTAGCGGACAATTATATTTTCCCCAGCCGTTTCC TTGTCAAATCCTCATAAAAAAGTTTCTAAAAGGCGGACACTAAATTAGCG GACGCTCTGATTAGCGGACAAATTTTTTCGCACGAAATGGCCAAAACCCC TATTTTAGCTCTCCAATTAGCGGACATTGAATATCAAACGGGTCGAGAAA CGGGTCACAAACGTCCAAAATCGAAAAAAAAATTTTTAGATATTTTTATT TCAAGCACTTATTAGTCTTATTATTCAAATTATTTCTATAAATTTCCAGA TTTCCCTTTACCCATTCAACGAATTTAGGTGGGCCAAAGAAATCATAAAT CACTGATTTTCTTTTATTTGTTAAAAACTAAATTGTTGCGTTTAATAACC TTTCTCTTGTTCTTCTAGGGCCTAGTGTCTGCAGATAAGTACTTTAGACC AAAATTTTGTATTTTCGACACCCTGGGATGGCCTAATTTCAAAATTGGAG CTCTAAGATCAAAAGTTTCTAAAAGGCGGACGCTTCTAATTAGCGGACAC TAACCCCTTTCCCCGATGGTGTCCGCTAATTAGAGGCTCCACTGTATGAT CAAATTGACATAGAAGTGCACTACATTTCTTAAATATTAATTGTTATCTC TATAATGCAACATTATCTCCCCGGGGGGGGTACTACCCTTGTCGACCGAC GGGGGTGCTCCGCCGAGGTTCGAAAAATGGACCCTACGTGGGACTCGAAA TTTGCGAAAAAAGTGACACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGACCCTACCAGGGACTCGTGGAGGTTAAAAAAGGTACC CTGACCAGCGGAGCATCCCCGTAACCCATTTTGCCCTAGTACCCCCCCCG GGATTATCTCCTTAATATTTTTCTCATTAGGAACATTAATAACATTGTGG ATAACATGATCAAAATGATCAATCAAATTATCTCTATAGTGCAACATTAT CTCCTTAATATCGTTTTCCGTTTCTTCCATTTTCGATGTTAATGTTTTCT TTATTCGTGCTGCACATTATGACTAGGCTCTTCAGTCACGTGACTAAAAA TCGTCGCGAAGATTTAGCGGGGAAAAAATATTTGTTGTTTTTCCCATAAG GAGAAGAAGAAGGGTGGAGAAAGAAGCTGAAACACATGGAAATCCAATCC ATTCCAATCTTGACTTGAGAAGAAGGTGAGCATAAATTTCTTTCTGATTT CCGTCTAGATATTAATCGTCAAAACTTGGAAAAGCTTGCACTCTTCTCAG TGCCCCATTTTTAGCCTTGATGCTAGATGCTAAAAAGAAAACTAGATCAT AATAGATGCTTTTACTCCCTGTTTACCTTTTTGTATGCTCCCCTCCCTTG TCTTGTATCTTTTGTGCGCTTTCTGGGATCCTTTGGTACGTTTTCCTTTT TGTACACTACCCATGGTCCTTTTTGAATGCTTTCAGGGTACCTTTTGTAC GCTCTCCGTTGGTCCTTTTTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTACGCTCCCTGTGTATCTTATTG TACGTTCCAGTGTATCTTATTGTGCAGTTCCCCGTATACATTATTGTACG TACCCCATGTACCTTATTGTACGTTCCCAAGTACCTTATTGTATGTTCCC CGTGTATATACCTTATTGTACGTTCCCTGTAGGTTCCCTGTGTTCCTTAT TGTACTTTTCCCTTGTACCTTATTGTACGTTCCCCTACCAGTATGGATTT CGTGTAACTAACGCCAAAGTTCTTCGGCGTACAACTGAAATGTTTTTGGC GCATTGGCGTAAGGGTACTTACAAAGATTGTTTGATTTTCAGTTGGCGTA AAGTAATAATCCAGCTCGGCGTGAATGACTCCATAATCCAGCATAATCCA TCGATTTTTAGCTTCCATTTGGCTAAATTTGTTTTCACTCGCTTGCGCTC GCGTCAATTTATTATTTATGTAGGCGCATGCGCCTCTTTTCCCATCTTGC ACCCTTATTGAAAAATTCAATGTTGGTACAAAAGAAATTTTGCTTGGCGT GAGGCTTGCTGCACGGAAAAATATCTTCGGCGCGAGATATCCATACAAGT