TCONS_00036011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036011
Unique NameTCONS_00036011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2181

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036011 ID=TCONS_00036011|Name=TCONS_00036011|organism=Clytia hemisphaerica|type=transcript|length=2181bp
ATTCAGTTTCcggaaaagaaaatattatttatgCATCTTtcgtctttgtt
tttttcacttctaattttatttcttcttttttggtaattttctcaATATT
TCGTCTCAGTTTTTGTTGTCAACTTTATTTAATTCAAGAGACACGATGTT
GAATGGCTGCTTCTTCTTAAGGTTGTCTATCATTTCTGCGTTATCTTACG
AAGTGAGCGCCTTCTCCGCTTCATTTACGAATGCTTTGAAAGACACAAAA
ACAACAGATGAAAATGCCATCGTGCTCCAAAAGCCAAACATTGGACACTG
TTTGGCCGCATGCAATTTCGTTGAAGGTGGATGTCAATCGATCAGTTGGC
ATGGCGATGATAAGATTTGTCAGATCGTCAAAAATGACGGCACTGAAAAT
GATGGAGATAATGAATTGACGGGTTTTGCTTCTGGATGGGTTTATTACCG
GAAAAATGAACAACCGACTGATTTCGATCAAACATTTATGAAGTCAGAAG
AAGTGCTAATCGACAAAGAAGTCTCTTCGAAACCATCGTATACCCCTTGG
AACTGGCTATTTTCCTTCGACGTCAAAATGGCCGGTGCCGACGGGAACGA
CCAACGAACAGGAGAAATTATTCGTGTTACCGATAAAGGCGATATCAATT
CCATTGTTTTAAGTGTGGAAAAAAACACTCACAACCAACTGACATTGACT
TTCAAACGTGACGGAACTCAACATCACAAACTCATCACTGTACAAAATCA
TGATAGCATAATATTGAATTTTACACGGAGCCGTGATACAGACAATCAAC
agagtttagaaatcaaaaccTCAACAAATAATCTCTGGTTTTCTGGTTCC
AATCCAGTCTCAACTTTCAGTGATACAAACCTTGATGCTCGTGAAATCAA
AGTTTTTTATGCAAAAGGATTTGCAAGTAATATTCAAACCATATCGAGTG
TTCCAAGCTATACGCCAGAGCAAGCAATTGAGGTTTGTTACGATGAATGC
AGAAAGACATGCGCCACTGATATTCACCCAACAAATGGATGTAATCAAAT
GTTCCACTGTCCTCATACATGTAAGATGCGAGAATTGGGTCGCTCGGTAA
CAGAGTGTAAAGCTTCTTGCCAGAGAACTCCTTCTTCGGGTTGCAGTGTT
TCGTACCTTACCATCAACTTTAATCTTTGTGGGGCATGTAATCGGGCCGA
GTGTCCAACTCTCGGACCGGCTATCTCCGAATGTGAAAAGGGATGTGAAT
CATATCCTATGTAAGCGCTGGATccccagctagcacacaacgttgtttca
tcgttaatctaatgttcacaacgtccatataacgttagatgtacgttgaa
acaacgttgaaaTCTCTGGCTATTAGTGGTAACCACAGCTGGCACTCAAC
TCACTTGATTTTCCCGACCTAAACTTTTTTTCGTGTCATAAAAAAGTCTT
TGTACGCGTATAAGTTCacatttaatttgattttaaaaattttatttgca
cTCTAttcgtaaaatattttttttcatttaagtaTTTGCGCTATATtcgt
aaaatatttatttatgcCAAATAAAACCCACAATTCTTTCCTTCTCACTA
GAGATTTAACTCAGCCTGCGTGGAAAAGGAGCTACTAAGTTCTGCCACTT
AAAACATGCAAATATATTGAGTGAAGCAATTGTAAGTTAAGCAGTTCAAA
TTTTGGTTTACATAGAAATTATTATGTTCCATTTATTTGTAAATCTTGTA
CATAGAAACTATAActtaacaatttttttcataatttcctCTAAAATCtg
ttattcaactttttttataaactagGGGAATCTCCATGTTTTAtgaactt
tttttctcttttgggAGATTCACTTGCTCTCACGTTGAGAAACTCCTACT
GTGGTCACTCGGCCTGACGTGGGGTCCACACATAAGTCCTCTGGAGGCAA
GACCGAAAAAAATTACTCCGGATAGGCCCCAAGTGGTCTAGCGCGGTCAT
TCCTCCAGGGCAAAATAACGACCcctagatttttttttgttgtcattCTA
GCCTTTGTCTTTCTGTTTATCttatttatttaacatttttaaaattttga
