TCONS_00036024 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036024
Unique NameTCONS_00036024
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3686

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036024 ID=TCONS_00036024|Name=TCONS_00036024|organism=Clytia hemisphaerica|type=transcript|length=3686bp
ACCTTNAACAGCAACTAGAAAAAGCTAGACATGATCTTCAACAGATGCAA
CTAGAAAAATCAAGTCTTGAGGCTGTTCTAATCAAGGAAAGGGAGCAACA
TAAAGAGGCTTTGTGGAAAGTGAAATCAGAATTTCAGAAGATCCAGGAGG
AAAGATTGCaatggaaagaaaaatatttaaatatctGCATGAGAAATGGC
AACACTacTGAGCCAATTCAACCAGGCAGAAAGCGCAAGCTCCTGACAGC
TGAAAACGAAAATGAAGAGTTCTACACGAATCTTGCAGCGACCTTTGGGC
TGGCTGGTCAAGAAGAACAACCTGAAGAAATCGTACTAACCCTGGTCTCG
GAACAATCAAAATCGTACCGTATCTCGATTCGGGAGTGCCCGCACTGTGG
AGTAGGATTTTGTTCTTCTTTTGGTCTCAGAGAGCATCTCAAGAATTGCG
AGCAACGTAAAGCGACCTTGGAATCGCAACAAGGAGATGCTGTTGGTGAA
GGCGGCTCCATCATTTCTGACGTAACAACGTTAACACATACGGTTGCACA
CGGCGGTTACCATAGATGCGAATTGTGTAAAGTCGATTTCGCTACTGAAT
CAGATCTCATCCAACATAACCAATATCATCAAGGGACACACAAATATTTA
TGTCGCAAATGTTACCGAGCCTATCAATCTAATCCTGGACGCTTGAAGCA
CGAGCAACTTGAACATGGCGCCGTTCCAGTCCTTATCTGTGATATCTGTG
GTAAACAGTTCAAGAGGAAAGACCGTCTGAAAGACCATTTCGCCACCAAA
CATTCCCTCGCCACACCGCACGAATGCCCGTTCTGTGACGCCGCCTACAA
ATTACGGGATTACCTTCGTAAACACGTCAATACAATGCATCCAGGGAAGA
TGTTACAGCATGCGAACGCCGTCATGAAAGAGTCGGACATGGAAATCCAA
ATGGAGGTGGAATCGGAAGAAGCGGCCGAAGTGGTGGCGGCCGCGGACGT
TCTGAAAGAGCACAATGGCGAAACGGAAACACACGTCTTAGCTGAAGTTC
TCGAGAGTGAAGTCGTTGTTGCTGAAATTGACTCTAAGACTTAAATTTGT
CCTTAAATAGACATTCGCTTTATAgacattttattttgatttcttaGTGA
TATTTTCACTGCATCAACTTGATTTTAATTAGTGGTGGTTTTAATTTATT
CTactcttaaattttgatgtctaGGTAATTTGCTTTTGTGTATAATTTTT
GCGTGATGTTATTCGGTAAAACccaaattgattaaaaacattctCTACAT
TCTCATACTTCTCCAAACTCAGTTGTTTGATATTATTGCACCTCTGAGTT
ACATTTTCGTGAAATATAAATGTCAAATACACCGTTTAGAAGTCTCGCTA
TCTCCACCGTGTTCCACCGTagaaacggtaggtaaaaatgcgcactttag
tactgtggaaggttagaggaatgtaaacattgtcaatttttttccttcct
ttaaagagaatgatttagatatttgaacatgatatcaatgataattttat
ggatctctcctgaaaatttcacaaaaattcatctagaggaagagaattta
tgattaaaaggagttctttacctaccatttctctgctgggtttcctTACG
AGAACCGGAATTTTACCTAACGTTTTTTTacggggagagtgaagttttct
acggtcgctaaaatcaaaacaatgggaaattgtttggacgcgtgcgcagt
cgacactactaAACGGTGTACAGTATTACCAAAAAAACTTTATAGCTTGC
CTGTCGGTAATTTTTCCCTGCTGACAAAAAGGTTTTTTACCTCTATATTC
