TCONS_00036039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036039
Unique NameTCONS_00036039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length694

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036039 ID=TCONS_00036039|Name=TCONS_00036039|organism=Clytia hemisphaerica|type=transcript|length=694bp
AGATAGAAGCGCCCAAGTCACATATTATAAAAAACAATTAGAACTTCTCG
AACAAGAAGAACAGCGTGTTTTGAGCGAGATCAATAATGAGGAGAACCTC
TTGCTGCAACAGATAGAGCAAAAGAAACGTGAGATCGACCTTCTGAAAGC
TCGCAGGCTCCAATCCCAATCGATCCAATCAACGAACTCTTCTGTCTCCG
CCTCCCGTCATCAACCCGCCCCCACCCCAACGTCTCAAGCTACAACAAAC
GCCGCCATCTTACCTTCGCTGTTCGATGACGATCGCCCTGTACGCCCACA
AGTTTTGCAAAGTGgatctttattagaaaactctaGAGGTCATCTTTCTG
ACCCCCTTGCCTTGGCTGTAAATAATGTTCGTGGTGGAAATGGTAATGTT
GGTGGAATTGATAGCACTGAAATCTTTCTTCGACCATCTCGTCTGTCCAA
CGATGGGACTCGTGGTTCTGTATCGTCCAATGGTGCAGAAATATGACATG
TCCATTCAAAAGACTCAAGTGGAGAATAGACGGACCAGTAGTATACCAAc
cttgaaatttttgattttcaacctTTGGCCCTTTCCGTGGTGACGTCTAA
ATATGATGCCAGCAAGGGAAAACCAAAAGAAGTCTGGAAGCTTATTCACC
GAATCCTCCACCCAaagaaaagtgttatcaatATTCAACCCTCC
Run BLAST on NCBI

protein sequence of TCONS_00036039-protein

>TCONS_00036039-protein ID=TCONS_00036039-protein|Name=TCONS_00036039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
DRSAQVTYYKKQLELLEQEEQRVLSEINNEENLLLQQIEQKKREIDLLKA
RRLQSQSIQSTNSSVSASRHQPAPTPTSQATTNAAILPSLFDDDRPVRPQ
VLQSGSLLENSRGHLSDPLALAVNNVRGGNGNVGGIDSTEIFLRPSRLSN
DGTRGSVSSNGAEI
Run BLAST on NCBI

transcript from alignment at sc0001406:6805..20750-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036039 ID=TCONS_00036039|Name=TCONS_00036039|organism=Clytia hemisphaerica|type=transcript|length=13946bp|location=Sequence derived from alignment at sc0001406:6805..20750- (Clytia hemisphaerica)
AGATAGAAGCGCCCAAGTCACATATTATAAAAAACAATTAGAACTTCTCG AACAAGAAGAACAGCGTGTTTTGAGCGAGATCAATAATGAGGAGAACCTC TTGCTGCAACAGATAGAGCAAAAGAAACGTGAGATCGACCTTCTGAAAGC TCGCAGGCTCCAATCCCAATCGATCCAATCAACGAACTCTTCTGTCTCCG CCTCCCGTCATCAACCCGCCCCCACCCCAACGTCTCAAGCTACAACAAAC GCCGCCATCTTACCTTCGCTGTTCGATGACGATCGCCCTGTACGCCCACA AGTTTTGCAAAGTGGATCTTTATTAGAAAACTCTAGAGGTCATCTTTCTG ACCCCCTTGCCTTGGCTGTAAATAATGTTCGTGGTGGAAATGGTAATGTT GGTGGAATTGATAGCACTGAAATCTTTCTTCGACCATCTCGTCTGTCCAA CGATGGGACTCGTGGTAAGCCATTACGAATAGTTGACTTTGTTTCAAGGG CTCGTCCCACGGAAGAGGAAAAGGTCCTCTCCTATGATAGAAACTGTAAA CTCTCATTCATCTTAAATGATTCAAAACCGAAGCTCAAAAACATTACTGT