aagttgaaGAATTTGTGTTTTCGTCATTTTAAATCTTATgttgtcttttt
attttaataatttgCAGATTCGCAACATCGT
Run BLAST on NCBI

protein sequence of TCONS_00036011-protein

>TCONS_00036011-protein ID=TCONS_00036011-protein|Name=TCONS_00036011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MLNGCFFLRLSIISALSYEVSAFSASFTNALKDTKTTDENAIVLQKPNIG
HCLAACNFVEGGCQSISWHGDDKICQIVKNDGTENDGDNELTGFASGWVY
YRKNEQPTDFDQTFMKSEEVLIDKEVSSKPSYTPWNWLFSFDVKMAGADG
NDQRTGEIIRVTDKGDINSIVLSVEKNTHNQLTLTFKRDGTQHHKLITVQ
NHDSIILNFTRSRDTDNQQSLEIKTSTNNLWFSGSNPVSTFSDTNLDARE
IKVFYAKGFASNIQTISSVPSYTPEQAIEVCYDECRKTCATDIHPTNGCN
QMFHCPHTCKMRELGRSVTECKASCQRTPSSGCSVSYLTINFNLCGACNR
AECPTLGPAISECEKGCESYPM
Run BLAST on NCBI

transcript from alignment at sc0001402:8116..14586+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036011 ID=TCONS_00036011|Name=TCONS_00036011|organism=Clytia hemisphaerica|type=transcript|length=6471bp|location=Sequence derived from alignment at sc0001402:8116..14586+ (Clytia hemisphaerica)
ATTCAGTTTCcggaaaagaaaatattatttatgCATCTTtcgtctttgtt
tttttcacttctaattttatttcttcttttttggtaattttctcaATATT
TCGTCTCAGTTTTTGTTGTCAACTTTATTTAATTCAAGAGACACGATGTT
GAATGGCTGCTTCTTCTTAAGGTAAAAATTTCTCCATTAACCTTTTATTT
CAACGCaacacagatttataaagcccaaagggcaaGATCACATGATTTTA
GCTGAAAAGTGTGCGTAGTTCGGTAGGTAATCTTACCTAAGTCCTGTTgt
tattacaatagaatttcagcacatgaccaataagaagctaaGGTAAGCgg
tatttcaaaaacaaaagtaatattttttgcgatatttacttttttgcttg
gaaaagcttaaaaCACTCTATCTCTTTGTGCCACGCACCCACATAGCCAG
TAGCCTATGAAACTCAATTTTTATGCACTATACCTTTCGGGACAAGAGGT
TTCCAGAACTTTTGTAGCTATCATGGGAATATATAGTTTTGTAGAAAATA
AGTTGGCTTATTATCCCCTTTCCCTTTGAGTTGTATCTTGCTGATGCAAA
ACGTCGGCGGTCTGAATgggattttgtttttcaaaaaggtgCACTCTGCT
CTGGTGGGACATTACGGAATCCAACTATGTAATAGTTATTGGACAGTtac
gagtacaatatgagaaatattttacgagttccgagatttttctgtaaaat
atacagaaaatccggaacgagtgaaatatttccatattgtacgagcaaat
gtctgataacttgtttatcggtgacccaaaaaatgcactttttgtgttgg
aaaaaagcgcagagcacttttgtagcaaagtggcgttagattgcttctat
cGCTACAATGCATCAACATCTTCTCGTCAATTTATATCTGGCTGGGTACA
ACAAAGGGTCTTACTGGAAGTTCTCTCCATAAGTGataagacaaaaaaat
gcccagctgagacacaacgttgtttcaacgtttgtaTAATGTTCCCAACG
TCCATATAAACTCAGATGAACGTTTAAACAATGTCTCAGCAGATAGTAGG
AGAATCGTTAAATGATTTCCTTTAATGATCAAATATTCTCAATCACTTTA
GGTTGTCTATCATTTCTGCGTTATCTTACGAAGTGAGCGCCTTCTCCGCT
TCATTTACGAATGCTTTGAAAGACACAAAAACAACAGATGAAAATGCCAT
CGTGCTCCAAAAGCCAAACATTGGACACTGTTTGGCCGCATGCAATTTCG
TTGAAGGTGGATGTCAATCGATCAGTTGGCATGGCGATGATAAGATTTGT
CAGATCGTCAAAAATGACGGCACTGAAAATGATGGAGATAATGAATTGAC
GGGTTTTGCTTCTGGATGGGTTTATTACCGGAAAAATGAACAACCGGTAA
TTATTATAGAGTTTTAAGAAAGAAATCACCAGTGACCGTAGCATAGAGGT