TGTACCTTATTGTACGTTCCCCGTGAACCTTATTTTATGTTCCCGTCTAC CTTATTGTATGTTCCCAGTGTACCTTATTGTACATTCCCANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATGCAATTTTTTAACAAGTTTTTAGACTTATATCATCTGTGAACATGTCT ATGAAATAATGACAATTTTTAGCAGGAATATGGTTATATTTTGTTTTGCA TCGGATATTGCTTAATATAAAGGCTTTAATAAATCTAAGTTACTAAGTTG GGGCTTTAGGATNATCGGATATTGTTTAATATAAAGGCTTTAATAAATCT AAGTTACTAAGTTGAGGCTTTAGGATAATCTGTGGGGTTCGACTGCGACT ACAATCTATGCTCTGAGCTATTGGAGGAAATATTTAACCACATCTTTGTG GCTCTTGTTATTATTANTTCCTATAGGAACATTAACATCGTGGATAACGG CATACTGGAGAAGTGGGACGTGGGACGGTGGGACGCTCAGGTGGGACGCT CGAGTGGCACGCTCAGGTGGGACGCTCAAGTGGGACGGTAGTGGGACGCT AAGGTGGGACGGTAGTGGGACGCTAAAGTGGGACGGTAGTGGGACGTTAA GGTGGGACGGTAGTGGGACGCTAAGGCGGGACGGTAGTGGGACGCTAAGG TGGGACGGTAGTGGGACGCTAAGGTGGGACGGTAGTGGGACGCTAAGGTG GGACGGTAGTGGGACGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTAACATCGAGGATAACATGATCAAAATGATCAATCTAATTATCTCTAT AGTGCAACATTATCTCCTTAATATTTTTCCTATAGGAACATTAACATCGT GGATAACATGATCAAAATGATCGATCTAATTATCTCTTTAATTTAACATT ATCTCTTTAATATTTTACTCATTAGAAACATTAACATCATTGATAACATG ATCAAATAGATGGAAAAATGCAGTGCATTTCCGCAATATTAATTGTTATC TCTATAGTGCAACATTATCTCCTTATTAATTTCCAATCAGGAAAATATTA TGGATAACATGATCAAATGATCAATTTAATTATCTCTTTAGTGCAACATT ATCTCTTTAATATTCTCCTATAGGAACATTAACATCGTGGATAACATGAT CAAAATGATCAATCTAGTTATCTCTATAATAAAATATTATATCTTCAATA CTTCGCACTAGAAACGATCATTATCTCTTTAATATTTTACTCATTAGAAC CATTAACATCATTGATAACATGATCCAATTGACGGAGAAGTGCACTGCAT TTCAATAATATTAATTGTTATCTCTATAATGCAACATTATCTCCTTAATG ATTTCCAATTAGGAAAAACATCGAGGATAACATGCTCAAAATGATAAATC TAATTATTGCTTTAGTGCAACATTATCTGTTTAATATTCTCCTATATAGG AACATTAACATCGTGGATAACATGCCCATAATGATCAATCTAATTATATC TTTAGTGTAGCATTATCTCTTTAATATTTTCCCATAAGGAACATTGACAT CGTGGATAACCTGATCAAAATGATCAACCTAAGTATCTCTTTAGAATTAT CTCCTTAATATTTTTCTCATTAGGAACATTAACATCGTGGATAATATGAT TAAAATGATGGAGAAATACACAGACCATTTGGAGGAGTTGGTAGCAGAAC GAACAAAGCAATTGGAGGACGAGAAAGCCAAAACAGATGAATTGCTCTAC CGAATGTTACCGAGGTTGGTCTTCTTTTTCCCGGGGGGGGGGGGGTCGGG TTCAAAAATAACCATACGTGTGTCCCAAATTTAGGCCTTTGAATTCGGAC CCTTACAGTGCAGGGAAAATTTTGCAATATTTGATGGAAAAATCGACCCT TACGGTGCATTTTGTTGAAAACTTTTGACCATTTTCAGGCAAAATATGGT CAGATTTTCGAAATTTTACAATCTTAGAGTGCACATTTTTTCATCTTTGC TGATTTCGATCCTTACAGTGCACTTTGGGAAGCTTGGAAAATATACCCTC AAGGGCCGCACGTATTACCTTGAGTGCCCCCGAGCTTTTTTCCAAACCCT