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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036055 ID=TCONS_00036055|Name=TCONS_00036055|organism=Clytia hemisphaerica|type=transcript|length=893bp
CCCGACTGGTAAAATgcggtaaaaatggtagacgtTTACAGCGACATAAA
CGTGGCAAGAATCGAAGATGTCGATGTGCTTGCTTTGCTTTGATTTGGTC
GAAGGAAACTGGATTTTCTTAGTCAGAAAGAAAGTAcaagactttatttt
tatgtgatagcctttttttggaaagtaGGCTTCTGTTTGAGTACCAAATG
TTCTAATTTTTGCAAACAAAGNTGTGAtagcctttttttggaaagtaGGC
TTCTGTTTGAGTACCAAATGTTCTACTTTTTGCAAACAAAGACCATACAA
AAAGCTTTAATGATGTGGCTGAATAGTTGAGAGAATTGGGTATCACATTG
TATCAGAAGATATTAGCACATAAAAGAAAGACCTTACATACCATATCTCG
AAAGTATTGCCGTTTACTCCTGCTGTAAATGTCATACCGGAACGACTTGA
GTTTTCAAGTTGCCAGATCCACCACCCAATTTCATCAGGTTTGACTTGTG
CTGCACGATTCGAACCATGAAAATTTATATGGACCTTCATTTTAATATGT
ATTAACAGCATTTGAAGTTTGGAATAGAACGTAGAAGTATTTTTTACACT
GCGGCTGGAaaactttataatttttgtcttatcggaagaaaatttcttgt
ttacgcataactttttttctacttgtAATTACATCATGAAAATATATATG
CAGCTTCATTTTGATAAGTACTagctattttttaaatttgaagtgGAACG
TTTAAGTATTTTTTGCATAGCGGACcgtaaacttttcaatttttgtcgTT
TCGCAAGAAAATTTCTGGTTTAcgcataactttttttctacttgtAATTA
CATCATGAAAATATATATGCAGCTTCATTTTGATAAGTACTAG Run BLAST on NCBI transcript from alignment at sc0001408:79250..81688- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036055 ID=TCONS_00036055|Name=TCONS_00036055|organism=Clytia hemisphaerica|type=transcript|length=2439bp|location=Sequence derived from alignment at sc0001408:79250..81688- (Clytia hemisphaerica)
CCCGACTGGTAAAATGCGGTAAAAATGGTAGACGTTTACAGCGACATAAA
CGTGGCAAGAATCGGATACCACCGTGGACCGGCCATGTGGGTCCCGGCAG
ACGTTCCCGGGAGTTCCATTGATGTCAACTGGCTAGGGGGGATGTGAAGG
TAGTCACCTGAACCGGTTGGGGTGCTTCAAAATTCCTCAAAGTGTCGTGA
GAACCCAGCAAAAATGATTAAAAATGACCTCCCTCGGGTACCCACCCCGG
TTAGACCAAGTTTGGCCTCTACAGGCCTCAACAGCCTATCACAGCCCTTC
GCATCTTTTTGGATGCCCTCTGCCTTGCTCTCCCTCGTGGCCAGCAACCT
CCATCAGTCATCCGAAGCCTTCAAAAGGCCTCAAAAGGCTTGAATATTTG
CGAAAATTCGTCAAAATTGGATAAAAACGATACCGCCGTGCACGGCCCCT
GGGGGTCCCGGCCGGGTGTCCGAGGAGTCCGGTCGGTGCGCACCGGTCAG
AGGGGATGTCAGGGTACACACCTGCACCATTGGGGGTCCTTCAAAGTTCC
TCAAAGTATCGTCAAAAGCCGGCAAAATTGTTCTGGCTCGCTCCGTGGAC
CGATTTCGGGGCCTCCCGTACACCGAACGGGGGTCCTCGAACGGTCCCCC
GAACCTGGGCCGAAAAGGGTGGCAGACATGCTTTGCATATCGACCGGTTT
GGATGTCTGGGAGGTCCCGGGGGTCTCGCTATAAAGGGATTTCCGCATGC
CCAAAAATCGCCATTTTGACCCGCTGGACGGCCCTGTCCGGGTCAGGACC
GGGCCACCGGGGGTCGTACGGCTCGGGACTGATGCCCTGCGTCCATCCCA
GCCCATCAGAACATTAAGGAAGGCCTTCCAACTTCAGGCGTGCCTTTAAA
ACCGGAGATTTAGAAAGTTGACATTGACGGTTTCCCGGATTCGTTCCGGA
CTTTTGCCGGGCCTTCGGAAGGCCCAGATTGGCTGGAATGGTCGAAAGCA
CCCTTGTGCTTTGCTCTCAGACCGTTTTCAACATTAAGGAAGGCTTACAG