AGAGTATCTGTCTTAATCACAAAGTTATGTGATCGAccccgggtcatacc
aaagattcctaaAATTGTTGATGCTTacctgcttgatgctcagcaataaa
aaaagaaacaaataaggggagaaataaaataaaaagtgaaagTGATTCCT
CTACCTTCAGAACTAGAGAAAAATGAGCGACTCGACTGCGGTAGCGTATT
ATATTAACTTATCAAAGGGATACTAATTTTCTTGGAATTAATTTTCACGG
GAACTAAGTTTGGCGTTTCTAGATGTGTAGAATTAATCAACGATGAATCG
ATTTGCTTTCAGACTGATTTCGATCAAACATTTATGAAGTCAGAAGAAGT
GCTAATCGACAAAGAAGGTTAGTATCTTTTTATGCTAGAAAACTAGTCTG
TTTGATAATCATGTCAAAGGGTGGAGGCGTAATAAGGGCGGTGGGCGTTT
GCTAAAATGAAATAGAGGTCACGTAGGAGAgagagcaaaagttggtgaga
gggcGCTTTTAATTTCAGCCTCTTCCTCCGACAAAATctcttagcccccc
cccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcca
tttaattatttttgaagatattttcagttttctTCCCTGGGTATTGTAAA
ATAGAAATATTTCAGATATTTTACACGTATGTTATACATCTATACACTTG
TATACATGGATCTCCCTCTTGCATATACAAgcattttaaaatgaaacaaa
agaaagagaAGCCTATACTAatgtcacccgcgttttttctacgcaaaatg
caagaaacgagatgaaaaatcctggtttttagtgaggtgctcgctaaagA
AAGAGCAATTTATTCCTCCTCCGTGCGAgcaaataattattttgttcATT
CTGGCTAGTCAGCATAAGAGGTGCGTCTACTTTCTAtatcatcataaaaa
aagaTTATATTCAATAAACATTTTCTACCGTGATAATATCGGTGATAAAC
TCTTTATTACTCTCAGTCTCTTCGAAACCATCGTATACCCCTTGGAACTG
GCTATTTTCCTTCGACGTCAAAATGGCCGGTGCCGACGGGAACGACCAAC
GAACAGGAGAAATTATTCGTGTTACCGATAAAGGCGATATCAATTCCATT
GTTTTAAGTGTGGAAAAAAACACTCACAACCAACTGACATTGACTTTCAA
ACGTGACGGAACTCAACATCACAAACTCATCACTGTACAAAATCATGATA
GCATAATATTGAGTAAGTTCAATGAAtaacctcgttccctgtgtatCGAC
GACCTTTTTATGCTTACTCACTTAcagatagcgctagataattccCTAGC
ATTAACGCGAGATTATGTAttggaggatatcgagggcgacggtaataTAA
TAGATAAGTCGATATGTACTCTCAAAATTGCCGTGAATGGATTAgatcaa
aattatttcttccTCGGGCCATGTGCTTTGGttaaaaaacacccctgtct
cacagccccggtggtaCTTCCAGGGGGTGTTAAAGACACCCCCTGGTACT
TTTTACCACAGTGGGGAATATCGAAAATCGAAATCCCAAtagggatagaa
attatattgttccaaagttgaaaaatccagtggggacggttttggagtgc
aacttttccattgaaattcgattgggaTAAGggatttttccagtggggct
gaaattgtagggtatttttcccagcGGGACGAAAATTTAGTTGATAGGGA
GTCTCACtggatctgtgacacaggggtgtgaaaatatactttttatataa
ttttcttCTTAGATTTTACACGGAGCCGTGATACAGACAATCAACagagt
ttagaaatcaaaaccTCAACAAATAATCTCTGGTTTTCTGGTTCCAATCC
AGTCTCAACTTTCAGTGATACAAACCTTGATGCTCGTGAAATCAAAGTTT
TTTATGCAAAAGGATTTGCAAGTAATATTCAAACCATATCGAGTGTTCCA
AGCTATACGCCAGGTTGGTCAAAGATTAATAacacaattgattttttaat
aagaaccaataaatttttaaacttctcttaattttttgaaactttcaggc
ttccaaaatgttcttacgatgttcttaatacaCTTAGTTTCTTTacataa
aaacttaaaatgggtttaaaatctgttaaaatcagtactttttaagtaat
ttctgaaatctgaggctcaggattattttttaatttggttttagtttttg
gccaattttcagcctcgtgttgttataaaattgttcttaaaaaaagcgtg
tatttcatggtattttaacttttaaaggaagaaaatacaacatttttgaa
gtGGGAGAGACCCTGAACCCAAGCCCTCGTTTGCAGGATTGTTGCGTCCG