GTGttatcttttatacggaaacacacgaaaagcaccgggcgtttgccact
agttttgaatttaaaaaatgaaactgaaaGATATTAATTAAGAATTGCGC
CATTTCTTTTTGCAGTTGCTGTCATTATCTTGAAAAAGAAGAGTGGGGTA
TCTTTACCGAACGGTGTGACAGATGAGAGCGAAATGTATTCAGGTGAGCG
CCATGAAGTTGAATCGTTTTCCATCGGGGAGAACCAAAAACTACGCGAAA
CGAAAAGTCGTTTGGATAACCTCAAAGCACGATCTTTTACGCCTGAAGAT
GTCTTACAGCAACAGCAGATCAAAACTAGCGAACTacaaaagacaaaaga
gagaatcaAAGATGCTTTCAGCCACACTAAGCCTTCGAGAGCGGAAAGTG
ACGTTTCACACCGTACTCAATCACCCAGAATGGACAACGTAAAACTTTCA
AGCGATGTTGAAACTGGATACAAACGATTTTTCCGCATTCCTGGTGAACC
GCCTACTCCGGAACAGACCACGGAGAAAGATAGCGAAGAATATAAAGTCT
TTGTATTAGAAGATGACCAATCAAAGGAATTATCGAGTAACCCGACATCT
TCGAATCGTGAAAATAACCCACGCGATTATTCTCCTGTTAATTTTTCGAC
CGATATTTCTATAAAACGACACGACAAAATACAGTATTCAGTGGAGCACC
ATAATTCTCATGGTACGTTTCCAACTCACCAAACCTTCTCACCAAATACT
CGTGATAATCCATCGTTCATCCGCCCTGGAGTGTCAATAAAATCTTCTGA
AAAACCTACAGAAACGAACCTGTATGACAGCCCTATGTTTCACTACAACA
ACCGAATCATTTCAAACTTTAATAAACCCCAAGCGAAATTTCGAATGGCC
CATCCAGGTGTGGATGAACTTAACTTGCAATCCAAGTACGATATTCAACA
TGATCACCAACAGATGAAAGACCCTCGGAAGGAATTTATCGAACTTGATC
GCAAATTTGATTTCGTAACAGAAAAAGAGAAAACGCGCGCGAAAGATATG
ATTAATGCTTCCATGGTAACACCTCATGAGGAGAAAACGAACCAATCAGC
GACGAACCTTCCTGATTCTCCGCAGAAAAAGAAAGTACGGCTTGCCCTAA
ATCATCAAATGGCACCGAAAAGGAAGCCGAAAAAAGCCACTGAGAAAGCT
GCGACTCCACGCTCAATGGCGCTTACTGATGACAATCCTTTCTCGGGTCC
TAACAAGGCAGCTGAGGAGATTTCCACACTCGTTGAAATCGATAAAGACA
TTCGCGCGGAACTGACGCAGGAAATCAAAACACTTTACTGGCGAATcgaa
gaggaaaagaaatatgtttGTAAATTATGTGAGAAGACATTCGAAAGGTT
CAGCAATTTGAATGCGCACGTAACAATGCACCTTGAATTGAAACCGTATA
TTTGTAAATCATGTGGTTCCTCTTACAAACTGCGATCTCTTTTGAATGAT
CATATTCGAATAAAACATCTGAAGAAGTCGGGATACGTCAATTGTCAATC
GTGCAACGGTAGGTTCAAACTAGGTTCCAGTTATTTGAAACACCGAGCGT
TTTGTACAAACGTGAGTAATAGTTCGCCAACGAAGGAGCAAGATAACTCG
ACGAATACTTCTCAGAATGAACTTAAAGAAGAAACTTGTCTTGAGTAAGG
AAGAAAGAAGAATATGGTGGAACCTTCATTAGGCGGACGCCTTCGGAACA
AAGAACCAGACTAGTGTCcactaattagaagtgtccgcctagTGGAGGGT
TTTGAATTTCGGGCCCAAATCTCAGAACTAAACTNN
Run BLAST on NCBI

transcript from alignment at sc0001405:39662..49515+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036024 ID=TCONS_00036024|Name=TCONS_00036024|organism=Clytia hemisphaerica|type=transcript|length=9854bp|location=Sequence derived from alignment at sc0001405:39662..49515+ (Clytia hemisphaerica)