TCTCTGGATAAGAGTAATGTTATTCCATAAATTAACCTTTCCAGCGTGCA ACATTTTTTGAAAAATCTCACAATTTTGAACTTTTCTTTTGAAACTCAAA ACTTTGAGTGTTAAAGCTTGTAGCTTGAGAGCATCGACCTCTAACGGATG GACGGATAACTCATTGTTTCAAAAACAAAGCGCGGCTTTATCCTTTGTGC AGGGAGCGCGTTGCCGCCAAAAGTTTGAATTTTGGANTTGTGTATCCATT CTCCTATCTAAAGCTAGAGATTGTATTCATAACAAATAAACTCAAAAGAC ATCTGGAAATGGAACATGATGCTTTGCAAAACATATATCTTATACATTTG GTGTGAAAGAACTGCCAAAACACGTCAAATCACTCTGACTCAGGAATCAA CTCTACAGCACACAACCGTGCGTTGAGCTAAAGAAAAGTTATGGATAAAT CCATTGCAGTTGCATACTTCAGATAGCAGAGGGGTGAGTTTGTGTTTATT TCTACCCCATCTTGTACTATGTTACATTCTTTGGTCNGATTCTCAAACGT TTTATTCATCGAGACAAACAAACCGACACTTGCACCTTTGAAAACCCGAC AGGCTCTCATTTTGAAATTGTGGATGTCAGAGCTGGAGCAANCCCCTGTA CTCTGTGGTAGTGCTTTATTACTGCTTTTAGCACCTGTATATCATATTAA TTTTTTAATGAAATTTAAAGTATTTTCCAACTCTATAAAGTACCACAATA ACACTAAAAATAGTGGAAGAGGGAGGCAGATTTCAGGTTGTCAATGGAGG AATTTTAAGCTACTCAAAGTGAACCTGCCTCTGAAAATCACTATTTTTCC GCTATCCTCCATTTGACTATGGAAGTCAAGTCCACTTCATTTGTGTAAAT ACAAGTTAAAACAACTCGTGCAAATAATCTTTTAGTCATCTTATCATTTT ATACACACATATCCTTATAAACTTTTGTTTCTTTTTTCCTACAGACTGAC AGAAAGACGTTGAGGAGTTACGAACTAGAATCATTGGATCCTTGTATGAC GCAATAAGAATCTTAGCCAACAAGGCCACAAATGCTGGATATCAGTTATT ATGATTTCATGATTTTTGTGTGAACAATTGGTGTGTATGATACAAGCTTC TGAAACTGAATAAAACTAAATCAAATTTTTATCAGAAATCTTTCAACGCA AGTCAGTAATATTGCTAGGAAACTATGATAGTACAACACTAACAGATTGA GATGAACTAAAAGATAATATGCTAACTTTAACGATCCATTTATGGACAAT GAATACAAATGTGAAATGACAAGAATATGATACTTGCATTATCGCCCTGC CCTTTGGTTAGACAATCGGGGTCGAATTGCACTAACAGTGAAATGATTTT TCTCATCCTTTGTGAGACTGCTAGATATTTTTCTATTTTTTTATACAATA TATATTGAGATTTATAAATTGTAACATAGAATTTTATTGAAAGGTCCTTC CTTGAATTTCTTAAGCAGATTTGTAACTCTCTAGTTAATTAAACGTACCC AGAGTACTAGGTTTGTGAGGTGACCGGTAAGTCATCTTTTCTCAAAATTG TTGATTTTCGTGATTTTTGGACCCTTACAGAGACTCAATTTTCTTTTAAA GGGTTTTTGTACCCCTTTGAGAGACTTTCGAGGGTGTAAAAAAGGGACCC TTATGGCTCACACATACTCGGCACCCATTTTGCCTAAGTAGCCCCCCCCC CTCGGATGAAACACAGTTGGCCTATCCAGTTTTCAAAATCTGTCAGCTAT TCACATTGTCTGCTAACATACTTTGGGATGATCTCAATTGAAATTTAAAA AAATGTTCTCTTAGTTGACAAAATTGACATGCCCTTGTTATCTTAAATAC TTTGGCTGAAAAATTTCTGAGTTTAAGTTATAAAGTAGTTATGAAGTTTT TACAATTTTAGAAGACCATGATGTTTTCACCTTCTCCACCCTTTTTGTAA TAAGAAATTTAACACCTTGCTGTTATTTCTAGGGAATAACTAGAATTTTT ATTTGTCACTTTAAATTGTCATTATTTTTACTTAGGTTTGTTGTGCCAGT