CCCAAAATACGTAAACATAACCCAGCTGACAtacaacgttctttcaacgt
tttTATAACATTCGttcaacgttgaaacaacgttgtgtgtcagctgcgAA
ACGTCGAACCATCTTCCTTCCATACACAAATTATAAAATAGTGATGGGTT
CTATCTAGTAACAGCATTACGTGTCTGAAGCCTTTCTATGTAGCGTTTTG
ATTTCCGCTAGCAATTTTACATTTCCGTAAATCTATTCCCCGGTAATATG
TTTTAGTTTGCATCAACATTGTTAGCCTAAAAACAGATGATATTGGTAAT
TCTTGCCCCACTGATTTGTCTCTATGAcattttagatttaaaaaatacgC
TGAAGAAAACTTACGCATTCCTCCACATTGAATTTTGAGTGATCGgtcat
ctttcaaaatttttggtatTTCAGAAGCGACTCTGCTATTTCTCAGGTTA
TGGAAGACTATTTTGAAATTagacaaatatttcattttcagtttttacGA
GAAACATTtccaaagattttcaaagatttttgcaAATTAGTCCATGGTGA
GATTTGAACCACCAACCCGCTGCTCTACCGATTTCAAAGATTGTCAAAGG
TCTTTCCGCGTATCACAGAAATCGTATACTTTCCGGGATTTGCAGAAATC
TAGCCTATGCTAGACGTCACCTGCGtatttttctacgcaattataACGTC
TATTCTACTTCTACTTTTTCCAAATGTTTGGAGCTCAGGTTTTCGGGCTA
AACATGAGGCACATTCTGGTAAGTGTTTCAAAGAAATCATACATTTTCGG
TGTTTTACATAAATCGTCTGTAACAAAAAGTGAcggtagtgcagtggtag
agcatccggctacggtgcgcaaggttgtagGTCATAACCCCCAGCCGTgg
cataccaaagatttccaaaatggtactcgattcctctctgcttgatgctc
agcaattaagagaaggatcaagggtaagtggagcaatccaggaagAAAGA
GTGCAGCCGTCCGCTACCTTTTAATCCAAAGAGGAGCCATCGGGTtacct
ccgactgcggtcgcagattTACTTACTTAAATTTTCTGATATATTTTTAT
GTTAACAGAGCAAGCAATTGAGGTTTGTTACGATGAATGCAGAAAGACAT
GCGCCACTGATATTCACCCAACAAATGGATGTAATCAAATGTTCCACTGT
CCTCATACATGTAAGATGCGAGAATTGGGTCGCTCGGTAACAGAGTGTAA
AGCTTCTTGCCAGAGAACTCCTTCTTCGGGTTGCAGTGTTTCGTACCTTA
CCATCAACTTTAATCTTTGTGGGGCATGTAATCGGGCCGAGTGTCCAACT
CTCGGACCGGCTATCTCCGAATGTGAAAAGGGATGTGAATCATATCCTAT
GTAAGCGCTGGATccccagctagcacacaacgttgtttcatcgttaatct
aatgttcacaacgtccatataacgttagatgtacgttgaaacaacgttga
aaTCTCTGGCTATTAGTGGTAACCACAGCTGGCACTCAACTCACTTGATT
TTCCCGACCTAAACTTTTTTTCGTGTCATAAAAAAGTCTTTGTACGCGTA
TAAGTTCacatttaatttgattttaaaaattttatttgcacTCTAttcgt
aaaatattttttttcatttaagtaTTTGCGCTATATtcgtaaaatattta
tttatgcCAAATAAAACCCACAATTCTTTCCTTCTCACTAGAGATTTAAC
TCAGCCTGCGTGGAAAAGGAGCTACTAAGTTCTGCCACTTAAAACATGCA
AATATATTGAGTGAAGCAATTGTAAGTTAAGCAGTTCAAATTTTGGTTTA
CATAGAAATTATTATGTTCCATTTATTTGTAAATCTTGTACATAGAAACT
ATAActtaacaatttttttcataatttcctCTAAAATCtgttattcaact
ttttttataaactagGGGAATCTCCATGTTTTAtgaactttttttctctt
ttgggAGATTCACTTGCTCTCACGTTGAGAAACTCCTACTGTGGTCACTC
GGCCTGACGTGGGGTCCACACATAAGTCCTCTGGAGGCAAGACCGAAAAA
AATTACTCCGGATAGGCCCCAAGTGGTCTAGCGCGGTCATTCCTCCAGGG
CAAAATAACGACCcctagatttttttttgttgtcattCTAGCCTTTGTCT
TTCTGTTTATCttatttatttaacatttttaaaattttgaaagttgaaGA
ATTTGTGTTTTCGTCATTTTAAATCTTATgttgtctttttattttaataa
tttgCAGATTCGCAACATCGT

Coding sequence (CDS) from alignment at sc0001402:8116..14586+