ACCTTNAACAGCAACTAGAAAAAGTAGGTTACTTTGCTCTTCTTTAGTCT ATGGGGTTCAAGATGGTATTTCAAAACCCTTGCTTTTCCTTTACCTTGTA TCATGCTGCACCACATGCTCTATTATGGAATTTTTACTCCTTGCATAGAG GGTCAAGCTAGTCTCCAGGAGAATTCCATTGGCAAATGATATTAATTGTT TATTAACAGACATTCACCATCCACGACTCTTTCAGGCTAGACATGATCTT CAACAGATGCAACTAGAAAAATCAAGTCTTGAGGCTGTTCTAATCAAGGA AAGGGAGCAACATAAAGAGGTATTATGACATGAATCTCAAATTTAAAgat gtttttgtttggtttttgcAATCCTCAGATAACTGATTAACCTGGCTGAT ACAAGGTTTTGAAAGTATTTATCATAGTTTGACTGCATAATGCTATGTAA GCTGGGACCTATTCTTGGTGGTGTGAAATGACATCAGGTGCCAACGATCc taagttttgataaattttgtcAAGGAGTGCCTACGTGTGATTTTGACACA CTGAAAATTTCCTTCTTTCAGGCTTTGTGGAAAGTGAAATCAGAATTTCA GAAGATCCAGGAGGAAAGATTGCaatggaaagaaaaatatttaaatatct GCATGAGAAATGGCAACACTGTAAGTAATAACTGAACATGAACATTGCAA AAATGTGTCTACTTATATGAAATTCTCATAAATGGGCAAGCATCTGTTGA AATGAAATACAATgtgatctttttttaaaaaactaccCCGTTTTTCCTAT GTATTATGTAGACTTTTTTCCTGTGGACTATGTACCTgtgacttttcaat ttttttagacTGAGCCAATTCAACCAGGCAGAAAGCGCAAGGTTTGTATT TTGTACTTTTCCTATTCTTGtaaaatggagaaaatttttcattacTTTCA CTTCTGGAAGCCCAttgtaaaaaaatcatcaacttCTTCATTTGTTTGAT ATTTCAATCTCTTGTTGACTTGTTTTGAATTATAACcccttcattttctt ttgaataaTCGTTAACGACTTTCAAGTGAAAACCTTCTCTTTCAATCatc aaaaacaatagaaattgaGTGTCTGTAAATAAACACTATCATATGTTAGT AAATGGCCTATAATAACTCCCAATTTTATGAAACCCTTATCCTTTTTAGC TCCTGACAGCTGAAAACGAAAATGAAGGTAAccttaaaagttttttcatt ttgtattttacattcTTTTTACTGTAATGGAATCAATACTCGTAAGAttt aatttcctaaaatttaatttttattcgacaaaaaattgctaaattttCTG TATAAGATTTTTGCAAATCTTATCAaatgcagattttatcaaattcaaaa ttcagCGGAGACGCTGATTTTTGTTCTTACTAGAAAATATTATTCAGCAA TCCAATTGAATGCAATTTGGAGATTGATTTTTCgcatgaacaaaaaaatt agcAATAATGTCTCATTTAAACTCAAGAAAATTGATATGATTTTAGAAGT ATTAACAATAATACTATAAATGAATAAATTACTTCTGAATACAAGGGCAA AGTATAGATATAAAATGAAACTGGAGTGAATAAGTGGAGgtcaattttca gtttttttacccgttttttaaatgattttcttaAGAGTGATCTTTCAAGC ATCCTTCTGTTTGTACCATAGAGTTCTACACGAATCTTGCAGCGACCTTT GGGCTGGCTGGTCAAGAAGAACAACCTGGTAagttaaaaagctctttttc tttttctatgtcTTAATGTTGTCAGAATGTTACTTTTGTGACGTTTTGTT CTTTCCCGGTCAAAATTGACCCAAGGGAAACCTGGAGTTTTATTACCGAA ATAATAAGTTCACTTCAGTATTTTTGTGTTTTCCTGGCATTATAGACCTA ACATAAAACCACTGACTAACTCTTTTCAGCTTTGAATTGTACTTCTTCCT TAAATGATTGCACAGAACAACAGTGTTTTTCTCCTATAGTAGCTCAATAA AAAATTCTAGTATGGTGACTTGGCCAGACCTAAGTTGTAAATAATTCAAG GGTATTGTGACAGAAGTCTGCTGAGACCGTTCCATTTTTCCATCAGCCCT