TGACCTTTGTCCTGGTAAATATATTTCATACATAATAAAAAAATTATGGA TTGTTTCTAAGTGAAAACCATGAAATCTGAGCTTATTTCTCAACAGGTTT GATAAGAGGCTTCCTATCTTATGCTTATACCTTTAAATCAATTTTGAACT GAAGTAACATTTCTTCATTTATTCAAAGCCTAGATTTTGGAGCTTATATC ATAATACAAGTTTATGATAGTACCAAATTTTGGGTAAACAAAAAGGTTTT AAATGCATGAAAGTTGGAATTAATATCCTTTTTATTAAATTATTAACAAT TTTAGCTTAGGTTCAAAAATGGATGTTATTTAGCATGTATAGTATTGTGC TGCCCAGGTATAATTTCGAAGTTTTGATTGAATAGAAATAGAATCTACTG AAAAATTAGAGAAATGTTAATCGAACTCGTCTTGCTTTATAAAGTAACAT TACCCAAAAATATTCAAAGGGATTGTCGCCATTCTGAGAAGACGACATTG ATTGGTCTTTAAAAAAATAAGATGATACACATGATTCAAGTCATACATGA AGCTGTAATTTATTGTCAGTTACAATTAAGTCTCACCGTGAGATCGGGTA ACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAATGACCTGG CTGGTCATTAAAATACAAAGTTAAATCAAAACAAAAATGGTAGTAGAGTA CAGCTGTGAGCGGAGCTGCTTAGTTTATTTTTGTTCTGAAATTTTGCTGC TTTGATTGGTCAGTCATTTGATGGCTATGCAAGTTTTCCTCCAATGATGC AAGTTACCCAACTTCACGGTATATCAAATCATACAATTTACAATTACACG TGAAGAAAAATTTCAATTTCAAAACATGAATTCAGGGTCAATTTGGAATA AGATGCAAACAATTTAAATGAACTTTTCTTTAAAAAACAACAACTTTAAA TCAAGAAATANACAATTTAAATGAACTTTTCTTAAAAAAAAAACTTTATT AGATCAAGAAATAATGGAAACATTTTTCAGTCCAAATTATAATATACCAT AGTAGAAAAAATAATAATACCTTCAATTTTAAAAATAATACAATACAAAG CAATTTTCAGCCACTTGAAATAATTTGAACTTTTAATTAACTTAATTTCT TTTTAGTAAGATAAAAACACAGCTAGACAGCTAGAATTATATATTCAACA GTATTCAAGGATTTGAAGATACCAGATGGCAACAACTTATGACTTAAAAG CTAGTGACTGTAAAGAACAAAGAATGCACATTTATGAATTTCTGCCCCTT TTGTTGTGGAACTATAATGAGTGTTTCTATCTATCAGCAAACAAATATAG TACCAAAAGCCTGATGATGATTTTCATTTTTATTGTGCATATTATCGGTG TTTTTTTTCTCGAGCAATGTCGGTCAAGCAGTTCATAACTGTGTGTTTTA CTAGGATCATCAACCACACTAACATGGTAACCAAACTCAATTTTGTCGTT GTCTATATATACAGGTGGAAAATGGAGTTGCACGTTAAATTCAGTTTATT GCCAATTACGTTTTATTTGAAATCCAACATGATAATTTTTCTTCTTGTAT GACAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT GTATGGACACGTGTAAACAGGATGGACACCTCTGTGTGCTGTGAGGATGA AGAACCTGAAAATGAAGACAAAATTTTATGAGTGAAAGTGTACTGTTAGT AGAAGCTGTGATATTATAGATGGAATTCCTGATTTGTTGAAGTTTCATAT ATGAAGCACTACAACTGTATTGTGCACTCTTTGGATGTTTGCTACGCATT ATTCATTGAAGTTTCACATATATAATAGTATTTATCTCAATATGAGATAG AAGGAACCCCACCTTCACAAATCAAATGTATATAAACATTCAGACATCAA ATGTCCCTTCAGATGTTTAGATACTGGAGTGACGATCTGTATTTTACATT TATATCATTAAGTTTATGATACAAAATATGCTAATAGTCTACTGTAGATT ATCCAAGTTAATTTTATAAGAAAGAACACACATCAGACGAAAAATAAACA AAACATCTATCTACCTTTCATAATTGTATTAGAAAATGGGTTTGAAGATG