TGAACAATTTAGCATAGCAAATCTTCGAATTTTTTATGAACTATTATTTT CTAAAAAACTGAGCACCATGCAAGAAGTCCGGGAGTATCTCTCGTACTCT GTTAAGATCTTAGAATTGGCGACTAAGTATTCCTGGGAGTCTGTGCTGCT GTACGATGATGAATATCGCATATTACAGCACACATATGGCTTTTCCTGGG CCACTGATAACAGTCACCTACATGAGGTAATGCTTTTACCAAAATGGGCA AGCGCGCTTAAGGGACAAGACAAGTTCTCCGGCTCTTCCTTACCTTTTCT TGGGTCAGGTAAGACTGGGGGCTCTCGGACTACTACTGTCTCACATCTTC CCAGTGGTGAAGAGATCTGTAGGATGTTCAACTCTCGTAAGGGATGTCAA CGTCCCCAATGCAAGTTTTCCCACGCTTGCAACCGTAAAGTTGGTTCGCA AGCCTGTGGGAACAGACAACATGCTGGATGTAATCACCCGTCACGTGGTG ATAACTCCAAAGATGGGGATGAATGACAACCCTCACCTCCTCTTTCAAAC CTATCTTCGTTTGTTTGGGAGAGGGAGCTTGAAGGGGATCCTGACAAGGA TTTCATTCTTGACGGGGTCACCAACGGTTTTAAGCTCCTGCCCCTTGATG CTCCCATCTCGATTGCCGAGGTGGACAACTACACATCTGCTGTCAGCCCA GGTGCCAAAGAGAAGGTTGAAGCCACCATTCTCGAGGAACTAGCGGCTGG AAATTATCGCATTGCTAATTGCAAACCTACCATTGTCAGTGCACTTGGAG CCGTTCCAAAGCCAGACTCTGAGGATTTGCGCATAATCCACGATTGCTCC ATGCCTCCGGGGCGTGGGGTAAACTCTTTCATTGACATTGAAAAACAAAA GTTCCAGACCCTAGATGATGCTACTAAACTGATAGGGAAGGACTTTTACA TTGCTAAGGTGGACCTTCGCAGGGCCTATCGCTCTGTTCCCGTCCACCCT GGAAACTACTCAGCACTAGGTTTGAAGTGGCGGTTCAAGGATGACCGACA TTCCACCTACCTAATAGACACACGTCTTCCGTTTGGAGCTCGCAGTGCTC CTGGTATTTTTCATCGTATCACACAGTCTGTTAAGCGCATGATGGCCAAG AAAGGATTCTCTAAACTGGTTGTTTACTTGGATGACTTTCTTGTAGTTGG CCGTACATTCAAAGAATGTCAGCGAGCATTTGACACCCTCTGTGCCCTCT TACTTGAACTGGGTTTCATGATAAGCCCAAGCAAGTTGGTCCAACCCTGC CAGAAACTTACCTTTTTAGGTGTGGACATTGACACACAGTCCTTGTCCCT TTCTTTGTCTCAAAGGAAGCTCAGGGATCTCAAGGACCTGCTATTCTCTT TTCAAACTAGAGTGCGAGCGTCCAAGAGACAGCTTCAACAATTAGCGGGT CGCCTTAACTGGGCCTGCAAGGTGGTTCATGGCGGTAGAACCTTTCTTCG GAGGATCCTTGATCTCATGTCCCCCCTTGCCTCCCAGTCTGCTAAGTGCT TGCTCTCAGAGGAGTTTTTCAAAGACCTAGATTGGTGGGTTAGTTTTTTG GAAGTTTTCAATGGGTTTTGTTCATTCCATGACTCACGCCCTGTTACTAA CCTCCACACAGATGCATGCACCTGGGGAATCGGTGCATCCTTTGGAGAGG ATTGGTTCTATTCTAATCTTCTGGTGGATGCTCCTGAACTGTCAGGTCTT CATATCACGTACAAGGAAGCTTTATGTGTAGTTTTTTCTGCGGAGCGTTG GGCGGAATCATTCAAGAATAAGGTAGTCCACGTTTACTGTGACAACCAAG CGGCTGTTGCTATGCTAAACAAGGGTACCACAAAAAATCCGGTTATGATG ACTTACCTGAGACGTCTCTTTTGGTGTTCTGCCATGTACAATTTCCGTCT TCGGGCATTTCATATTCCGGGAAAATTGAATGTTCTGGCAGATCATATCT CTCGTCTTCACTTCCGTCCTAACATGCAAGCTTTTTGTCACCATCTGCTT GCCTCCGGGGGGATGCCAGCCCTTGTAGCCCCTGCCACGCTACACATGTC TCCCTTGTCATACTTCTTTCTGCTGGGTCTTTACTCCTCTAGCCTCTGTT TTTCTTCTGCCTTTTAGGTCGAGCACTGTCCTCCTCTCTCTTGGCAGACG TCCTATTCTACAGACAGGCCACCTATGCTCCCAACACTGTGAAGGCCTAC