>TCONS_00036011 ID=TCONS_00036011|Name=TCONS_00036011|organism=Clytia hemisphaerica|type=CDS|length=6714bp|location=Sequence derived from alignment at sc0001402:8116..14586+ (Clytia hemisphaerica)
ATGTTGAATGGCTGCTTCTTCTTAAGGTTGTCTATCATTTCTGCGTTATC
TTACGAAGTGAGCGCCTTCTCCGCTTCATTTACGAATGCTTTGAAAGACA
CAAAAACAACAGATGAAAATGCCATCGTGCTCCAAAAGCCAAACATTGGA
CACTGTTTGGCCGCATGCAATTTCGTTGAAGGTGGATGTCAATCGATCAG
TTGGCATGGCGATGATAAGATTTGTCAGATCGTCAAAAATGACGGCACTG
AAAATGATGGAGATAATGAATTGACGGGTTTTGCTTCTGGATGGGTTTAT
TACCGGAAAAATGAACAACCGACTGATTTCGATCAAACATTTATGAAGTC
AGAAGAAGTGCTAATCGACAAAGAAGTCTCTTCGAAACCATCGTATACCC
CTTGGAACTGGCTATTTTCCTTCGACGTCAAAATGGCCGGTGCCGACGGG
AACGACCAACGAACAGGAGAAATTATTCGTGTTACCGATAAAGGCGATAT
CAATTCCATTGTTTTAAGTGTGGAAAAAAACACTCACAACCAACTGACAT
TGACTTTCAAACGTGACGGAACTCAACATCACAAACTCATCACTGTACAA
AATCATGATAGCATAATATTGAATTTTACACGGAGCCGTGATACAGACAA
TCAACagagtttagaaatcaaaaccTCAACAAATAATCTCTGGTTTTCTG
GTTCCAATCCAGTCTCAACTTTCAGTGATACAAACCTTGATGCTCGTGAA
ATCAAAGTTTTTTATGCAAAAGGATTTGCAAGTAATATTCAAACCATATC
GAGTGTTCCAAGCTATACGCCAGAGCAAGCAATTGAGGTTTGTTACGATG
AATGCAGAAAGACATGCGCCACTGATATTCACCCAACAAATGGATGTAAT
CAAATGTTCCACTGTCCTCATACATGTAAGATGCGAGAATTGGGTCGCTC
GGTAACAGAGTGTAAAGCTTCTTGCCAGAGAACTCCTTCTTCGGGTTGCA
GTGTTTCGTACCTTACCATCAACTTTAATCTTTGTGGGGCATGTAATCGG
GCCGAGTGTCCAACTCTCGGACCGGCTATCTCCGAATGTGAAAAGGGATG
TGAATCATATCCTATGTAAATGTTGAATGGCTGCTTCTTCTTAAGGTTGT
CTATCATTTCTGCGTTATCTTACGAAGTGAGCGCCTTCTCCGCTTCATTT
ACGAATGCTTTGAAAGACACAAAAACAACAGATGAAAATGCCATCGTGCT
CCAAAAGCCAAACATTGGACACTGTTTGGCCGCATGCAATTTCGTTGAAG
GTGGATGTCAATCGATCAGTTGGCATGGCGATGATAAGATTTGTCAGATC
GTCAAAAATGACGGCACTGAAAATGATGGAGATAATGAATTGACGGGTTT
TGCTTCTGGATGGGTTTATTACCGGAAAAATGAACAACCGACTGATTTCG
ATCAAACATTTATGAAGTCAGAAGAAGTGCTAATCGACAAAGAAGTCTCT
TCGAAACCATCGTATACCCCTTGGAACTGGCTATTTTCCTTCGACGTCAA
AATGGCCGGTGCCGACGGGAACGACCAACGAACAGGAGAAATTATTCGTG
TTACCGATAAAGGCGATATCAATTCCATTGTTTTAAGTGTGGAAAAAAAC
ACTCACAACCAACTGACATTGACTTTCAAACGTGACGGAACTCAACATCA
CAAACTCATCACTGTACAAAATCATGATAGCATAATATTGAATTTTACAC
GGAGCCGTGATACAGACAATCAACagagtttagaaatcaaaaccTCAACA
AATAATCTCTGGTTTTCTGGTTCCAATCCAGTCTCAACTTTCAGTGATAC
AAACCTTGATGCTCGTGAAATCAAAGTTTTTTATGCAAAAGGATTTGCAA
GTAATATTCAAACCATATCGAGTGTTCCAAGCTATACGCCAGAGCAAGCA
ATTGAGGTTTGTTACGATGAATGCAGAAAGACATGCGCCACTGATATTCA
CCCAACAAATGGATGTAATCAAATGTTCCACTGTCCTCATACATGTAAGA
TGCGAGAATTGGGTCGCTCGGTAACAGAGTGTAAAGCTTCTTGCCAGAGA
ACTCCTTCTTCGGGTTGCAGTGTTTCGTACCTTACCATCAACTTTAATCT
TTGTGGGGCATGTAATCGGGCCGAGTGTCCAACTCTCGGACCGGCTATCT
CCGAATGTGAAAAGGGATGTGAATCATATCCTATGTAAATGTTGAATGGC