ATCATGGCACTCTCTTTTACTGGAACAAAATTTGATGATAAAGCTTGAAA ATTCATTGACAATTCCATACAATTTTCAGCTTCTTTCCTTCATGAGCTCC CTTCCCTGTTTCCTTCATTTTCAAGTTGTTTTTTATTTTTCTACCCGACA TCCAGGAGAATTACATCAACTGGGTTATCGAGACCTCGAATTTTTCTGAT GCAATGATCACGTGATCATTCTATTGATTCGGGAACAATAAAACCAACGC GCTTGAAAACAATGAGTTATCCGTCCATCCGTTAGAGGTCAAGAGCAGCC ACCGGCTAGGAAGTATGAAATATCTGTTCTTGAGGTCCCTATCTCCTGGA AAAAACTATCTGTTCTGTATCCTGGGCTCTCCTGGATTACATCATCTGTT CTGCGAAAAAATGGGACTCCTGGAAAATGTATATCTGTTCTCTAGAAATA TTATGCTCCTGGAAAAATATAACAGCTATTCTCTGAGAAAGTTAAAATGC TCCTAGAAAATGAGACCTTTTAAGAAAATTATGAAGCTCCCTGGAAAAAA AATCTGACATCTGGTTGTGTTTTTCACAATTTAGCTCCTGGATTTTTTGA ACAGATTGTCCGCTGGAAAATTGTATGTGTTTTTCCTTAAAATGTGCTCC TGGATTTTAAGAACAGATATCTTTAAGGCGACCCCTGGATTTTACCTGGG TGTTTTGAGGAAAGTCTCTCCTAGATTTATCCACAAAATTTACTCTCCTG GAAAAAAAGAACAGATATTTCAAAAAAATCTGCCGGCGGCTGCTCTTGAG AGGTCGATGTTGAGAGTTAGACAATGGTTTTTGTACCATTGAAAAGGTAT TTTTATATTCTTTCTAAAAGCATTCAGTTTATGCCATTTTAAATCAAGTG GTCAGGAGCTATGGCCTTAAGTCTGAGACTTGGTATATGAGCTCATTTTG GACGTTCATGTACGTCATTCGGGTCTGAAAGGGTTAAGGATTTTGATGAT GAAAAACGTGTCACAAAATAATACGATTTTGCTGAAAATGTCTTGTCTTA AAGTCATTTAAAAGCTTTGAAAGCGGGCCTGAGTTGTCTTTCCACTCCTT TGAGAAAATATATCAAAATCCATCCTCTTGATTGAAATGATTGAACTCAT ACTATTTGAAATAATGTTTTAAAAGCCTGTTACAAATAGTCACAAAATTC TCAATATCACAAAATTCGCCTTAGGGGGTATTTGCGTAAATGCGTAAATT CAAAAAAATTGCGTGAACTAAATCTAATTTTTGAACGGTGTTCATATAAT GCGTGACATTATCCTATCCCCAAATTTGATAAAAATCTTTCTCGATTTTT CCGAAAGTATTTCCAATATTTTTCTTAAAATCGTGTTAGTATGAATTTCT ATAAATGTGTGAACTTTAACTCTGGCCCCTTTTTACATACACAGGCTGCA GAATTAAAGTCTAAAGACAAATCACGCTTTTACTCGAAACTTTTATGTGC TTGGTACATGACATTTATTTCTGATTGGTTCGAATTTATTAACACTAATA AAATTATCAGCTGTAAGTTATCAAGCAAGTAACACGATAATAAAATCACG TGAGCTTTGTCGAGTAATCACATGTTTTGACTGCACTGATACAATTTTTG CAGCCCGTGTGACCTTCATATGTTTCACTTATAGAACAGTAGCAGAACAG CTGAAACATGGAGAAGCAGTGAGCGCTGAGACATTTGATATGGTGACAAT CTTTTTCAGTGATATTGTTGGGTTCACCAAACTGGCTGCCGAATCCACTC CAATGCAGGTAGGTACGATTTAATGGTTAAAATGTTGCTATAGCAGACCC TTGCAAATTGCCCTGGGCAAAATTCTTGATAAGATCTTGGAAGAACTTTC TTTCTTTCTGGCAAGGTTCTTGGAAGATTTAATATGATCTTGTCTTGTAA AGTCTTGCCTTTTCGTTTATAATCTTGGAAAAGATTCTATATTATCCAAG ATCTTGGATTTTTTTGGCGAGATCTTGGTGAGATTTTCTAAGATCTTGTC TCGTAAAGTCTTGCTTTTTCGTTTTTCTTGGAAAATGTTCTTGTAATATC