CGTACTCACCGCAATACATACTTCCGTTTTTGCAGCCTACTGGGCATTGA GCCAGCACCTATTTCTACTGTTCACCTCTGTATGTATGCTGCATACCTAG CTAGATTTCTTTTGCCGCAATCTGTTTGTATATATATTAATTTTGTGGGT ATTTTTCACAGGGACCAGGGCCTCCCTAACCCACTGACGGATAACTGGAC CCTCTCCACTGTCCTGAAGGGTATCAAGCGCACCTTAGGCTCCCCTCCTC TCCCAAGGCTCCCTATGACCACAGACATCCTGCTTCGTATCCGTGGTCTC CTCAATCTCATGGATAGTAAGCATGCGTCGTTTTGGGCAGTCTGCTTGGT CTCTTTTTTTGGGTTTTTCCGTGAGAGCCATCTCCTGCCTTCTTCTGTGT CAGAGTTCTCCCCCTTGACCTACCTCACTCGTTCAGACTTTAGCTTTTCT GGGTCTTCAATTCTGATCAGGGTCAGGTGGAGTAAGACGATCCAGTTTGG TCAACGTATGTTACCATTCCACTGGTTGCAAGCTCTTCTCCCCTGTGTCC AGTTTGGGCCGTGTCCCGTGCGTTCTCTCTCACTCCTCATACTCGTCCCA ATGACCAGGCCTTTTGCTGGAGGGATTCTTCTCGTGTCACTTACCGGATC TTCACGTATAAGGAGTTCATGCATTCACTGCAGTTCTTCCTCACTCGTTT AGGTCTCAATTCCGCTCAGTATGGTTCCCATTCCTTCAGAAGGGGTGGTG CTTCCCTTGCCCTTGAAGCTGGCGTCCCGCTGGACACTATAGCTGTCATG GGTGACTGGAAGTCTGACGCTATTTACCTTTACCTGCACATGCCTTTGTC CCAGCGCTTGCGTGCCCAACATTCCATCACTTCCTTTCTTGAGTGCTAGT CCTAGTCTTTCACTGTGCCCCACCTATATATAGCTTTTCCTAATATATAT ATTTTTTTTTCCCACTACATTCTCACATTGGGTTTGGACCTATCTCTTTT TGTATATTTTTGTCCTAGCCCATGCTAGTCTATTCAGAAGAACTGTGATT GTACCAATGACAGGTACCCTGTGTCCTTTTCTTACTCTATGTGTTTAATG GCCTGATATATGTGGTATATCAGGTTTTAGATTCATAGTGTTATGTTTTT ATCTGTACTCTTCATTCAGCCTCTGTTTTATGTAGCCTCACTCTCATGAG TATTTAAAGAGCACATGGTACCTGAACAGCCTCTTTCTTCAGTTCTTCAC TGTGCATGCTGACCTGTATTTTTGCTCCTCCTCCCTCCCCGACATCTCAT GGTGTTCTAATAGGTTTATTATTATTATTTTTATTATTTTTACTGTGTAT TCGCTGAAGGTTATGTACCTATATTTGCTTTATACCTCTATTGTCATTTT CATTTTACATTTTCTTTAGCACATTTTTATTTAATGCTGTTTGCTATTAC TCCCCGTGTAGTTTTTGTTTTCATATTGCTATATACTATACTCTATGTTT TCAGTTTGTCAGTTGGCCATTATTAGTATTATTATATATAATATGCATGA TACAGTAATTATGCATGGCTCTATCATTGTTTTTATGGCTGGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTCTTTCCAATGGAGTAGGAATGGTTCTTTTAAAATTTTTA GATTTCGAGAAAATTAGTTTTAAAGAGAGAAACTTTTTTGTGGCGCACCC GGTATAAGTGCAATGTAAATATTTTTTCGCCTGCGGCGCTTCGTTTTATT TTACGAATATTTTCAAAACTACTTTCAACATTGAGTTGCGAAAAGTCAAA GCAAGAGAAGTGTTGTGTATCGACCAGGGGTTAAAGAGGATGCTCACCCC AAAAATGAGAGATTGATCGAAACTGCTCGCTGTGGTTTTTGTGGTCTTAT GTGGACTAACTTTCTCCATTTTAGAATATCTTATAAGCTGTTTGACATTT CTTACACCAAAGTTTTATGCCTACGGCGCCAAAATTACAAACAACCCTTA TTTTTGCCAACTTTCGAATGTTTGAGGCCTCTTTCAGCCATTCATCTATT CATCTTTAGTGGAGAGTAAAGTAAGACCAGGAAATAACAAGGAAATAGAT ATCAAATTATCACCCGGGGGGTAATAGGGTTGCGAGCTGACGGGAGGGGG AGTGCCGCCTGACTTTCGAACTTTGGACCCTTACCGGGACTAGAAAGGAG