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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036002 ID=TCONS_00036002|Name=TCONS_00036002|organism=Clytia hemisphaerica|type=transcript|length=862bp
gcaaaacgttcgaatttactCGTGTAACACTCGAAATCTCCCACAATACT
TTCAAATGTAATTAACGGCCTTTCAACATAtcttacttgaacaaaaaata
ataattttttgcaGTATGAATTGGGCGATATTGggggaaaataaataaac
actaTAAACAtacaggagggaataaacgtacaggcgggaaattcttcaga
ataaataaacgaacagttcctaataaggtgcgtacaggcgggaaatttga
cacgaaaaaacgtttattaggcacccgagagtaccaTGCCAATCTTCAAA
TGAAGCATTGTTTATTTTCCCCAATTTTTCAAGGCAATGTTAGCAATAGT
GTCATATTaacacatttttcagattttaataaTCAAGggtgtttaaattt
cttttgaacAAAAAGGTATGTCAACCTAATGGGTAAAAGCATGTAATGTA
AATTATTAAAATGATCAGTTTTTCGGTAAAAAAATTGGGGGTTGGGAAAC
AAAGACTGAAGATCTGACACTCATCTCAACTTAATTGAGGTCCGTTGTGC
AATCATGCCTTCTTTGTACTGTTTTTATTGAAAAAAAAATTGCTTCAATA
TAAAGAATGAAGTCCTGACACTCGCCTCAACTATTTCACGAGGTCCGTTT
TGTGCGCTCATGCATTCTTTGTATATCAATGAAGTAATAAAACAAACTGA
CCACATTTACAGTTACTAGATCCATGTCTTGTTTTGTAGTGGGTACCAGA
GAAAAGAGTAAACTTCATGTCAGTAAATGAAATTCATCATGCATTAAATA
AGAAGGCAGATTTTGCTTATTATGGCAATCTATAAATGAAATGTGGTTTA
TTTTTCCCCAAG Run BLAST on NCBI transcript from alignment at sc0001401:56427..57955+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036002 ID=TCONS_00036002|Name=TCONS_00036002|organism=Clytia hemisphaerica|type=transcript|length=1529bp|location=Sequence derived from alignment at sc0001401:56427..57955+ (Clytia hemisphaerica)
gcaaaacgttcgaatttactCGTGTAACACTCGAAATCTCCCACAATACT
TTCAAATGTAATTAACGGCCTTTCAACATAtcttacttgaacaaaaaata
ataattttttgcaGTATGAATTGGGCGATATTGggggaaaataaataaac
actaTAAACAtacaggagggaataaacgtacaggcgggaaattcttcaga
ataaataaacgaacagttcctaataaggtgcgtacaggcgggaaatttga
cacgaaaaaacgtttattaggcacccgagagtaccaTGCCAATCTTCAAA
TGAAGCATTGTTTATTTTCCCCAATTTTTCAAGGCAATGTTAGCAATAGT
GTCATATTaacacatttttcaaattttcataatcaagggtgtttaaattt
cttttgaacAAAAAGGTATGTCAACCTAATAGGTAAAAGCATGTAATGTA
AATTATTAAAATGATCAGTTTTTCGGTAAAAAAATNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAGAATGAAGTCCTGA
CACTCGCCTCAACTATTTCACGAGGTCCGTTTTGTGCGCTCATGCATTCT
TTGTATAACAATGAAGCAATAAAACAAACTGACCACCATTACATTTACTA
GATCCATGACTTGTTTTGTAGTGGGTACCAGAGAAAAGAGTAACATACCA
GCAGATAGAATTTATTATGCATATTAAGTAAGATAGCAGACTTTGCCTAC
CATGCCAATCTGCAAATGGAGCATTGTTtatttttccccaatttttcAAG
GTAATGTTAGCAGCAATGTCTTATTAAcacatttttcagattttaataaT
CAAGggtgtttaaatttcttttgaacAAAAAGGTATGTCAACCTAATGGG
TAAAAGCATGTAATGTAAATTATTAAAATGATCAGTTTTTCGGTAAAAAA
ATTGGGGGTTGGGAAACAAAGACTGAAGATCTGACACTCATCTCAACTTA
ATTGAGGTCCGTTGTGCAATCATGCCTTCTTTGTACTGTTTTTATTGAAA
AAAAAATTGCTTCAATATAAAGAATGAAGTCCTGACACTCGCCTCAACTA
TTTCACGAGGTCCGTTTTGTGCGCTCATGCATTCTTTGTATATCAATGAA
GTAATAAAACAAACTGACCACATTTACAGTTACTAGATCCATGTCTTGTT
TTGTAGTGGGTACCAGAGAAAAGAGTAAACTTCATGTCAGTAAATGAAAT
TCATCATGCATTAAATAAGAAGGCAGATTTTGCTTATTATGGCAATCTAT
AAATGAAATGTGGTTTATTTTTCCCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036002-exon-sc0001401-1491911889:56427..56789 | TCONS_00036002-exon-sc0001401-1491911889:56427..56789 | Clytia hemisphaerica | exon |
| TCONS_00036002-exon-sc0001401-1510915933:56427..56789 | TCONS_00036002-exon-sc0001401-1510915933:56427..56789 | Clytia hemisphaerica | exon |
| TCONS_00036002-exon-sc0001401-1575043694:56427..56789 | TCONS_00036002-exon-sc0001401-1575043694:56427..56789 | Clytia hemisphaerica | exon |
| TCONS_00036002-exon-sc0001401-1491911889:57457..57955 | TCONS_00036002-exon-sc0001401-1491911889:57457..57955 | Clytia hemisphaerica | exon |
| TCONS_00036002-exon-sc0001401-1510915933:57457..57955 | TCONS_00036002-exon-sc0001401-1510915933:57457..57955 | Clytia hemisphaerica | exon |
| TCONS_00036002-exon-sc0001401-1575043694:57457..57955 | TCONS_00036002-exon-sc0001401-1575043694:57457..57955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001401 | supercontig | sc0001401:56427..57955 + |
Blast
The following BLAST results are available for this feature:
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