TTGTATGATTCTATATTATCCAAGATCTTGGATTTTTTTGGCGAGATCTT GGTAAGATTTTCTAAGATCTTGTCTTGTAAAGTCTTGCTTTTTCGTTTAT GATCTTGGAAAATGTTCTTGTAAAATCTTCTAAGATCCTATATTATCCAA GATATTGGATTTTCTTAGCAAGATCTTGTACCAGCAACCCATAACGAATC ACCGCAAATGTCCAGTTTCGTTCATAGGAAGTTTAAAGACTCAGTTTTAT TTAACAGATTATGATATTACAGTGGCGTCCCAGCTGACACACAACGTTGT TTCAACGTTAATATAACGTTATATGGACATTGTGAACATTAGATAAACGT TGAAACAACGTTGTGTGCCAGCTGGTGTATCCCGAGAGGGGCGCATAATT TGTGTAGGAGAGAAGATTTTTATGATACTGTAATTATCTATGAATACCAT GAATATGTAATTACAGATGTAATTAAAAATTTGACTCTCCTATACAAATT TTGCGCCCCTCTTGGCTACGCTAATGAAAGGGAATTAAAAAGAAACGGAC TGCAAAAATGGTGTGGGTGTGGGTCATCTTTGCCTAGACTTTGTCATATA GTCTTTACTGCATCTTGATTGTTCTGACCTATATTTTTCATCATTTTACA GGTTGTTGATTTGTTGAACGATTTATACACGTGTTTTGATCAGATCGTCG ACCAACATCATGTTTATAAGGTAAACGATCTGCTTCCAAATATACCTTAT CGGCCAAAACTTAGTCGGCCCTAAGTGACTAAATTTTGGCTTGGTGACTA AAATTAGGGCCAACTAAAAATATGGGCCGACTAAAATTAAGGGCGACTAA AAATTTGGGCCAAATTAAAAGTTTATGATTAAGCTTTCCTTATTTTCCAG TATTTTAAGCTTTCTCCTATTTTTCAACTGCTTGTAAATTTGGAAATGAT CCAAATTTTTAGTCGGTCTTTATTATTAGTCAGCCCTTAGTGACTAAATT TTGACAAGGTGACTAAAATTAGGGCCGGCTAATAAAAATTAAGCCGACCA AAATTAAGGTCGACTAAGTTTTGGCCGATAAGATATTGAAAATTTTGATT ATTTCCATGTTTTGCAAAATTTGAAGTTTGGGTGAGAAAGACGCTTTTCG CCAACATCATGTTTATAAGGTAAATGAACTGACGCTCTTTGTTAAAATAT AACATAAAAAAGATATACGGAAGGCTAAAATCGTTAGCGATAATCAACAC GCTTCAGAGAAAGGGTTCAGACACGGCTATTATTATACGTAATTTGATTG CACGGCTTCAGCAGAGATCATGGATGATTGCCATGGTTACTTTTGTTCAC GCTGCAAGTGCGCGTTGAATGAAATCGAGATCTGTCGTCACATGCTTATT TGTAATATTCATACGCTGTGCTATTCACGGTAACAAAAAGATGTTTAATT CATGATATGCACCATTACAATTTCTTCTGACATTACATCACAGACCCAGC AGGCAACAGCTGATTGGTTGTAAATGACGTAAAATTAGTCAATACGTCAT TCGTAAGCAATCAGCTGTTGGGTCCGTGATGTAAAAATGTTAGAAGACAT TGCAATGGTGAATATCATTAATAAAAGTAGAGCAAATGTTTAACCATAGT CATTATAAAAGACCCTGGTCTGGCAATGTATTGTTTTAGAAGTATTATTA ATTTTAAGTTTGCAAAATAAATCGAGTTTGTTACGTAAGCTCTATCTTTT AACGATAAAAAGAGACAAAAGCCTTCCAGACCAGTGTTTTTACAATGACT ATGGTTTTACAGGATTGTTCAAAATAGATTTCTAAAGCAGCAAGTTTTCC TTCCAGAAGATTATCATTTTTAAGAAACCAATAACTCTCTCTTGAAATTT ACAGGTAGAAACAATTGGAGACGCATACATGGTGGTGAGCGGTCTCCCCG AACGAAATGGAAATCGACACGCAGGTGAAATCGCACGCATGTCTCTCGAC CTGTTGAGTGCAACAACCACTTTCGTTGTGAGACATAAGAAAGAGTATCG