AAAAGAAAGGAAAATTTTGGGAATTTTGCCACCCTTAGCGGGACAAACAT GACCAATTTTGACCGAATTTCGATCTTTCAGGGGGTAAAAAGTTGAAATT TTCCTATTTTTCCGACCCTTAGTGGGACTGAAATTTGATTTTCTGATTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCCGTACCCTCCATTTGCCTAAGTACCCCCCCCCCACCCGGGCATTACC ACCATCTTCGTATAAATAAAAGTTTATTAACACAGAGATTCCGGGCGTTA CTTTCAACCAGTCACTGCTGTTACAGTTTAATAGTTTCACTTTTAATGGT ATAGGGTGCAAATAAGGACAAAAATACCAGGGGCGCCAATGTCATAGTTT GCACCACCAAGAAAATTAAGCCAGGTCGCTACTGCCCTTAGCCAGTCACC AGTACAAACTGGATAAGTGTTTGTACTAGGCACCCAGCAGCTGTGTTGTT TTGTAAAAGGCAAATCAATATGTTATTATATTATAAAAAGATTTATGCTG GAGTGATTTATTCCAAAGCACTCAATATTATTTTGATGTAGCAAATTCTA TTTGAATTTTATGGACACTTTTTGGACCACTCGGTATTTACAAAAATAAA AAAAATAGAAAAAATAGTTATAACAGTATTAAAGTCTATTCACGATAAGT GTGCACTCTTTTTTCATTTACCTATAACTTTTGAAGGAATTCTTCAATCT TTATAAAGTTGGTATCATTGAAAAGATATTAATGAGTGGAACAATTTGAA ATAAAAAAAACTTTAAAAAGATTATAAAAATGAAGATGAAAATGAAGAAG AAAAAAATGAAGATCTTGTAGAAAAGTGCTATAACTATCATTTTCACTGA AGTGAATCCTTTATCATCGAACGTCATCACTGTGAAAAAAATTCTCAAAA ATAATCATTTAGTCAAAAGATATCAAGCAAAGTTATAAGATAATTGACAT CTAAAAACGCTGTTTTCTGTGTTTTTAGGGTCAATCACTTATCAACTTTG TATCATAACTTTATATNTCTGCTGTTTTCTGCTGTTTTTTGGGGTCAATC ACTTATCAACTTTGTATCATAACTTTATATTGAATAAATATTTTAGCAAA ATTTCTTTACAGTGATGACCTCCTAAGATTAAAGAATCTCTCCAGTAAAA ATGAAAGTCATAGCACTTCTCTACAAGATCTTCATTTTTTTCGTTTTTAT TTTCATCTTCGTTTTTGGAATTTTTTTAAAGACTTTTTTATTTCAAGTTG TTCCACTCTCAAATATCTCTCCAACGATACCTAATTTATAAAGATTAAAG AATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGT GAATAGACTTTAGTCCCTTTTTATGTTTCATTTTTATTTTATTTAGTATT TTCCACACTTGCTCTCCTTGAGCTCAGATCTCTGTCACAATATACACGAA AATAAAGCTACATTATTGATATAGTGATTTCCACACTCACTCCCCCCCCC TTCGAGAGTCATGTCCCAATGACAAAACTATTTGATTCTCAATGCAAACA ATCATTTGTACTTTGTAGTGAGTGATAACATAATCAATATTCATCAGTTC ATTAACAATAGTCTTGATTACTTGGATCACAACTAAGATCAATGCTTGAG TAACGTATTACCACGTTACTAGTGGCAACCCAACTCGTCACTTCAATATA GCCAACATCTCAAAATGTCGGAGTGACCTATTCAGACTAATTAAAAACCA CGTTAGTTACAAGCCACATGACAGTTAAATGATCACTTCAATATCAAAAA GTAAGAACTGTTTCAAGCAGCGTTTTCACTACATACCAAGCTAGTCAGGT TCTGGGTAAACTCGTTATGACGTACTTCAAAACCAAGCACCGTTGGGTAT TAGTATTCAACTTGTTCATTGCAAAGCGACAGGTTTGAACCAACATCCAC TAAGTGACCCACCAACATTCAACCAAATGATCCACCAACGTCTGACCCAC CAACATCCAACCAAATGATCCACCAACATCTGACCCACCAACATCCAACC AAATGATCCACCAACATCTGACCCACCAACATCCAACCAAATGATCCACC AACATCTGACCCACCAACATCCAACCAAATGATCCACCAACATCTGACCC ACCAACATCCAACCGAATGATCCACCAACATCTGACCCACCAACATTCAA