TCONS_00035962 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035962
Unique NameTCONS_00035962
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035962 ID=TCONS_00035962|Name=TCONS_00035962|organism=Clytia hemisphaerica|type=transcript|length=271bp
cataCCTGCCCATGTTCCAAACTTTTTCTTGAGGTTCACACGAAAAGCTG
CATACTTTGGTAACACATATAATCTCAATAATCTCCAAATGAAACCAATG
AAATCAAATACACATTTGCCCACCAGCAACCAAACAAtgtattttattaa
aaagtctatcattttttcttttacttttctgaaaagaaaacaaaagtttg
AAATTGTAAAGAGCATGAGTTAGTAGTATCTTTGACTTAGAGCGAGATAT
GATGAAAGTGGACGATGAAAG
Run BLAST on NCBI

transcript from alignment at sc0001395:29394..29751+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035962 ID=TCONS_00035962|Name=TCONS_00035962|organism=Clytia hemisphaerica|type=transcript|length=358bp|location=Sequence derived from alignment at sc0001395:29394..29751+ (Clytia hemisphaerica)
cataCCTGCCCATGTTCCAAACTTTTTCTTGAGGTTCACACGAAAAGCTG
CATACTTTGGTAACACATATAATCTCAATAATCTCCAAATGAAACCAATG
AAATCAAATACACATTTGCCCACCAACAACCAACCAatgtattttattaa
aaattctatCATTTTTTCTTTNCAAATGAAACCAATGAAATCAAATACAC
ATTTGCCCACCAGCAACCAAACAAtgtattttattaaaaagtctatcatt
ttttcttttacttttctgaaaagaaaacaaaagtttgAAATTGTAAAGAG
CATGAGTTAGTAGTATCTTTGACTTAGAGCGAGATATGATGAAAGTGGAC
GATGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021124XLOC_021124Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035962-exon-sc0001395-1491911889:29394..29506TCONS_00035962-exon-sc0001395-1491911889:29394..29506Clytia hemisphaericaexon
TCONS_00035962-exon-sc0001395-1510915933:29394..29506TCONS_00035962-exon-sc0001395-1510915933:29394..29506Clytia hemisphaericaexon
TCONS_00035962-exon-sc0001395-1575043694:29394..29506TCONS_00035962-exon-sc0001395-1575043694:29394..29506Clytia hemisphaericaexon
TCONS_00035962-exon-sc0001395-1491911889:29594..29751TCONS_00035962-exon-sc0001395-1491911889:29594..29751Clytia hemisphaericaexon
TCONS_00035962-exon-sc0001395-1510915933:29594..29751TCONS_00035962-exon-sc0001395-1510915933:29594..29751Clytia hemisphaericaexon
TCONS_00035962-exon-sc0001395-1575043694:29594..29751TCONS_00035962-exon-sc0001395-1575043694:29594..29751Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001395supercontigsc0001395:29394..29751 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035962 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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