TGCTTCTTCTTAAGGTTGTCTATCATTTCTGCGTTATCTTACGAAGTGAG
CGCCTTCTCCGCTTCATTTACGAATGCTTTGAAAGACACAAAAACAACAG
ATGAAAATGCCATCGTGCTCCAAAAGCCAAACATTGGACACTGTTTGGCC
GCATGCAATTTCGTTGAAGGTGGATGTCAATCGATCAGTTGGCATGGCGA
TGATAAGATTTGTCAGATCGTCAAAAATGACGGCACTGAAAATGATGGAG
ATAATGAATTGACGGGTTTTGCTTCTGGATGGGTTTATTACCGGAAAAAT
GAACAACCGACTGATTTCGATCAAACATTTATGAAGTCAGAAGAAGTGCT
AATCGACAAAGAAGTCTCTTCGAAACCATCGTATACCCCTTGGAACTGGC
TATTTTCCTTCGACGTCAAAATGGCCGGTGCCGACGGGAACGACCAACGA
ACAGGAGAAATTATTCGTGTTACCGATAAAGGCGATATCAATTCCATTGT
TTTAAGTGTGGAAAAAAACACTCACAACCAACTGACATTGACTTTCAAAC
GTGACGGAACTCAACATCACAAACTCATCACTGTACAAAATCATGATAGC
ATAATATTGAATTTTACACGGAGCCGTGATACAGACAATCAACagagttt
agaaatcaaaaccTCAACAAATAATCTCTGGTTTTCTGGTTCCAATCCAG
TCTCAACTTTCAGTGATACAAACCTTGATGCTCGTGAAATCAAAGTTTTT
TATGCAAAAGGATTTGCAAGTAATATTCAAACCATATCGAGTGTTCCAAG
CTATACGCCAGAGCAAGCAATTGAGGTTTGTTACGATGAATGCAGAAAGA
CATGCGCCACTGATATTCACCCAACAAATGGATGTAATCAAATGTTCCAC
TGTCCTCATACATGTAAGATGCGAGAATTGGGTCGCTCGGTAACAGAGTG
TAAAGCTTCTTGCCAGAGAACTCCTTCTTCGGGTTGCAGTGTTTCGTACC
TTACCATCAACTTTAATCTTTGTGGGGCATGTAATCGGGCCGAGTGTCCA
ACTCTCGGACCGGCTATCTCCGAATGTGAAAAGGGATGTGAATCATATCC
TATGTAAATGTTGAATGGCTGCTTCTTCTTAAGGTTGTCTATCATTTCTG
CGTTATCTTACGAAGTGAGCGCCTTCTCCGCTTCATTTACGAATGCTTTG
AAAGACACAAAAACAACAGATGAAAATGCCATCGTGCTCCAAAAGCCAAA
CATTGGACACTGTTTGGCCGCATGCAATTTCGTTGAAGGTGGATGTCAAT
CGATCAGTTGGCATGGCGATGATAAGATTTGTCAGATCGTCAAAAATGAC
GGCACTGAAAATGATGGAGATAATGAATTGACGGGTTTTGCTTCTGGATG
GGTTTATTACCGGAAAAATGAACAACCGACTGATTTCGATCAAACATTTA
TGAAGTCAGAAGAAGTGCTAATCGACAAAGAAGTCTCTTCGAAACCATCG
TATACCCCTTGGAACTGGCTATTTTCCTTCGACGTCAAAATGGCCGGTGC
CGACGGGAACGACCAACGAACAGGAGAAATTATTCGTGTTACCGATAAAG
GCGATATCAATTCCATTGTTTTAAGTGTGGAAAAAAACACTCACAACCAA
CTGACATTGACTTTCAAACGTGACGGAACTCAACATCACAAACTCATCAC
TGTACAAAATCATGATAGCATAATATTGAATTTTACACGGAGCCGTGATA
CAGACAATCAACagagtttagaaatcaaaaccTCAACAAATAATCTCTGG
TTTTCTGGTTCCAATCCAGTCTCAACTTTCAGTGATACAAACCTTGATGC
TCGTGAAATCAAAGTTTTTTATGCAAAAGGATTTGCAAGTAATATTCAAA
CCATATCGAGTGTTCCAAGCTATACGCCAGAGCAAGCAATTGAGGTTTGT
TACGATGAATGCAGAAAGACATGCGCCACTGATATTCACCCAACAAATGG
ATGTAATCAAATGTTCCACTGTCCTCATACATGTAAGATGCGAGAATTGG
GTCGCTCGGTAACAGAGTGTAAAGCTTCTTGCCAGAGAACTCCTTCTTCG
GGTTGCAGTGTTTCGTACCTTACCATCAACTTTAATCTTTGTGGGGCATG
TAATCGGGCCGAGTGTCCAACTCTCGGACCGGCTATCTCCGAATGTGAAA
AGGGATGTGAATCATATCCTATGTAAATGTTGAATGGCTGCTTCTTCTTA
AGGTTGTCTATCATTTCTGCGTTATCTTACGAAGTGAGCGCCTTCTCCGC
TTCATTTACGAATGCTTTGAAAGACACAAAAACAACAGATGAAAATGCCA
TCGTGCTCCAAAAGCCAAACATTGGACACTGTTTGGCCGCATGCAATTTC