CATACAGCTAAGGATTGGCATTCACTCAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021207XLOC_021207Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036071-exon-sc0001410-1575043694:48896..48984TCONS_00036071-exon-sc0001410-1575043694:48896..48984Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:47393..47539TCONS_00036071-exon-sc0001410-1575043694:47393..47539Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:45840..46014TCONS_00036071-exon-sc0001410-1575043694:45840..46014Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:36571..36711TCONS_00036071-exon-sc0001410-1575043694:36571..36711Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:29977..30100TCONS_00036071-exon-sc0001410-1575043694:29977..30100Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:28965..29033TCONS_00036071-exon-sc0001410-1575043694:28965..29033Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1575043694:27604..27780TCONS_00036071-exon-sc0001410-1575043694:27604..27780Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:48896..48984TCONS_00036071-exon-sc0001410-1510915933:48896..48984Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:47393..47539TCONS_00036071-exon-sc0001410-1510915933:47393..47539Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:45840..46014TCONS_00036071-exon-sc0001410-1510915933:45840..46014Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:36571..36711TCONS_00036071-exon-sc0001410-1510915933:36571..36711Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:29977..30100TCONS_00036071-exon-sc0001410-1510915933:29977..30100Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:28965..29033TCONS_00036071-exon-sc0001410-1510915933:28965..29033Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1510915933:27604..27780TCONS_00036071-exon-sc0001410-1510915933:27604..27780Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:48896..48984TCONS_00036071-exon-sc0001410-1491911889:48896..48984Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:47393..47539TCONS_00036071-exon-sc0001410-1491911889:47393..47539Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:45840..46014TCONS_00036071-exon-sc0001410-1491911889:45840..46014Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:36571..36711TCONS_00036071-exon-sc0001410-1491911889:36571..36711Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:29977..30100TCONS_00036071-exon-sc0001410-1491911889:29977..30100Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:28965..29033TCONS_00036071-exon-sc0001410-1491911889:28965..29033Clytia hemisphaericaexon