GACTTTTGGGGGCCTCCAGACCGAGCTATGGTTACGGTACTCTTAAAAAG
GGCATTTCCGGACTTTCCTGAGCCGGGAAAAGCCGTTATAATGCCCCAAA
CGACCCAAATCGCCGGTCTTTATGCCCGGACATCTTTTTCACTTTTCGAG
TTCATTATAACAAGCCTTGGGGGCCTTGCAGGAGCCCCCAAAGCTTGCAG
AAAGTCGCGAGTTCCGGAGGCTTGCCGGGGAGTTCCGGAGGGTTCTGAAA
AGTCCGAAACACCCGGAAGGGGTCGGGCCACACCCAAGAAAGGTGTGGTC
CAAATATGAAGCATAACGGACTAGTGGTTGGTGAACTACGGTCGATAGAC
CGTCCGGCTACTCTGGCTCTGCGATGTAGCCGCGGACATTTATCTTGTGA
AAGTATCTAGGTTAGTTAGTGCTCAATACTAGGCTAGAATAAATCCAGTC
GGGTTGAACTAATTTTCCGTAAGGAAAATATACATAGCATGCTGAGTCCG
ACTGGTATAATGCGGTAAAAATGGTAGACGTTTACAGCGACATAAACGTG
GCAAGAATCGAAGATGTCGATGTGCTTGCTTTGCTTTGATTTGGTCGAAG
GAAACTGGATTTTCTTAGTCAGAAAGAAAGTACAAGACTTTATTTTTATG
TGATAGCCTTTTTTTGGAAAGTAGGCTTCTGTTTGAGTACCAAATGTTCT
AATTTTTGCAAACAAAGNTGTGATAGCCTTTTTTTGGAAAGTAGGCTTCT
GTTTGAGTACCAAATGTTCTACTTTTTGCAAACAAAGACCATACAAAAAG
CTTTAATGATGTGGCTGAATAGTTGAGAGAATTGGGTATCACATTGTATC
AGAAGATATTAGCACATAAAAGAAAGACCTTACATACCATATCTCGAAAG
TATTGCCGTTTACTCCTGCTGTAAATGTCATACCGGAACGACTTGAGTTT
TCAAGTTGCCAGATCCACCACCCAATTTCATCAGGTTTGACTTGTGCTGC
ACGATTCGAACCATGAAAATTTATATGGACCTTCATTTTAATATGTATTA
ACAGCATTTGAAGTTTGGAATAGAACGTAGAAGTATTTTTTACACTGCGG
CTGGAAAACTTTATAATTTTTGTCTTATCGGAAGAAAATTTCTTGTTTAC
GCATAACTTTTTTTCTACTTGTAATTACATCATGAAAATATATATGCAGC
TTCATTTTGATAAGTACTAGCTATTTTTTAAATTTGAAGTGGAACGTTTA
AGTATTTTTTGCATAGCGGACCGTAAACTTTTCAATTTTTGTCGTTTCGC
AAGAAAATTTCTGGTTTACGCATAACTTTTTTTCTACTTGTAATTACATC
ATGAAAATATATATGCAGCTTCATTTTGATAAGTACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036055-exon-sc0001408-1575043694:81644..81688 | TCONS_00036055-exon-sc0001408-1575043694:81644..81688 | Clytia hemisphaerica | exon |
| TCONS_00036055-exon-sc0001408-1575043694:79250..80097 | TCONS_00036055-exon-sc0001408-1575043694:79250..80097 | Clytia hemisphaerica | exon |
| TCONS_00036055-exon-sc0001408-1510915933:81644..81688 | TCONS_00036055-exon-sc0001408-1510915933:81644..81688 | Clytia hemisphaerica | exon |
| TCONS_00036055-exon-sc0001408-1510915933:79250..80097 | TCONS_00036055-exon-sc0001408-1510915933:79250..80097 | Clytia hemisphaerica | exon |
| TCONS_00036055-exon-sc0001408-1491911889:81644..81688 | TCONS_00036055-exon-sc0001408-1491911889:81644..81688 | Clytia hemisphaerica | exon |
| TCONS_00036055-exon-sc0001408-1491911889:79250..80097 | TCONS_00036055-exon-sc0001408-1491911889:79250..80097 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001408 | supercontig | sc0001408:79250..81688 - |
Blast
The following BLAST results are available for this feature:
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