CCGAATGATCCACCAACATCTGACCCACCAACATCCAACCAAATGATCCA CCAACATCTGACCCACTAACATTCAACCAAATGATCCACCAACATCTGAC CCACCAACATCCAACCAAATGATCCACCAAAATCTGACCCACCAACATCC AACCAAATGATCCACCAACATCTGACCCACCAACATCCAACCGAATGATC CACCAACATCCAACCCACCAACATTCAACCAAATGATCCACCAACATCTG ACCCACCAACATCCAACCAAATGATCCACCAACATCTGACCCACCAACAT CCAACCAAATGATCCACCAACATCTGACCCACCAACATCCAACCGAATGA TCCACCAACATCCAACCCAAGTGATCCATCCATCATAGCAGTACAATTGG TGATAGGAGACGGCCTATCACACGGGGTATAGTGTTCTCTTTGATAACGT AGGCATACATGAGGTGGTGGGCCATTCACAGGAGGAAAACGACGTTGTGT TGAAGTGACAAATATGTCTGTTCGAGTCATCAATCAGCCCACCGTTAGTT GTATGGAAGTATTCGCTCGAGTCTAGTACTCAGTGAGCCTCTTGGCTCGA ATCACTAAGATGAGAAGGTACTGCCAAATCATCTACAGTACCAACAGGCC TGATTGAATTATCAGATGTTGATGTAGGTTCATCCTGTACCGCATGTATG ATTTGTGCTTCAAAAAAGGCAAATTCTACGCTGAACTTGTTTACTTCCGT TGCTTGATTAACATAGCTGTCACTGTGGGTTCAATTTCAGAAGGGGTCAA AGTAAGAAGGGGTCAAAGTAGTTGATGTCTTCCTTGTTTCTTGATTTTCT TTATAATTGTCATCCCTGTCTTGACTTTTTTCCATCTAATTGCTTTAACA TATATAAACAGGAAGACTTTCAGCTTTTTCAACCACCGCATATATTTCAT TCTTATAGAAAAATCTCAATTTACCTGTTCCACCTCTTTCTGATAGGTTT TTGATTAGTACACAATCTCCTTCTACCAAGTTTTCACAAAATGATGTTTT GTCGGATCTTTGGTTTTCAACCGCATGATGTTTTTGAGCATTTTCGATTG CGTTATCAAATGTTTTTCTCCATTGTTGAACAATTCTTGAATATTCTCTC CGCAGCAGATTTTCCCTTCTTGTTCTTAGTTGCAAATGTTTGACTGAAGC GGGAGAAATGATCAGTTACTACTAACAGATATATTCATGATGATAATTTT TGAGTTTCACGATGGCCTTTAGACGTTTGTTTGTCTCTTTCCATCATCGA TTGGTTACTGTTGGTTTGATTTTAGTTACTACCCACAGATATTCAAAATT ACCGTTGCATTTATCCAACTTGAGATAATCAATCCCAATGATTTCAAATG GTTTTAATGACCTGATTGGAGTCAATGGTGCTATTTGTTTACGATTGGGA GTTTTGCTCTTAATACATTCATTTACACAGTTGTGTGACATGTTTGACAT GTTCAGGATATTAGGTTTCATACCCGGCTAATAGATCCTTATTTCGCTTG GTCGCAACATTTTGTTGCGCCAAGATGACCTCAGCCTTCATGAATTGTCT GGTAGAACCGATAGTATCAATTCTCTCCGTAAAACTTCGGGTACAACTAT AAACTTTAGAACAAATTTGCTATATAGTATATACTATTACCGGAGCCAGT CCCGGCACGGGTCTTTTGTGTAACAAAAGTTAATTGTCTTTAAATAAATA AATAAAAATGAAAATATTTTTTAAACAGTGTGATGTTTAAAAAATATACA ACCTCACTCACGGAAAGACGACAAGACTTCGTTCAGCTTTTGATCTTTCA GTGCTACTTGGTCTGAGGTACAACCACCATCAATCCATTATTGGTTGAGC GTTTTAGTAGATCCCGAAGCTCCCACACGGTTACCAATTCTCTGTTTTCC CTTCTTCCACATTTTATATTCGTGTAAACGTGATGGGAAGTCACAGTGTT TGTGATCCTTACCAGGAAGATATTTCACCGTGAAGTTATATTGTGCCAAA TTTGCTATCAATCTAAGCCCAATGGCGTTTAATTTTGCAGTTGTCTGTAT GAATTGTTGTCGTTGTAGACTTTAAACTGTACACATACCGATCAATTTAG AGACAAGAGTTTTAGTTTTCCGCTATGATTGCGGTAGTTTTATTTAGATG GTGACAGAGTCCTTGAACCATAACAAATCGCTTTCAATTGTGCATCATCA