TCONS_00036071-exon-sc0001410-1491911889:27604..27780TCONS_00036071-exon-sc0001410-1491911889:27604..27780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001410supercontigsc0001410:27604..48984 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.87648 1.14754e-05 3.66285 2.9893 9.80978 5.89551 15.6248 15.4246 7.24279 8.82205 5.76652 7.53846 2.61928 2.73088 0.351318 0.22854 1.90368 0.501114 9.59936 12.1768 2.74534 2.02293 4.91198 4.77232 2.75232 2.86864 1.97889 2.65004 2.9443 3.25493
Blast
BLAST of TCONS_00036071 vs. Swiss-Prot (Human)
Match: GUC2F (Retinal guanylyl cyclase 2 OS=Homo sapiens GN=GUCY2F PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 8.779e-95
Identity = 154/277 (55.60%), Postives = 200/277 (72.20%), Query Frame = 2
Query:   98 WTAPEHLDNIKEER--SKEGDVYSYGIILQEIITRGSPYSMYENLSAKEILDRVKKCSNPRFRPVVPEDYGHPEYHDLMSQCWEEAPTSRPRFDEIMKALKKLNGGKNINIVDNMIKMMEKYTDHLEELVAERTKQLEDEKAKTDELLYRMLPRTVAEQLKHGEAVSAETFDMVTIFFSDIVGFTKLAAESTPMQVVDLLNDLYTCFDQIVDQHHVYKVETIGDAYMVVSGLPERNGNRHAGEIARMSLDLLSATTTFVVRHKKEYRIQLRIGIHSG 922
            WTAPE L   +  R  S  GDVYS+ II+QE++ RG+P+ M + L A+EI++R+KK        V PE +  PE   LM QCW EA   RP FDEI    K  N GK  NI+D+M++M+E+Y+ +LE+L+ ERT++LE EK KT++LL +MLP +VAE LK G  V  E FD+VT++FSDIVGFT ++A S P++VVDLLNDLYT FD I+  H VYKVETIGDAYMV SGLP+RNG+RHA EIA MSLD+LS+  TF +RH  E  +++RIG+HSG
Sbjct:  712 WTAPELLRAPRGSRLGSFAGDVYSFAIIMQEVMVRGTPFCMMD-LPAQEIINRLKKPPPVYRPVVPPE-HAPPECLQLMKQCWAEAAEQRPTFDEIFNQFKTFNKGKKTNIIDSMLRMLEQYSSNLEDLIRERTEELEIEKQKTEKLLTQMLPPSVAESLKKGCTVEPEGFDLVTLYFSDIVGFTTISAMSEPIEVVDLLNDLYTLFDAIIGSHDVYKVETIGDAYMVASGLPKRNGSRHAAEIANMSLDILSSVGTFKMRHMPEVPVRIRIGLHSG 986          
The following BLAST results are available for this feature:
BLAST of TCONS_00036071 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GUC2F8.779e-9555.60Retinal guanylyl cyclase 2 OS=Homo sapiens GN=GUCY... [more]
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