TCTAGAGCTCAAGGGAAGGTTTCGATGTTCGTTGTGCAAACTTGAATTCT ACaacggaaaaaatgttttgcacCACTTCAAACAGCAACATGGTAACCGT CCACATAAGTGCCCTCACTGTTCAAGAGCCTATGCACACAAAGGAACTCT CCAACAGCATGTCAATAATGTCCATGAGAATCCTGGAGCTTATATTTGTG GTATCTGTTCCCGAAAATTCAATCGAAAGGACTATTTAGATAAACACATG CATACACACTCTGATGTCAAAGATTTTGACTGTGACTCTTGTGATAAATC CTTTAAAACAAAATCTCTACTCAATGCTCATATATCTGGCATGCACAAAC AAGAGAAAAAGTATGTCTGTGATGACTGTGGATTTCGAACAAATTGGAAT TCAGCATTTATCGAACATAAAAAACTTCACACTGGGCAGCCAACAAAATA TAAAACTTCCAAAGAGGATAACAGCAGCGATTTGGACACTGAAATTGATT AAGGTTAATCCCTGCTTTGCGAACCTACCTTTTGGTTTCAGGTctctaaa cttttgaaatgtgTAAACTTGAGGTATGGCTGAAGAGCTTGGTGAATCTA AAAGctactttttttctttcgttttgtaGTGCCTCCTATCACAAATCAGC TGTGGGATCCTGAAACCAAAAGATTCGAGTGCAAAGAATGCAAGGCAACC TTTCGCATGTTTTCCGAGTTGAAGGCGCACATTGACAAAAATAAGTGTGT CAAGTACACCTTTCAATGCCCACAATGCAGTGTGGTATTCAGTAATGCAG CTAGCTTCACCAAACATTTAAAATACCACATCGGTAAGAATATTCGGTGT GACTTTTGTGGTGAGAAATTCATGCACGATAAAGGACTCCAACGACACAT CAAAATGTATCACACTGAATTCAGCCAGCGATTCCAGTGCCAATACTGTT CCAAGTTATTTAATCGTAAGACTTTGCTTGAGAACCACATTCGCAGACAT TTCGATTACCGTCCCTTTAAATGTACTCAATGTGACAAAGCGTTCAAAAC CAAGCAATATTTGACCGGTCACATCAATGGAGTGCATAAGAATGACAAAC AGTTTGTATGCGATAAATGTGATGCTCGTTTCAGTTGGCGTACCACTTGG AAACGTCATGTACAAGGTCACATCTTGAAAGCTAATAAGAAAAAGAACAA GAACCGTGCCGGGACCCTTCAAAACACTGTTGCCGCAGCTACAGCAACGT TAACCGTTCAACAACCACAAACTCAAACTGTGGTTACCATGCCCCTTCAA ACACAACTCGCCACTAACGTTGTTCAACTGACTCACGAAGTCCCTCAACT GACCGCCGAAAATCTAGCTGCAACTTTGGATCATACTGATCTTACCCAGA ATGCTTACGTGCAGTTAGCTCAAACTGTTCAACAGTTGACGCATCATCAA CCGCCTGGACTGCAGTAATACTACTTCCGAGGTTGCTTTGAAAAGACTTT ATTTAAAGGTGTTGAAAACATTTTGTTGATTATTGCTGCATTTCATATTT CAGTCATAGATTTAATATTATTCATTATTTCGCGATTTTTGTGATTGACC TTCTTACATTCATCAGCTCCTTTAATGGCAAATAGGTTTTGACATCAAAA TATGGGATAATTTTCACTACTCGCCATGCCCAAATCCTCTTTATTCAAAA CGCAAAAGGGTATGTTGAATAGTAGTTGGTTAAAAATCTTCTCGGCAAAT CACAAGGTGTCTTGTGACGGGTCCATCCGAATCACAACTTTTGATATGTG CCTCAATTTTCGcgttattttttctgaaaatattgTAGGATGACCTTTTA TACgttcaaaatatatttgattCTAGAAAGCTATCTTGATCTTATTTCCT GTCAATTACCGCAAAGAGAAAAGAAGCGAAATCACCGTTAGAAATTTAAA GGTTCTTTAACGTCAGGTATTTGCGAATAATAGCATCACCGATAATTtat ttattctcaacttcagttgagctacaatctgagaatgtctgtgtgtgtgt ctgtctgtcacaaaaactttagggcagcctggagacttcaaaaatgcttg gaattggctgaaattttgcacacttgatccttgggcaaatccctgggttt