TTTCCCTGGTATATTACCGCTCCCAAACCTTTCTCACAATCATCGCAATG CAAAACAAACTTCTTGTCAAAATTTGGGAATGCATTACTTTTGGTGACTT TTGGTGATGTTCCAAAATCTCCTCAAGAATGAGTTGATGTTGTCCGGTCC ATACAATGGGTGTCTTTGATGATTTTTATTGCTGCTTAATTGTTTGTTCT GTTCTCAACAAGTCGTACAAATAGTTTGATGCGAAGTTTTCGATGGAGAA GCGATAACAATTTATAAATCCCAGCAAACTTCTCAGATTTCCAATATTTG TGGGTGGAGATCTCAACTTCTCAATGACTTTACTTGATACTGGATCCATC CGATGGCCTTCTTGTGTGTCTCGCAAGAGACTTCTTGATCTCTGTTTTGA ATATCTCAGACTTTGGGTAACCAGCGATATGGGACATGGATAGGAGTCGA GTCTGATAATTTGATACCCATAACAAAATCTTTCAGAGTCTATTCAGATA ACCAATATCAGTTTTAGCCTTTGAAAATACATCACTGTACTCATATACGA TCCCCTCCACTTTTTCTTATAGTTCTGGGTGCAAATGTTTTAGGTTAATG GGAAGGTGCCATTTTTCAGTTTGTTCCTCCATACCAAGTGTATGCACGTT CACGGTGTTGACGATTACAAGTGTCGTTTGGATCCAGGGTAACATGACGA TCAAAACAGTTCATCACCAAGATCTCAATAGTTTGATTGGGTTTGGTGAG ACATTTCACAAACTCCAGTTGTTCATTTTCCTCCGTTTTTCGTTCATTTT GAGCTTTTCTCCAGATTGGCTCATTCAATCTTTCTGATATTTTGCACAAA GAATCAAAAGTGAAGAAGCCCTATTTATTTTTGGTCAATTTGGGCCAAAA TATGCCCAAAAATGAGCTTTTGGGATTTCCTTGAGTTTGAATCATTAAAT ATTTCTGATTTTTCCCATAAAAACAGATCACCATCATAGGGAAGAGATGG TTCGTAAAAAAGTTTTTTTCGGCTCAGAAAATGAATTTCTAGCTATAAGA ATCACCACTATTTTATGGATGTGTTTTTGCTATTAAAACTGTACCTTTAC AGAAGATTAGGCTTTAAGTTTGAAATTTTGAGTTGTTGATATATTTTTTA CAAGAACTGGGCCAAATTCGTAATTTATTTATAAGCACATTGGAAAAAAA ATATTTTTACTGGTCTGAAAAGCTTAAAAATTGTCCTATTCCGCTGAAAT GCAGTGTACTTTTTGCTTGGATGAATTTCTACAGGTCTTCTTTTCATTAT TTTAAGGTTTTGTTGTTTTTTTTTCAACTTTTTTATAAGCACATATGTTT GGAAATTTGGCCCAAATATGCCCAATAATATGTGTTATTCTCGAGATTTT ATATTAGATTTTGTTTACATTTTTTGCTTAAAAGTAGGTTACTACCACAG TCAAAAGTCGGTTGAAGCAGACTTTCATAAAAAAATCTTTTTGGGTTAAA AAATGAATTTCTAGCTATGAAAGAATGTAATAACACCAAAGGGTGCATAG AGAGAATATGAATATAGAGAGAAGGTGTTCTTAACCCGATTTTTCCGCAG TTTGATTGTTGAACCACCGGGTCCGTGACATGAGTATGTGTGAAATAAAT GTTTAATTTGCCTCATCAAGGTCCGGGAAAAGAAAGTGCTTTTAGCCAAA CAAGAGGGCTTGAAATCAAAAATTTTTCCGTCGGCACAACCATGGTTGTA CCTCTTTAAAAGTCAATTATTTTCCCTTTCTGTATACCTTGGTTCTAACT TCAAGTTTGAGAGAGGCTTTCTCACTTGCGCAGATACTGAAAGAAATTTA AACTTTTTAAACCATGTCGATACATCACAATGTTCTAGAGTTGATAACAT TTTATATAACAGACTGGCTTCTCAATAGCCCCCTTTTCCCAACCTCATTA CATTTCTGTCACAGTACAAAAATGGATCTATCTGATCAAGATAACCACTT CTTCTTTAGTAATATGTAACGGATTCTAAATAGCACTAAACCAAAACTTA GCTCATGCAAAAAGTTGTCAAATTTTTTTCTCACCCCATTGAATTTAAGA TTTTTAAATTCTTACCTCATTGGGTGCTTAACACCCACTGGGCACAGAAA CAGGGGTGTGCTTAGGGACAAGAGCATTGCTAAGAACTATATATTTTCGA GTATCCCCTCTTCAGGGGTTATTTGAAAGTGCATTTGCTAGTTGGTTGTA