GTTGAAGGTGGATGTCAATCGATCAGTTGGCATGGCGATGATAAGATTTG
TCAGATCGTCAAAAATGACGGCACTGAAAATGATGGAGATAATGAATTGA
CGGGTTTTGCTTCTGGATGGGTTTATTACCGGAAAAATGAACAACCGACT
GATTTCGATCAAACATTTATGAAGTCAGAAGAAGTGCTAATCGACAAAGA
AGTCTCTTCGAAACCATCGTATACCCCTTGGAACTGGCTATTTTCCTTCG
ACGTCAAAATGGCCGGTGCCGACGGGAACGACCAACGAACAGGAGAAATT
ATTCGTGTTACCGATAAAGGCGATATCAATTCCATTGTTTTAAGTGTGGA
AAAAAACACTCACAACCAACTGACATTGACTTTCAAACGTGACGGAACTC
AACATCACAAACTCATCACTGTACAAAATCATGATAGCATAATATTGAAT
TTTACACGGAGCCGTGATACAGACAATCAACagagtttagaaatcaaaac
cTCAACAAATAATCTCTGGTTTTCTGGTTCCAATCCAGTCTCAACTTTCA
GTGATACAAACCTTGATGCTCGTGAAATCAAAGTTTTTTATGCAAAAGGA
TTTGCAAGTAATATTCAAACCATATCGAGTGTTCCAAGCTATACGCCAGA
GCAAGCAATTGAGGTTTGTTACGATGAATGCAGAAAGACATGCGCCACTG
ATATTCACCCAACAAATGGATGTAATCAAATGTTCCACTGTCCTCATACA
TGTAAGATGCGAGAATTGGGTCGCTCGGTAACAGAGTGTAAAGCTTCTTG
CCAGAGAACTCCTTCTTCGGGTTGCAGTGTTTCGTACCTTACCATCAACT
TTAATCTTTGTGGGGCATGTAATCGGGCCGAGTGTCCAACTCTCGGACCG
GCTATCTCCGAATGTGAAAAGGGATGTGAATCATATCCTATGTAAATGTT
GAATGGCTGCTTCTTCTTAAGGTTGTCTATCATTTCTGCGTTATCTTACG
AAGTGAGCGCCTTCTCCGCTTCATTTACGAATGCTTTGAAAGACACAAAA
ACAACAGATGAAAATGCCATCGTGCTCCAAAAGCCAAACATTGGACACTG
TTTGGCCGCATGCAATTTCGTTGAAGGTGGATGTCAATCGATCAGTTGGC
ATGGCGATGATAAGATTTGTCAGATCGTCAAAAATGACGGCACTGAAAAT
GATGGAGATAATGAATTGACGGGTTTTGCTTCTGGATGGGTTTATTACCG
GAAAAATGAACAACCGACTGATTTCGATCAAACATTTATGAAGTCAGAAG
AAGTGCTAATCGACAAAGAAGTCTCTTCGAAACCATCGTATACCCCTTGG
AACTGGCTATTTTCCTTCGACGTCAAAATGGCCGGTGCCGACGGGAACGA
CCAACGAACAGGAGAAATTATTCGTGTTACCGATAAAGGCGATATCAATT
CCATTGTTTTAAGTGTGGAAAAAAACACTCACAACCAACTGACATTGACT
TTCAAACGTGACGGAACTCAACATCACAAACTCATCACTGTACAAAATCA
TGATAGCATAATATTGAATTTTACACGGAGCCGTGATACAGACAATCAAC
agagtttagaaatcaaaaccTCAACAAATAATCTCTGGTTTTCTGGTTCC
AATCCAGTCTCAACTTTCAGTGATACAAACCTTGATGCTCGTGAAATCAA
AGTTTTTTATGCAAAAGGATTTGCAAGTAATATTCAAACCATATCGAGTG
TTCCAAGCTATACGCCAGAGCAAGCAATTGAGGTTTGTTACGATGAATGC
AGAAAGACATGCGCCACTGATATTCACCCAACAAATGGATGTAATCAAAT
GTTCCACTGTCCTCATACATGTAAGATGCGAGAATTGGGTCGCTCGGTAA
CAGAGTGTAAAGCTTCTTGCCAGAGAACTCCTTCTTCGGGTTGCAGTGTT
TCGTACCTTACCATCAACTTTAATCTTTGTGGGGCATGTAATCGGGCCGA
GTGTCCAACTCTCGGACCGGCTATCTCCGAATGTGAAAAGGGATGTGAAT
CATATCCTATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021166XLOC_021166Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036011-proteinTCONS_00036011-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036011-exon-sc0001402-1491911889:8116..8286TCONS_00036011-exon-sc0001402-1491911889:8116..8286Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:8116..8286TCONS_00036