tttttttttttttcattttttcaaaattttaatttttggggcctggggac gagtttttagcctaaacgaggctaaaacccaaaatgccttaatttttctt aagccattaagtttacaattgggcctacaaatgatttcaaagatactgta gttgagccagtgcggttagcacgttcgacagttgcTTATTACCTTTTTGA CGCCCTGAATGTTGTAGCCTGCTTGGACTCTTCAAAACTACcttgaggga agaaattttgacgggGAAAAATTCGGTGAAttcgtcaaatttaatttttc ctgTCATCCGTTTGGGGTAAAGCGTTATCCCGCgaaattactttaaaaaa tttaagaGCTCGTACTCTAAATTATGAGATTTTCCTCTTTATTTCAACAG TTGGAAGACTAAGGAGCTGGAGTATTTCTTTTTGTGGTATTCTTCTCGAG AGGGAGATAGGAATTTAACTGTGGAAGTAATTCCccgggcaccaaaagcg aataaattttatttgctgtcctctatttttctttcacctaccactctgaa aaaaaaacaaaaattcatgtAAAGAGCCATATCAActgagtatcaaaaaa ccttgaaaagtgccaaaaaaaccacttaaaaatgaccaaaaaaaccttga aaacctttaaaaccccggaaaaaaatccgtagacaccctgtatttaaaaa agtagACCGTCAGCTAAATATTTCGAATGAACTTAACGTAGTAATTTCAT TGTACCGACATTAAATCGACAAGTACTTcataaatgttttgaaaattctg aacaTTTTCTAATGCTGTAACTCGTATATCTTAAAGTTTTTTTCCGAAGT ACAATTTTTTagggaaacaaaaaaatataggAAAACTTGGTTTGTTAATC GTATGCTGAAGAAGacctttttgtttgtttcattCAGAAAGAAGCAACAC CCGTATCGATTTACCGCCTTTGGAAATACCGCCTCAACCACCCGGACCGG ATGCCAATTTCAATCAAGTACCGGATCTAATCTCACCATTATCAATATTA TCGGACGCCGGGATCGATTCACCGACCATTGGCAACCATGGCGCGACTAT AGAACTTGATAATGGCTCGTATACCGTTGTTTTAGAATCTGGTCAACAGT CTACTAACCCATTAGACTTGTGTATGACTACTGGCTATTCGCAAATTTCT GACGTATATCCTAGTGAAAATCCTTTAGACTATGATACGATTTCGACGCT TGAGAAAGCACACGACCGATCGCTTTTAGAACTACCTAGCGAGGCTCTTC AGCTCGATATCTCCCAACAGGACTTATTGAGTTTCATCTTTAAACCTGAT GACGATTATGAGGATTGTAAAGAAAGCTTAGCTCACCGTCTAGAAATTAT TGAACGCTTTTCACAGAGATACGGTAATCTTTCTCCGGTCGTATTGTTAG AGCGAATCGACGTAGCAGCGGTCATCTGTAAGAAACAGAGTCTTCGTAAT AGAAAGCGTCGGGATTACGCCCGTCTCAACTCATACGGCTATTCACCTGA CAATGCAGAAACAAGCAGTGACTCGTCTTCcgaagaagaaaaagatgatA GCGGAAACGTTTGTGAAATATGTTTCGTAGAATTTCATACTGATACGGAA TTGACAGACCATCGCCGTGTTTGCAGAGCAAGAAATATGAACTCGTGCTC GAACATAAAAGTTCCTAATCCAACCACATGTGGACTTTATGATTGCCCGG ACTGTTCATTCAGTTACCGAAGCCAAAAGGCTTTAACAAATCATTATTTA TGCCACAAAAACCCGAACAAAGCTCACGTGTGTCGTGTATGCGGAATAAC TTTCCGTGATCTTCGTAAACTTGAATTTCATCAGTCCACTCATGAGAGAT AACATTGTCTTACCAACCTTTTCATCTCATTCATTTCTCTTGTATATATG AAGCTTTTATAtgtgaaaaaagaaaacttctCCTCTACCTTACTCTACTC TACAGCCAACTTTGTTTTCACTTTCGTGCCTGGTGTTTGAACAAGGTGAC CACACAGCAACATAGACCTCTAAggattgatgtttgtttctcaccCATGG TGACCACACAGCAACATAGACCTCTAAggattgatgtttgtttctcaccC