ATTTTTGGCGACAATATTATAAGGCTGCTTTGCTCAAAATGCTTTAAAAT CAAATTTGTTGGACACCAGCTCTAGTTTTTTCTCTTTTTTCTAAGGGAGG TATTCAAATCTGTAGGTCCTAACTCGTAAGAAAAAGTTTGAAAAATTGAG AAAAAAAAGTGAAATTAATGATTGATATCAAAGGAATGTGTTGCTGATCT ATTACTTTTTCATTTTTTGATATTCTACCCCTTTTGTCAGATTATCCAAG GTTGAAAACATTATTTAAAGCAGATTTTGCCAGTAACACTACGTGTCTCA AACCATTTCTGCACGTTGTTTTTTTAACTTGATTTTCTTTATGATGGACC ATATAGATGAACCCATAATCTGCGGCCGTGTCAAAAAGATTTCTTTTTCA CTACATTTTTTCTATTTTCGCCTAAATATGAAAATTTTTTTTCTGCCTAG GTTCTGTATCGTCCAATGGTGCAGAAATATGACATGTCCATTCAAAAGAC TCAAGTGGAGAATAGACGGACCAGTAGTATACCAACCTTGAAATTTTTGA TTTTCAACCTTTGGCCCTTTCCGTGGTGACGTCTAAATATGATGCCAGCA AGGGGTAAGGATTTATTTTCCATTTTGATTTTGATATTGTCGTTTTAGTT GACAGAAATTGACCGTTATTTGACCATCAAATTCGTAGTCATATCCCGGG GAGAGAGGCACTAGATCTGAAAATCATCGCATGCGCGGACAAAAATTGGA CTCACTTTATACATCGTCCGCTGTCTCAGTGAACCGATGTCATTTGGCAA TTTGAAAACCCACTGGAGCTATTATGAAAATAGTAAAATTCGACCGGGTT TCAACTACAGGCCTCATAACCCCAATTTCAAGTCTGTGACCGCAGTCGAA GGGGACATGAAGGCTCCTTTTTCGAAAGCTATCGAAGGTAACCGAAGGTA ATTTAGGGCGTCACTCGTTCTCTCTGGATTACTCTACACTTATTCTTTAA CCCTTCACCAAGAAGGGAGGCATCAAGCACCATTTTTGTACTAAGTATGA AGTCTTTAATATGACTTGCAGTCGAGGATTTAACTAATGACCTTGCGTCA GTGTAGCTGAATACCCTAACTTTGCGCTACGAGTGCTCTTTTTTGTTAAA TCCAAGCTGTGATATCTTTATATCCTAAGAACTAAGCTAACAGAGGCAAT ACATTAGAAAGAAGAGCGATATTCCGTAACAACCAGTGATTGAGGAGACG TCATTGTTTGCGTCACCGGTGAAAATCTTTGTATTTCAACTCATATTCGA AAGTTTTGAACTTCGTGGCCTCTTTTCTATGTCCCAGCTCTTGTTGTACG GTTTGTTTTAAGGTTTTCAAGGATGTCTAGACTTTAAGGTTAACGAGAAT GAATTGAATTTAAAAAACTTTGTAAGTGCAGCAAAAGAATTATTTTGATA ACTTTGTGTTAATTACGTTGAGAAACAAAACTACGTTAAAAACTTACTAC CGTAAACTTCTCTCATCCAGAAAACCAAAAGAAGTCTGGAAGCTTATTCA CCGAATCCTCCACCCAAAGAAAAGTGTTATCAATATTCAACCCTCC

Coding sequence (CDS) from alignment at sc0001406:6805..20750-

>TCONS_00036039 ID=TCONS_00036039|Name=TCONS_00036039|organism=Clytia hemisphaerica|type=CDS|length=990bp|location=Sequence derived from alignment at sc0001406:6805..20750- (Clytia hemisphaerica)
GTTCTGTATCGTCCAATGGTGCAGAAATATGAGATAGAAGCGCCCAAGTC
ACATATTATAAAAAACAATTAGAACTTCTCGAACAAGAAGAACAGCGTGT
TTTGAGCGAGATCAATAATGAGGAGAACCTCTTGCTGCAACAGATAGAGC
AAAAGAAACGTGAGATCGACCTTCTGAAAGCTCGCAGGCTCCAATCCCAA
TCGATCCAATCAACGAACTCTTCTGTCTCCGCCTCCCGTCATCAACCCGC
CCCCACCCCAACGTCTCAAGCTACAACAAACGCCGCCATCTTACCTTCGC
TGTTCGATGACGATCGCCCTGTACGCCCACAAGTTTTGCAAAGTGGATCT
TTATTAGAAAACTCTAGAGGTCATCTTTCTGACCCCCTTGCCTTGGCTGT
