TCONS_00035938 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035938
Unique NameTCONS_00035938
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035938 ID=TCONS_00035938|Name=TCONS_00035938|organism=Clytia hemisphaerica|type=transcript|length=185bp
AGGAAACATTTTACGACTACCTGGAGAAGTTTTTATTGAACGACGGTCAG
CTCTGGGAGAACAAATATCCACGTTGGAACTTTCAAGATTCTTCCATGGT
GGAAGTCAAAGATTTTTTACCAGCTATTAATCcaCTCCGTCGCACGTGTT
GCCGATGTGGTAAAGAATACTTTATGAACAAGAAA
Run BLAST on NCBI

transcript from alignment at sc0001391:70191..70604-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035938 ID=TCONS_00035938|Name=TCONS_00035938|organism=Clytia hemisphaerica|type=transcript|length=414bp|location=Sequence derived from alignment at sc0001391:70191..70604- (Clytia hemisphaerica)
AGGAAACATTTTACGACTACCTGGAGAAGTTTTTATTGAACGACGGTCAG
CTCTGGGAGAACAAATATCCACGTTGGAACTTTCAAGATTCTTCCATGGT
GGAAGTCAAAGATTTTTTACCAGCTATTAATCGTAAGTGTTTTCTTGTTC
GCTTGCGTTCGTTCGTTCGTTTGTCTAACTGTGCAACCTCATCAAAATTA
TTGGAATAAAAGTAAATCTAGCCCTCTCTATGTATTTACACCGCTATTTG
AGTAGTGCTACCATTAGGTATCGCTTTCAAAAAACTCTGATCAAAAATTT
TGGTTGACCGGGATCGAGAAATTGTCTCCAGAGTCTATGTATAACTTCAA
TTTTATTTTAGCACTCCGTCGCACGTGTTGCCGATGTGGTAAAGAATACT
TTATGAACAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021103XLOC_021103Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035938-exon-sc0001391-1575043694:70473..70604TCONS_00035938-exon-sc0001391-1575043694:70473..70604Clytia hemisphaericaexon
TCONS_00035938-exon-sc0001391-1575043694:70191..70243TCONS_00035938-exon-sc0001391-1575043694:70191..70243Clytia hemisphaericaexon
TCONS_00035938-exon-sc0001391-1510915933:70473..70604TCONS_00035938-exon-sc0001391-1510915933:70473..70604Clytia hemisphaericaexon
TCONS_00035938-exon-sc0001391-1510915933:70191..70243TCONS_00035938-exon-sc0001391-1510915933:70191..70243Clytia hemisphaericaexon
TCONS_00035938-exon-sc0001391-1491911889:70473..70604TCONS_00035938-exon-sc0001391-1491911889:70473..70604Clytia hemisphaericaexon
TCONS_00035938-exon-sc0001391-1491911889:70191..70243TCONS_00035938-exon-sc0001391-1491911889:70191..70243Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001391supercontigsc0001391:70191..70604 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035938 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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