ATCATCCACCTCGCGCTAACTTCTTTATCTCTCCCTCTTTAGAAGAAATC GTACTAACCCTGGTCTCGGAACAATCAAAATCGTACCGTATCTCGATTCG GGAGTGCCCGCACTGTGGAGTAGGATTTTGTTCTTCTTTTGGTCTCAGAG AGCATCTCAAGAATTGCGAGCAACGTAAAGCGACCTTGGAATCGCAACAA GGAGATGCTGTTGGTGAAGGCGGCTCCATCATTTCTGACGTAACAACGTT AACACATACGGTTGCACACGGCGGTTACCATAGATGCGAATTGTGTAAAG TCGATTTCGCTACTGAATCAGATCTCATCCAACATAACCAATATCATCAA GGGACACACAAATATTTATGTCGCAAATGTTACCGAGCCTATCAATCTAA TCCTGGACGCTTGAAGCACGAGCAACTTGAACATGGCGCCGTTCCAGTCC TTATCTGTGATATCTGTGGTAAACAGTTCAAGAGGAAAGACCGTCTGAAA GACCATTTCGCCACCAAACATTCCCTCGCCACACCGCACGAATGCCCGTT CTGTGACGCCGCCTACAAATTACGGGATTACCTTCGTAAACACGTCAATA CAATGCATCCAGGGAAGATGTTACAGCATGCGAACGCCGTCATGAAAGAG TCGGACATGGAAATCCAAATGGAGGTGGAATCGGAAGAAGCGGCCGAAGT GGTGGCGGCCGCGGACGTTCTGAAAGAGCACAATGGCGAAACGGAAACAC ACGTCTTAGCTGAAGTTCTCGAGAGTGAAGTCGTTGTTGCTGAAATTGAC TCTAAGACTTAAATTTGTCCTTAAATAGACATTCGCTTTATAgacatttt attttgatttcttaGTGATATTTTCACTGCATCAACTTGATTTTAATTAG TGGTGGTTTTAATTTATTCTactcttaaattttgatgtctaGGTAATTTG CTTTTGTGTATAATTTTTGCGTGATGTTATTCGGTAAAACccaaattgat taaaaacattctCTACATTCTCATACTTCTCCAAACTCAGTTGTTTGATA TTATTGCACCTCTGAGTTACATTTTCGTGAAATATAAATGTCAAATACAC CGTTTAGAAGTCTCGCTATCTCCACCGTGTTCCACCGTagaaacggtagg taaaaatgcgcactttagtactgtggaaggttagaggaatgtaaacattg tcaatttttttccttcctttaaagagaatgatttagatatttgaacatga tatcaatgataattttatggatctctcctgaaaatttcacaaaaattcat ctagaggaagagaatttatgattaaaaggagttctttacctaccatttct ctgctgggtttcctTACGAGAACCGGAATTTTACCTAACGTTTTTTTacg gggagagtgaagttttctacggtcgctaaaatcaaaacaatgggaaattg tttggacgcgtgcgcagtcgacactactaAACGGTGTACAGTATTACCAA AAAAACTTTATAGCTTGCCTGTCGGTAATTTTTCCCTGCTGACAAAAAGG TTTTTTACCTCTATATTCGTGttatcttttatacggaaacacacgaaaag caccgggcgtttgccactagttttgaatttaaaaaatgaaactgaaaGAT ATTAATTAAGAATTGCGCCATTTCTTTTTGCAGTTGCTGTCATTATCTTG AAAAAGAAGAGTGGGGTATCTTTACCGAACGGTGTGACAGATGAGAGCGA AATGTATTCAGGTGAGCGCCATGAAGTTGAATCGTTTTCCATCGGGGAGA ACCAAAAACTACGCGAAACGAAAAGTCGTTTGGATAACCTCAAAGCACGA TCTTTTACGCCTGAAGATGTCTTACAGCAACAGCAGATCAAAACTAGCGA ACTacaaaagacaaaagagagaatcaAAGATGCTTTCAGCCACACTAAGC CTTCGAGAGCGGAAAGTGACGTTTCACACCGTACTCAATCACCCAGAATG GACAACGTAAAACTTTCAAGCGATGTTGAAACTGGATACAAACGATTTTT CCGCATTCCTGGTGAACCGCCTACTCCGGAACAGACCACGGAGAAAGATA GCGAAGAATATAAAGTCTTTGTATTAGAAGATGACCAATCAAAGGAATTA