AAATAATGTTCGTGGTGGAAATGGTAATGTTGGTGGAATTGATAGCACTG
AAATCTTTCTTCGACCATCTCGTCTGTCCAACGATGGGACTCGTGGTTCT
GTATCGTCCAATGGTGCAGAAATATGAGATAGAAGCGCCCAAGTCACATA
TTATAAAAAACAATTAGAACTTCTCGAACAAGAAGAACAGCGTGTTTTGA
GCGAGATCAATAATGAGGAGAACCTCTTGCTGCAACAGATAGAGCAAAAG
AAACGTGAGATCGACCTTCTGAAAGCTCGCAGGCTCCAATCCCAATCGAT
CCAATCAACGAACTCTTCTGTCTCCGCCTCCCGTCATCAACCCGCCCCCA
CCCCAACGTCTCAAGCTACAACAAACGCCGCCATCTTACCTTCGCTGTTC
GATGACGATCGCCCTGTACGCCCACAAGTTTTGCAAAGTGGATCTTTATT
AGAAAACTCTAGAGGTCATCTTTCTGACCCCCTTGCCTTGGCTGTAAATA
ATGTTCGTGGTGGAAATGGTAATGTTGGTGGAATTGATAGCACTGAAATC
TTTCTTCGACCATCTCGTCTGTCCAACGATGGGACTCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021183XLOC_021183Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036039-proteinTCONS_00036039-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036039-exon-sc0001406-1575043694:20287..20750TCONS_00036039-exon-sc0001406-1575043694:20287..20750Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1575043694:7797..7950TCONS_00036039-exon-sc0001406-1575043694:7797..7950Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1575043694:6805..6880TCONS_00036039-exon-sc0001406-1575043694:6805..6880Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1510915933:20287..20750TCONS_00036039-exon-sc0001406-1510915933:20287..20750Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1510915933:7797..7950TCONS_00036039-exon-sc0001406-1510915933:7797..7950Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1510915933:6805..6880TCONS_00036039-exon-sc0001406-1510915933:6805..6880Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1491911889:20287..20750TCONS_00036039-exon-sc0001406-1491911889:20287..20750Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1491911889:7797..7950TCONS_00036039-exon-sc0001406-1491911889:7797..7950Clytia hemisphaericaexon
TCONS_00036039-exon-sc0001406-1491911889:6805..6880TCONS_00036039-exon-sc0001406-1491911889:6805..6880Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001406supercontigsc0001406:6805..20750 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.286677 0 0 0.106123 0 0 0 0 2.1608 3.13817 0.708699 0.794065 0.368241 0 0 0 0 0 0.0777601 0.101713 0 0 0 0.222786 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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