011-exon-sc0001402-1510915933:8116..8286Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:8116..8286TCONS_00036011-exon-sc0001402-1575043694:8116..8286Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1491911889:9267..9561TCONS_00036011-exon-sc0001402-1491911889:9267..9561Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:9267..9561TCONS_00036011-exon-sc0001402-1510915933:9267..9561Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:9267..9561TCONS_00036011-exon-sc0001402-1575043694:9267..9561Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1491911889:9928..9982TCONS_00036011-exon-sc0001402-1491911889:9928..9982Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:9928..9982TCONS_00036011-exon-sc0001402-1510915933:9928..9982Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:9928..9982TCONS_00036011-exon-sc0001402-1575043694:9928..9982Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1491911889:10882..11127TCONS_00036011-exon-sc0001402-1491911889:10882..11127Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:10882..11127TCONS_00036011-exon-sc0001402-1510915933:10882..11127Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:10882..11127TCONS_00036011-exon-sc0001402-1575043694:10882..11127Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1491911889:11678..11878TCONS_00036011-exon-sc0001402-1491911889:11678..11878Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:11678..11878TCONS_00036011-exon-sc0001402-1510915933:11678..11878Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:11678..11878TCONS_00036011-exon-sc0001402-1575043694:11678..11878Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1491911889:13374..14586TCONS_00036011-exon-sc0001402-1491911889:13374..14586Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1510915933:13374..14586TCONS_00036011-exon-sc0001402-1510915933:13374..14586Clytia hemisphaericaexon
TCONS_00036011-exon-sc0001402-1575043694:13374..14586TCONS_00036011-exon-sc0001402-1575043694:13374..14586Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001402supercontigsc0001402:8116..14586 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0768845	0.0209378	0	0.0199316	0.597995	0.371461	0.16191	0	0.105711	0.136905	0.127621	0.0754622	4.11671	4.3705	1.51759	0.855145	0.394776	0.511526	8.16474	5.97036	1.85749	1.30042	0.375748	0.715754	1.03474	1.31569	0	0	0.0940546	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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