TCGAGTAACCCGACATCTTCGAATCGTGAAAATAACCCACGCGATTATTC TCCTGTTAATTTTTCGACCGATATTTCTATAAAACGACACGACAAAATAC AGTATTCAGTGGAGCACCATAATTCTCATGGTACGTTTCCAACTCACCAA ACCTTCTCACCAAATACTCGTGATAATCCATCGTTCATCCGCCCTGGAGT GTCAATAAAATCTTCTGAAAAACCTACAGAAACGAACCTGTATGACAGCC CTATGTTTCACTACAACAACCGAATCATTTCAAACTTTAATAAACCCCAA GCGAAATTTCGAATGGCCCATCCAGGTGTGGATGAACTTAACTTGCAATC CAAGTACGATATTCAACATGATCACCAACAGATGAAAGACCCTCGGAAGG AATTTATCGAACTTGATCGCAAATTTGATTTCGTAACAGAAAAAGAGAAA ACGCGCGCGAAAGATATGATTAATGCTTCCATGGTAACACCTCATGAGGA GAAAACGAACCAATCAGCGACGAACCTTCCTGATTCTCCGCAGAAAAAGA AAGTACGGCTTGCCCTAAATCATCAAATGGCACCGAAAAGGAAGCCGAAA AAAGCCACTGAGAAAGCTGCGACTCCACGCTCAATGGCGCTTACTGATGA CAATCCTTTCTCGGGTCCTAACAAGGCAGCTGAGGAGATTTCCACACTCG TTGAAATCGATAAAGACATTCGCGCGGAACTGACGCAGGAAATCAAAACA CTTTACTGGCGAATcgaagaggaaaagaaatatgtttGTAAATTATGTGA GAAGACATTCGAAAGGTTCAGCAATTTGAATGCGCACGTAACAATGCACC TTGAATTGAAACCGTATATTTGTAAATCATGTGGTTCCTCTTACAAACTG CGATCTCTTTTGAATGATCATATTCGAATAAAACATCTGAAGAAGTCGGG ATACGTCAATTGTCAATCGTGCAACGGTAGGTTCAAACTAGGTTCCAGTT ATTTGAAACACCGAGCGTTTTGTACAAACGTGAGTAATAGTTCGCCAACG AAGGAGCAAGATAACTCGACGAATACTTCTCAGAATGAACTTAAAGAAGA AACTTGTCTTGAGTAAGGAAGAAAGAAGAATATGGTGGAACCTTCATTAG GCGGACGCCTTCGGAACAAAGAACCAGACTAGTGTCcactaattagaagt gtccgcctagTGGAGGGTTTTGAATTTCGGGCCCAAATCTCAGAACTAAA CTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021170XLOC_021170Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036024-exon-sc0001405-1491911889:39662..39684TCONS_00036024-exon-sc0001405-1491911889:39662..39684Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:39662..39684TCONS_00036024-exon-sc0001405-1510915933:39662..39684Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:39662..39684TCONS_00036024-exon-sc0001405-1575043694:39662..39684Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:39897..39980TCONS_00036024-exon-sc0001405-1491911889:39897..39980Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:39897..39980TCONS_00036024-exon-sc0001405-1510915933:39897..39980Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:39897..39980TCONS_00036024-exon-sc0001405-1575043694:39897..39980Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:40233..40331TCONS_00036024-exon-sc0001405-1491911889:40233..40331Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:40233..40331TCONS_00036024-exon-sc0001405-1510915933:40233..40331Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:40233..40331TCONS_00036024-exon-sc0001405-1575043694:40233..40331Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:40520..40552TCONS_00036024-exon-sc0001405-1491911889:40520..40552Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:40520..40552TCONS_00036024-exon-sc0001405-1510915933:40520..40552Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:40520..40552TCONS_00036024-exon-sc0001405-1575043694:40520..40552Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:40861..40888TCONS_00036024-exon-sc0001405-1491911889:40861..40888Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:40861..40888TCONS_00036024-exon-sc0001405-1510915933:40861..40888Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:40861..40888TCONS_00036024-exon-sc0001405-1575043694:40861..40888Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:41383..41439TCONS_00036024-exon-sc0001405-1491911889:41383..41439Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:41383..41439TCONS_00036024-exon-sc0001405-1510915933:41383..41439Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:41383..41439TCONS_00036024-exon-sc0001405-1575043694:41383..41439Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1491911889:46154..49515TCONS_00036024-exon-sc0001405-1491911889:46154..49515Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1510915933:46154..49515TCONS_00036024-exon-sc0001405-1510915933:46154..49515Clytia hemisphaericaexon
TCONS_00036024-exon-sc0001405-1575043694:46154..49515TCONS_00036024-exon-sc0001405-1575043694:46154..49515Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001405supercontigsc0001405:39662..49515 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.33301 2.12785 0.737534 0.326318 2.1841 3.16235 0 0.618056 0.306325 1.03926 0.3394 1.30889 2.15093 3.88282 2.55868 1.7676 3.80386 1.48751 0.633656 0.875171 0.488187 6.01139e-09 0.650025 2.22384 1.38375 0.256281 2.29644e-08 0.504719 0.000314173 2.97485
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036024 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top